Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1517

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,739,411	+				+1.5
1,739,411	+				-0.9
1,739,411	+				-0.2
1,739,412	-				-0.7
1,739,412	-				-1.2
1,739,421	+				-0.4
1,739,421	+				+1.1
1,739,422	-				-0.4
1,739,422	-				-0.8
1,739,422	-				-1.3
1,739,445	-				-1.9
1,739,445	-				+0.6
1,739,482	+				+1.6
1,739,483	-				+1.4
1,739,523	+				-0.2
1,739,524	-				-0.4
1,739,524	-				-1.0
1,739,524	-				-1.7
1,739,686	+				-0.3
1,739,703	-				-0.7
1,739,713	+				+0.2
1,739,714	-				-1.1
1,739,714	-				+1.6
1,739,714	-				-0.9
1,739,748	+				-1.6
1,739,748	+				-0.7
1,739,749	-				+1.3
1,739,752	+				+0.6
1,739,777	-				-0.2
1,739,801	+				-0.3
1,739,802	-				-0.8
1,739,805	+				-2.1
1,739,806	-				+0.1
1,739,860	+				+0.8
1,739,860	+				-1.2
1,739,860	+				+0.8
1,739,861	-				-0.4
1,739,861	-				+2.7
1,739,861	-				+1.3
1,739,861	-				-0.1
1,739,865	-				-1.3
1,739,914	-				-0.3
1,740,019	+				-0.4
1,740,020	-				-1.7
1,740,035	-				-1.1
1,740,074	-				-0.3
1,740,074	-				+0.3
1,740,079	+				-0.1
1,740,079	+				-2.5
1,740,139	+		Echvi_1516	0.32	-1.2
1,740,139	+		Echvi_1516	0.32	-2.1
1,740,237	-		Echvi_1516	0.84	-2.6
1,740,240	+		Echvi_1516	0.86	+0.7
1,740,241	-		Echvi_1516	0.86	-0.4
1,740,241	-		Echvi_1516	0.86	+0.6
1,740,241	-		Echvi_1516	0.86	-1.3
1,740,252	-				-0.8
1,740,252	-				-0.7
1,740,256	+				-1.0
1,740,257	-				-0.6
1,740,261	+				-2.1
1,740,261	+				-1.1
1,740,261	+				-0.4
1,740,261	+				-0.0
1,740,262	-				+0.1
1,740,262	-				-1.0
1,740,262	-				-0.5
1,740,275	+				-1.0
1,740,275	+				-2.0
1,740,275	+				-2.2
1,740,276	-				-1.0
1,740,276	-				-2.3
1,740,281	+				+0.0
1,740,297	+				-0.9
1,740,309	+				-0.3
1,740,342	+				-0.3
1,740,342	+				-1.2
1,740,342	+				-0.2
1,740,342	+				+0.8
1,740,363	+				-0.3
1,740,363	+				+0.9
1,740,380	+				-0.8
1,740,397	+				-0.4
1,740,398	-				+5.1
1,740,410	-				+4.9
1,740,412	+				+0.4
1,740,484	+				+1.5
1,740,515	-				+2.2
1,740,543	+		Echvi_1517	0.11	+0.2
1,740,544	-		Echvi_1517	0.11	-0.4
1,740,633	-		Echvi_1517	0.17	+1.1
1,740,646	+		Echvi_1517	0.18	-0.6
1,740,647	-		Echvi_1517	0.18	-0.3
1,740,651	+		Echvi_1517	0.19	+0.9
1,740,651	+		Echvi_1517	0.19	+0.2
1,740,652	-		Echvi_1517	0.19	+0.6
1,740,657	-		Echvi_1517	0.19	+0.9
