Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1257

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,442,377	+		Echvi_1256	0.45	-0.2
1,442,395	+		Echvi_1256	0.47	-2.1
1,442,476	+		Echvi_1256	0.56	+0.6
1,442,476	+		Echvi_1256	0.56	+1.2
1,442,476	+		Echvi_1256	0.56	-0.4
1,442,476	+		Echvi_1256	0.56	-0.5
1,442,478	+		Echvi_1256	0.56	-3.0
1,442,478	+		Echvi_1256	0.56	-2.5
1,442,479	-		Echvi_1256	0.56	+0.3
1,442,556	+		Echvi_1256	0.65	-1.1
1,442,556	+		Echvi_1256	0.65	-0.8
1,442,557	-		Echvi_1256	0.65	-0.2
1,442,580	-		Echvi_1256	0.67	+0.4
1,442,589	+		Echvi_1256	0.68	-0.2
1,442,604	-		Echvi_1256	0.70	-2.0
1,442,604	-		Echvi_1256	0.70	-1.0
1,442,669	+		Echvi_1256	0.77	-0.2
1,442,669	+		Echvi_1256	0.77	-0.2
1,442,669	+		Echvi_1256	0.77	-1.7
1,442,669	+		Echvi_1256	0.77	-2.9
1,442,670	-		Echvi_1256	0.77	-1.5
1,442,670	-		Echvi_1256	0.77	-2.4
1,442,670	-		Echvi_1256	0.77	-2.1
1,442,673	-		Echvi_1256	0.78	-2.3
1,442,673	-		Echvi_1256	0.78	+0.4
1,442,704	-		Echvi_1256	0.81	-0.8
1,442,704	-		Echvi_1256	0.81	-1.3
1,442,748	-		Echvi_1256	0.86	-1.8
1,442,779	+		Echvi_1256	0.89	-2.2
1,442,779	+		Echvi_1256	0.89	-2.2
1,442,779	+		Echvi_1256	0.89	-2.3
1,442,780	-		Echvi_1256	0.90	-1.9
1,442,780	-		Echvi_1256	0.90	-0.3
1,442,790	-				-1.8
1,442,836	+				-0.8
1,442,836	+				-0.8
1,442,837	-				-0.2
1,443,000	+				+0.3
1,443,004	+				+0.9
1,443,004	+				-1.3
1,443,007	+				-1.0
1,443,039	-				-0.7
1,443,152	-				-1.0
1,443,197	-				+0.8
1,443,200	+				+0.8
1,443,246	+				+1.3
1,443,250	+				+0.7
1,443,251	-				+0.9
1,443,254	-				-0.5
1,443,257	+				+2.7
1,443,257	+				-0.5
1,443,258	-				-2.2
1,443,258	-				+0.3
1,443,258	-				-0.8
1,443,258	-				-0.1
1,443,258	-				+0.7
1,443,260	+				-1.2
1,443,260	+				+0.1
1,443,260	+				+1.2
1,443,261	-				+0.6
1,443,261	-				+1.0
1,443,299	+				+0.9
1,443,300	-				-0.2
1,443,303	+				-0.2
1,443,340	-				+1.0
1,443,400	+				-1.9
1,443,407	+				+0.2
1,443,408	-				+1.1
1,443,408	-				+1.3
1,443,427	+		Echvi_1257	0.12	+0.6
1,443,427	+		Echvi_1257	0.12	+1.8
1,443,427	+		Echvi_1257	0.12	-0.8
1,443,428	-		Echvi_1257	0.12	+1.2
1,443,430	+		Echvi_1257	0.13	+1.3
1,443,431	-		Echvi_1257	0.13	+0.3
1,443,431	-		Echvi_1257	0.13	+0.4
1,443,440	-		Echvi_1257	0.14	+0.2
1,443,440	-		Echvi_1257	0.14	-0.1
1,443,445	+		Echvi_1257	0.15	+0.4
1,443,445	+		Echvi_1257	0.15	+1.4
1,443,486	-		Echvi_1257	0.21	+0.3
1,443,494	-		Echvi_1257	0.23	+2.7
1,443,524	+		Echvi_1257	0.27	+1.1
1,443,524	+		Echvi_1257	0.27	+0.9
1,443,524	+		Echvi_1257	0.27	+0.4
1,443,525	-		Echvi_1257	0.27	+1.9
1,443,525	-		Echvi_1257	0.27	+0.3
1,443,525	-		Echvi_1257	0.27	+0.6
1,443,526	+		Echvi_1257	0.27	+0.6
