Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1372

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,578,880	+				-0.7
1,578,880	+				+1.6
1,578,881	-				+0.2
1,578,881	-				+0.6
1,578,881	-				-0.9
1,578,881	-				+0.6
1,578,895	-				+0.4
1,578,992	-				+0.1
1,579,007	+				+1.4
1,579,026	-				-0.0
1,579,026	-				+0.8
1,579,082	-				-2.3
1,579,091	-				+1.0
1,579,091	-				-0.0
1,579,183	+				-0.1
1,579,185	+				+0.1
1,579,186	-				-0.3
1,579,195	+				-0.4
1,579,205	+				-0.9
1,579,205	+				-1.1
1,579,205	+				-0.8
1,579,210	+				-0.4
1,579,217	+				+0.0
1,579,229	+				-0.9
1,579,230	-				+0.8
1,579,247	-				+0.3
1,579,250	+				+1.5
1,579,253	+				-0.7
1,579,325	+		Echvi_1371	0.21	-0.1
1,579,326	-		Echvi_1371	0.21	+0.0
1,579,331	+		Echvi_1371	0.22	-0.2
1,579,331	+		Echvi_1371	0.22	+0.4
1,579,380	+		Echvi_1371	0.30	+0.2
1,579,381	-		Echvi_1371	0.30	-0.3
1,579,381	-		Echvi_1371	0.30	-0.8
1,579,383	+		Echvi_1371	0.30	+0.7
1,579,384	-		Echvi_1371	0.30	+1.0
1,579,399	+		Echvi_1371	0.33	-1.0
1,579,447	+		Echvi_1371	0.40	+1.0
1,579,448	-		Echvi_1371	0.40	+0.6
1,579,502	+		Echvi_1371	0.49	-1.3
1,579,502	+		Echvi_1371	0.49	+1.0
1,579,502	+		Echvi_1371	0.49	+0.1
1,579,502	+		Echvi_1371	0.49	-1.7
1,579,502	+		Echvi_1371	0.49	-0.2
1,579,503	-		Echvi_1371	0.49	+1.1
1,579,503	-		Echvi_1371	0.49	+0.8
1,579,503	-		Echvi_1371	0.49	+0.2
1,579,503	-		Echvi_1371	0.49	-0.3
1,579,508	-		Echvi_1371	0.50	+0.8
1,579,511	+		Echvi_1371	0.50	-2.3
1,579,512	-				+0.2
1,579,512	-		Echvi_1371	0.50	+2.5
1,579,539	+		Echvi_1371	0.55	-0.2
1,579,588	+		Echvi_1371	0.62	-0.4
1,579,588	+		Echvi_1371	0.62	-1.1
1,579,589	-		Echvi_1371	0.63	+0.5
1,579,611	-		Echvi_1371	0.66	-2.5
1,579,720	+		Echvi_1371	0.83	+0.8
1,579,720	+		Echvi_1371	0.83	-0.8
1,579,721	-		Echvi_1371	0.83	+0.0
1,579,726	+		Echvi_1371	0.84	+1.3
1,579,727	-		Echvi_1371	0.84	+0.8
1,579,727	-		Echvi_1371	0.84	-0.7
1,579,766	+				+1.2
1,579,766	+				+1.6
1,579,766	+				-0.2
1,579,766	+				+1.9
1,579,766	+				+1.0
1,579,767	-				+1.8
1,579,767	-				-0.3
1,579,767	-				-0.3
1,579,827	-				-1.0
1,579,854	+				-0.1
1,579,855	-				-1.7
1,579,855	-				-0.3
1,579,875	-				+0.4
1,579,875	-				-1.2
1,579,879	-				-2.6
1,579,879	-				+1.2
1,579,879	-				-2.5
1,579,880	+				+0.1
1,579,880	+				-0.2
1,579,880	+				+0.6
1,579,881	-				+0.6
1,579,881	-				-1.5
1,579,886	-				+0.3
1,579,913	-		Echvi_1372	0.12	+0.9
1,579,931	+		Echvi_1372	0.15	-0.4
1,579,940	-		Echvi_1372	0.17	-0.8
1,579,972	+		Echvi_1372	0.22	-0.6
1,579,979	-		Echvi_1372	0.23	-0.0
1,579,979	-		Echvi_1372	0.23	-0.1
1,579,989	+		Echvi_1372	0.24	+0.4
1,579,995	-		Echvi_1372	0.25	-1.6
1,580,018	-		Echvi_1372	0.29	-0.4
1,580,018	-		Echvi_1372	0.29	-1.5
1,580,021	-		Echvi_1372	0.29	-1.5
1,580,037	-		Echvi_1372	0.32	-0.7
