Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1099

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,258,472	+		Echvi_1098	0.41	+0.9
1,258,473	-		Echvi_1098	0.41	-1.2
1,258,479	+		Echvi_1098	0.42	+1.6
1,258,479	+		Echvi_1098	0.42	-0.4
1,258,480	-		Echvi_1098	0.42	+0.6
1,258,541	+		Echvi_1098	0.46	-0.1
1,258,549	-		Echvi_1098	0.47	-0.0
1,258,549	-		Echvi_1098	0.47	+0.5
1,258,554	+		Echvi_1098	0.47	+0.8
1,258,554	+		Echvi_1098	0.47	+0.1
1,258,555	-		Echvi_1098	0.47	-1.2
1,258,555	-		Echvi_1098	0.47	+0.2
1,258,555	-		Echvi_1098	0.47	-0.6
1,258,555	-		Echvi_1098	0.47	+0.8
1,258,607	+		Echvi_1098	0.51	+1.0
1,258,653	+		Echvi_1098	0.54	+1.4
1,258,689	+		Echvi_1098	0.57	+0.2
1,258,702	-		Echvi_1098	0.58	+0.8
1,258,702	-		Echvi_1098	0.58	+0.7
1,258,702	-		Echvi_1098	0.58	-0.7
1,258,760	-		Echvi_1098	0.62	-0.5
1,258,760	-		Echvi_1098	0.62	+0.2
1,258,762	-		Echvi_1098	0.62	-0.8
1,258,828	+		Echvi_1098	0.67	-2.1
1,258,873	+		Echvi_1098	0.70	-0.6
1,258,874	-		Echvi_1098	0.70	-1.2
1,259,144	+		Echvi_1098	0.89	-0.3
1,259,249	+				+0.6
1,259,250	-				-0.2
1,259,250	-				+0.5
1,259,250	-				-1.1
1,259,283	+				-0.3
1,259,283	+				-1.1
1,259,283	+				-0.0
1,259,284	-				-2.2
1,259,299	+				-2.1
1,259,300	-				-0.9
1,259,307	+				+1.0
1,259,317	+				-0.3
1,259,318	-				-0.7
1,259,318	-				-1.1
1,259,318	-				-0.2
1,259,335	-				+0.2
1,259,339	+				-1.9
1,259,479	+		Echvi_1099	0.13	+0.1
1,259,479	+		Echvi_1099	0.13	+1.5
1,259,479	+		Echvi_1099	0.13	-0.0
1,259,480	-		Echvi_1099	0.13	-0.8
1,259,480	-		Echvi_1099	0.13	-0.1
1,259,480	-		Echvi_1099	0.13	-0.8
1,259,481	+		Echvi_1099	0.13	-1.0
1,259,481	+		Echvi_1099	0.13	-0.7
1,259,481	+		Echvi_1099	0.13	-0.5
1,259,481	+		Echvi_1099	0.13	-0.2
1,259,481	+		Echvi_1099	0.13	-0.9
1,259,481	+		Echvi_1099	0.13	+1.1
1,259,481	+		Echvi_1099	0.13	-0.8
1,259,482	-		Echvi_1099	0.13	+0.2
1,259,482	-		Echvi_1099	0.13	-1.7
1,259,482	-		Echvi_1099	0.13	-0.3
1,259,482	-		Echvi_1099	0.13	-0.4
1,259,490	+		Echvi_1099	0.14	+1.8
1,259,536	+		Echvi_1099	0.17	-0.4
1,259,615	-		Echvi_1099	0.24	-1.2
1,259,631	+		Echvi_1099	0.25	-1.0
1,259,631	+		Echvi_1099	0.25	+0.6
1,259,631	+		Echvi_1099	0.25	+0.9
1,259,631	+		Echvi_1099	0.25	+0.3
1,259,631	+		Echvi_1099	0.25	-1.3
1,259,631	+		Echvi_1099	0.25	-1.3
1,259,631	+		Echvi_1099	0.25	+0.6
1,259,632	-		Echvi_1099	0.25	-1.3
1,259,632	-		Echvi_1099	0.25	-0.6
1,259,632	-		Echvi_1099	0.25	-1.1
1,259,653	-		Echvi_1099	0.26	-0.7
1,259,657	-		Echvi_1099	0.27	-1.4
1,259,662	+		Echvi_1099	0.27	+0.0
