Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1547

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,774,444	-		Echvi_1546	0.47	+0.5
1,774,565	-		Echvi_1546	0.58	+0.6
1,774,600	-		Echvi_1546	0.61	-1.7
1,774,726	+		Echvi_1546	0.72	-0.9
1,774,785	+		Echvi_1546	0.77	-0.2
1,774,816	+		Echvi_1546	0.80	-0.3
1,774,816	+		Echvi_1546	0.80	-0.5
1,774,863	+		Echvi_1546	0.84	-1.4
1,774,863	+		Echvi_1546	0.84	-0.6
1,774,867	-		Echvi_1546	0.84	+0.7
1,774,875	+		Echvi_1546	0.85	-0.8
1,774,903	-		Echvi_1546	0.88	-0.3
1,774,903	-				+2.1
1,775,015	-				-0.0
1,775,091	-				-2.0
1,775,112	+				+0.2
1,775,112	+				-0.9
1,775,113	-				+0.6
1,775,164	+				-0.8
1,775,164	+				-0.3
1,775,286	+				-2.5
1,775,286	+				-1.1
1,775,286	+				-0.1
1,775,296	+				-2.2
1,775,315	+				+0.7
1,775,320	+				-1.2
1,775,402	+		Echvi_1547	0.38	+1.7
1,775,402	+		Echvi_1547	0.38	+1.7
1,775,403	-		Echvi_1547	0.39	+0.3
1,775,415	-		Echvi_1547	0.46	+1.8
1,775,429	+		Echvi_1547	0.54	+1.3
1,775,429	+		Echvi_1547	0.54	+0.8
1,775,492	+		Echvi_1547	0.89	-0.1
1,775,492	+		Echvi_1547	0.89	+1.4
1,775,493	-				+0.8
1,775,493	-				-1.7
1,775,493	-				+1.4
1,775,493	-				+0.8
1,775,522	-				-1.7
1,775,530	+				+2.1
1,775,594	-				+0.6
1,775,605	+				+1.1
1,775,605	+				-0.6
1,775,606	-				+0.9
1,775,606	-				-0.2
1,775,620	+				-0.6
1,775,620	+				+0.8
1,775,621	-				+0.0
1,775,624	+				+0.6
1,775,624	+				+0.6
1,775,624	+				-1.4
1,775,624	+				+0.6
1,775,624	+				+0.6
1,775,625	-				+1.0
1,775,625	-				-1.2
1,775,625	-				-1.0
1,775,703	+				+0.6
1,775,703	+				-0.8
1,775,770	+				-0.4
1,775,770	+				+1.3
1,775,771	-				-0.3
1,775,775	-				-0.2
1,775,817	+				-0.4
1,775,967	+				-1.4
1,775,971	+				+0.6
1,776,021	+				-1.2
1,776,022	-				-0.8
1,776,022	-				-0.4
1,776,025	+				-1.7
1,776,085	-				+1.4
1,776,097	-				-0.2
1,776,184	-				+0.5
1,776,211	-				-0.9
1,776,218	+				+0.1
1,776,241	-				-0.3
1,776,309	-		Echvi_1548	0.21	-0.2
1,776,309	-		Echvi_1548	0.21	+0.7
1,776,309	-		Echvi_1548	0.21	-1.5
1,776,309	-		Echvi_1548	0.21	+0.3
1,776,359	-		Echvi_1548	0.32	-0.3
1,776,363	-		Echvi_1548	0.33	+0.6
1,776,417	+		Echvi_1548	0.44	+0.3
1,776,423	-		Echvi_1548	0.46	-1.2
1,776,427	+		Echvi_1548	0.46	+0.5
1,776,428	-		Echvi_1548	0.47	-0.5
1,776,428	-		Echvi_1548	0.47	-0.2
1,776,428	-		Echvi_1548	0.47	+1.5
1,776,428	-		Echvi_1548	0.47	-0.1
1,776,428	-		Echvi_1548	0.47	-0.7
1,776,428	-		Echvi_1548	0.47	-1.6
1,776,428	-		Echvi_1548	0.47	-1.7
1,776,429	+		Echvi_1548	0.47	+0.6
1,776,505	-		Echvi_1548	0.63	-1.2
1,776,505	-		Echvi_1548	0.63	-1.9