1,443,558	-		Echvi_1257	0.32	+0.4
1,443,564	+		Echvi_1257	0.33	+0.2
1,443,564	+		Echvi_1257	0.33	+1.7
1,443,565	-		Echvi_1257	0.33	+0.3
1,443,565	-		Echvi_1257	0.33	+0.7
1,443,565	-		Echvi_1257	0.33	+1.4
1,443,639	-		Echvi_1257	0.45	+0.3
1,443,681	-		Echvi_1257	0.51	-1.4
1,443,690	+		Echvi_1257	0.53	+1.2
1,443,757	+		Echvi_1257	0.63	-0.1
1,443,794	+		Echvi_1257	0.69	+0.3
1,443,795	-		Echvi_1257	0.69	+1.0
1,443,795	-		Echvi_1257	0.69	+0.4
1,443,817	+		Echvi_1257	0.72	+1.2
1,443,817	+		Echvi_1257	0.72	+0.6
1,443,817	+		Echvi_1257	0.72	+0.8
1,443,817	+		Echvi_1257	0.72	-0.3
1,443,817	+		Echvi_1257	0.72	-0.1
1,443,818	-		Echvi_1257	0.72	-0.8
1,443,819	+		Echvi_1257	0.73	+0.8
1,443,823	+		Echvi_1257	0.73	-0.4
1,443,823	+		Echvi_1257	0.73	+0.9
1,443,824	-		Echvi_1257	0.73	+1.3
1,443,824	-		Echvi_1257	0.73	+0.3
1,443,832	+		Echvi_1257	0.75	+0.9
1,443,859	-		Echvi_1257	0.79	+0.4
1,443,882	+		Echvi_1257	0.82	+0.2
1,443,905	-		Echvi_1257	0.86	+1.1
1,443,928	+		Echvi_1257	0.89	+0.7
1,443,928	+		Echvi_1257	0.89	-0.7
1,443,928	+		Echvi_1257	0.89	+1.2
1,443,928	+		Echvi_1257	0.89	+1.2
1,443,929	-		Echvi_1257	0.89	+0.2
1,443,929	-		Echvi_1257	0.89	-3.0
1,443,929	-		Echvi_1257	0.89	+1.6
1,443,929	-		Echvi_1257	0.89	+0.2
1,443,929	-		Echvi_1257	0.89	+1.0
1,443,974	+				-0.3
1,443,975	-				-0.1
1,443,987	-				+0.7
1,444,017	+				-1.6
1,444,018	-				+1.1
1,444,018	-				+0.0
1,444,050	+				+0.1
1,444,050	+				-0.2
1,444,050	+				-0.8
1,444,051	-				+0.9
1,444,086	+				-1.8
1,444,087	-				-1.5
1,444,107	-				-1.6
1,444,115	+				-0.5
1,444,129	+		Echvi_1258	0.12	-1.2
1,444,129	+		Echvi_1258	0.12	-0.7
1,444,130	-		Echvi_1258	0.12	-1.3
1,444,170	+		Echvi_1258	0.21	+0.8
1,444,171	-		Echvi_1258	0.21	+0.9
1,444,253	+		Echvi_1258	0.38	-1.1
1,444,253	+		Echvi_1258	0.38	+0.2
1,444,295	-		Echvi_1258	0.46	-1.4
1,444,305	+		Echvi_1258	0.48	+0.7
1,444,336	+		Echvi_1258	0.55	-0.1
1,444,364	+		Echvi_1258	0.60	-0.7
1,444,364	+		Echvi_1258	0.60	+1.3
1,444,365	-		Echvi_1258	0.61	+0.2
1,444,410	+		Echvi_1258	0.70	-0.5
1,444,410	+		Echvi_1258	0.70	-1.9
1,444,410	+		Echvi_1258	0.70	+0.9
1,444,411	-		Echvi_1258	0.70	-0.3
1,444,421	+		Echvi_1258	0.72	-0.2
1,444,421	+		Echvi_1258	0.72	+0.8
1,444,421	+		Echvi_1258	0.72	+0.8
1,444,422	-		Echvi_1258	0.72	+0.2
1,444,453	+		Echvi_1258	0.79	-0.7
1,444,516	+				-1.2
1,444,517	-				+0.0
1,444,561	+				-1.0
1,444,562	-				-0.5
1,444,562	-				-0.1
1,444,562	-				+0.2
1,444,580	+				-1.3
1,444,581	-				+0.9
1,444,616	+				-1.4
1,444,748	-		Echvi_1259	0.38	-1.0
1,444,924	+		Echvi_1259	0.78	-0.3
1,444,927	+		Echvi_1259	0.78	-0.8
1,444,927	+		Echvi_1259	0.78	-0.8
1,444,928	-		Echvi_1259	0.79	-1.0