1,740,657	-		Echvi_1517	0.19	+0.1
1,740,657	-		Echvi_1517	0.19	+0.1
1,740,657	-		Echvi_1517	0.19	+1.2
1,740,679	-		Echvi_1517	0.21	+0.8
1,740,680	+		Echvi_1517	0.21	+0.4
1,740,680	+		Echvi_1517	0.21	+1.3
1,740,680	+		Echvi_1517	0.21	+0.2
1,740,680	+		Echvi_1517	0.21	+0.5
1,740,681	-		Echvi_1517	0.21	+0.5
1,740,681	-		Echvi_1517	0.21	+0.5
1,740,885	-		Echvi_1517	0.35	+0.7
1,740,894	-		Echvi_1517	0.35	+1.9
1,740,897	+		Echvi_1517	0.36	-1.2
1,740,898	-		Echvi_1517	0.36	-0.4
1,740,933	+		Echvi_1517	0.38	+1.9
1,740,933	+		Echvi_1517	0.38	+1.5
1,741,017	-		Echvi_1517	0.44	+0.2
1,741,100	+		Echvi_1517	0.50	-1.3
1,741,105	+		Echvi_1517	0.50	+0.8
1,741,105	+		Echvi_1517	0.50	+0.8
1,741,106	-		Echvi_1517	0.50	+1.0
1,741,106	-		Echvi_1517	0.50	+1.2
1,741,108	-		Echvi_1517	0.50	+1.1
1,741,108	-		Echvi_1517	0.50	+1.2
1,741,108	-		Echvi_1517	0.50	+0.9
1,741,119	+		Echvi_1517	0.51	+0.5
1,741,119	+		Echvi_1517	0.51	+0.1
1,741,119	+		Echvi_1517	0.51	+1.6
1,741,120	-		Echvi_1517	0.51	+1.3
1,741,120	-		Echvi_1517	0.51	+0.0
1,741,120	-		Echvi_1517	0.51	+2.6
1,741,120	-		Echvi_1517	0.51	+0.7
1,741,120	-		Echvi_1517	0.51	+0.1
1,741,120	-		Echvi_1517	0.51	+0.8
1,741,179	+		Echvi_1517	0.55	+2.1
1,741,181	+		Echvi_1517	0.55	-0.1
1,741,181	+		Echvi_1517	0.55	+1.6
1,741,181	+		Echvi_1517	0.55	+1.9
1,741,182	-		Echvi_1517	0.55	-0.0
1,741,182	-		Echvi_1517	0.55	+1.7
1,741,215	-		Echvi_1517	0.58	+1.1
1,741,370	-		Echvi_1517	0.68	+0.9
1,741,455	+		Echvi_1517	0.74	+1.8
1,741,455	+		Echvi_1517	0.74	+0.9
1,741,455	+		Echvi_1517	0.74	-0.1
1,741,456	-		Echvi_1517	0.74	+0.3
1,741,456	-		Echvi_1517	0.74	+1.2
1,741,527	+		Echvi_1517	0.79	+3.1
1,741,527	+		Echvi_1517	0.79	+0.4
1,741,528	-		Echvi_1517	0.79	+1.0
1,741,528	-		Echvi_1517	0.79	+1.5
1,741,532	+		Echvi_1517	0.79	+2.0
1,741,585	-		Echvi_1517	0.83	+0.4
1,741,637	-		Echvi_1517	0.87	+2.0
1,741,724	+				-0.2
1,741,733	-				+2.2
1,741,743	+				-0.7
1,741,744	-				+1.4
1,741,744	-				+2.3
1,741,745	+				-0.9
1,741,745	+				+1.2
1,741,745	+				+1.1
1,741,745	+				+1.8
1,741,745	+				-0.3
1,741,746	-				+2.0
1,741,746	-				+1.6
1,741,750	-				+3.0
1,741,766	+				+0.6
1,741,774	+				-0.3
1,741,774	+				-0.6
1,741,774	+				-0.7
1,741,775	-				+2.1
1,741,778	-				+1.4
1,741,807	+				-0.5
1,741,827	+				+0.1