1,580,043	+		Echvi_1372	0.33	-0.6
1,580,069	+		Echvi_1372	0.37	-0.6
1,580,080	-		Echvi_1372	0.39	-0.2
1,580,080	-		Echvi_1372	0.39	+0.6
1,580,092	-		Echvi_1372	0.40	-0.6
1,580,110	+		Echvi_1372	0.43	-2.0
1,580,110	+		Echvi_1372	0.43	+1.7
1,580,111	-		Echvi_1372	0.43	-0.3
1,580,152	-		Echvi_1372	0.50	+0.0
1,580,152	-		Echvi_1372	0.50	+1.2
1,580,156	-		Echvi_1372	0.50	-0.7
1,580,156	-		Echvi_1372	0.50	-0.9
1,580,362	+		Echvi_1372	0.83	+1.0
1,580,364	+		Echvi_1372	0.83	-1.3
1,580,364	+		Echvi_1372	0.83	+0.6
1,580,365	-		Echvi_1372	0.83	-1.5
1,580,365	-		Echvi_1372	0.83	+0.7
1,580,365	-		Echvi_1372	0.83	-1.0
1,580,365	-		Echvi_1372	0.83	+0.1
1,580,370	+		Echvi_1372	0.84	+0.6
1,580,370	+		Echvi_1372	0.84	-0.8
1,580,408	-				-0.4
1,580,408	-				-0.8
1,580,410	+				+0.3
1,580,478	+				-0.8
1,580,478	+				-0.8
1,580,478	+				-0.6
1,580,479	-				-0.5
1,580,496	+				+0.4
1,580,497	-				-1.3
1,580,497	-				+1.2
1,580,507	-				-1.0
1,580,571	+		Echvi_1373	0.13	-1.1
1,580,578	+		Echvi_1373	0.14	-0.3
1,580,583	+		Echvi_1373	0.15	-0.7
1,580,583	+		Echvi_1373	0.15	-0.4
1,580,583	+		Echvi_1373	0.15	-0.8
1,580,584	-		Echvi_1373	0.15	-1.1
1,580,584	-		Echvi_1373	0.15	+0.6
1,580,584	-		Echvi_1373	0.15	+0.4
1,580,584	-		Echvi_1373	0.15	+0.2
1,580,584	-		Echvi_1373	0.15	-1.2
1,580,584	-		Echvi_1373	0.15	-0.6
1,580,585	+		Echvi_1373	0.15	-0.6
1,580,586	-		Echvi_1373	0.16	-0.4
1,580,605	+		Echvi_1373	0.19	-0.3
1,580,606	-		Echvi_1373	0.19	-0.4
1,580,607	+		Echvi_1373	0.19	-1.0
1,580,628	-		Echvi_1373	0.22	+0.2
1,580,638	+		Echvi_1373	0.24	-1.0
1,580,639	-		Echvi_1373	0.24	+0.2
1,580,666	+		Echvi_1373	0.28	+0.4
1,580,679	+		Echvi_1373	0.30	-0.8
1,580,680	-		Echvi_1373	0.30	-0.1
1,580,681	+		Echvi_1373	0.31	+0.2
1,580,681	+		Echvi_1373	0.31	-0.4
1,580,681	+		Echvi_1373	0.31	+0.1
1,580,682	-		Echvi_1373	0.31	+0.0
1,580,731	+		Echvi_1373	0.38	-2.1
1,580,732	-		Echvi_1373	0.39	-0.7
1,580,752	-		Echvi_1373	0.42	-0.3
1,580,762	+		Echvi_1373	0.43	-0.5
1,580,763	-		Echvi_1373	0.43	+1.0
1,580,763	-		Echvi_1373	0.43	-0.1
1,580,973	-		Echvi_1373	0.76	-0.4
1,580,996	+		Echvi_1373	0.80	-2.1
1,580,997	-		Echvi_1373	0.80	+0.2
1,581,016	+		Echvi_1373	0.83	+2.2
1,581,016	+		Echvi_1373	0.83	+0.3
1,581,016	+		Echvi_1373	0.83	-0.4
1,581,016	+		Echvi_1373	0.83	-0.9
1,581,016	+		Echvi_1373	0.83	-0.2
1,581,016	+		Echvi_1373	0.83	-0.1
1,581,016	+		Echvi_1373	0.83	+0.3
1,581,022	+		Echvi_1373	0.84	-0.1
1,581,022	+		Echvi_1373	0.84	-0.1
1,581,060	-				+0.2
1,581,060	-				+0.9
1,581,225	+				-1.6
1,581,225	+				-0.4
1,581,226	-				-0.2
1,581,272	+				+0.1
1,581,276	+				-1.7
1,581,276	+				+0.9
1,581,277	-				-1.0
1,581,277	-				-1.1
1,581,277	-				-0.5
1,581,338	+				-0.3
1,581,360	+				-1.4
1,581,361	-				+0.3
1,581,397	+				+0.0