1,259,663	-		Echvi_1099	0.27	-0.1
1,259,663	-		Echvi_1099	0.27	-1.1
1,259,732	+		Echvi_1099	0.33	+0.1
1,259,732	+		Echvi_1099	0.33	+1.6
1,259,755	+		Echvi_1099	0.35	-0.8
1,259,805	-		Echvi_1099	0.38	-0.7
1,259,805	-		Echvi_1099	0.38	-0.7
1,259,857	+		Echvi_1099	0.43	-0.3
1,259,857	+		Echvi_1099	0.43	+0.5
1,259,858	-		Echvi_1099	0.43	+0.9
1,259,858	-		Echvi_1099	0.43	-0.5
1,259,861	-		Echvi_1099	0.43	+0.1
1,259,874	+		Echvi_1099	0.44	+0.9
1,259,875	-		Echvi_1099	0.44	-1.5
1,259,875	-		Echvi_1099	0.44	+2.2
1,259,895	+		Echvi_1099	0.46	+0.6
1,259,895	+		Echvi_1099	0.46	+1.2
1,259,895	+		Echvi_1099	0.46	+1.5
1,259,937	-		Echvi_1099	0.49	-1.8
1,260,016	+		Echvi_1099	0.55	+0.4
1,260,017	-		Echvi_1099	0.55	-2.0
1,260,029	+		Echvi_1099	0.56	-0.8
1,260,030	-		Echvi_1099	0.56	+2.2
1,260,030	-		Echvi_1099	0.56	-1.0
1,260,031	+		Echvi_1099	0.56	+1.8
1,260,032	-		Echvi_1099	0.56	+1.2
1,260,042	+		Echvi_1099	0.57	-1.6
1,260,043	-		Echvi_1099	0.57	+0.2
1,260,048	-		Echvi_1099	0.58	+1.5
1,260,048	-		Echvi_1099	0.58	+0.4
1,260,050	-		Echvi_1099	0.58	-0.9
1,260,073	-		Echvi_1099	0.60	-0.5
1,260,073	-		Echvi_1099	0.60	-0.4
1,260,073	-		Echvi_1099	0.60	-0.1
1,260,073	-		Echvi_1099	0.60	-1.3
1,260,107	+		Echvi_1099	0.62	-1.2
1,260,109	+		Echvi_1099	0.62	+0.2
1,260,121	-		Echvi_1099	0.63	-1.7
1,260,121	-		Echvi_1099	0.63	+1.5
1,260,224	+		Echvi_1099	0.71	+1.0
1,260,229	+		Echvi_1099	0.72	-0.1
1,260,229	+		Echvi_1099	0.72	-0.0
1,260,229	+		Echvi_1099	0.72	-0.1
1,260,229	+		Echvi_1099	0.72	-0.2
1,260,353	+		Echvi_1099	0.82	-0.9
1,260,354	-		Echvi_1099	0.82	-0.2
1,260,377	+		Echvi_1099	0.83	-1.4
1,260,378	-		Echvi_1099	0.83	+0.3
1,260,378	-		Echvi_1099	0.83	-1.1
1,260,381	+		Echvi_1099	0.84	+0.0
1,260,398	+		Echvi_1099	0.85	-0.1
1,260,399	-		Echvi_1099	0.85	-0.4
1,260,399	-		Echvi_1099	0.85	-2.2
1,260,399	-		Echvi_1099	0.85	-0.2
1,260,400	+		Echvi_1099	0.85	+0.1
1,260,401	-		Echvi_1099	0.85	-2.2
1,260,401	-		Echvi_1099	0.85	-0.5
1,260,409	+		Echvi_1099	0.86	-1.8
1,260,409	+		Echvi_1099	0.86	-0.4
1,260,410	-		Echvi_1099	0.86	+0.3
1,260,502	-				-1.6
1,260,515	+				-0.1
1,260,533	+				-0.8
1,260,555	+				-0.5
1,260,575	-				+0.3
1,260,625	-				-1.6
1,260,648	+				-0.7
1,260,657	+				-0.9
1,260,677	+				-2.4
1,260,677	+				+0.1
1,260,678	-				-0.5
1,260,678	-				-1.1
1,260,701	+				-0.5
1,260,742	+				-1.3
1,260,743	-				+0.3
1,260,754	-				+1.2
1,260,754	-				+0.5
1,260,773	+				-0.5
1,260,788	+				-1.0
1,260,932	-		Echvi_1100	0.22	-0.8
1,260,952	+		Echvi_1100	0.25	-1.5
1,260,952	+		Echvi_1100	0.25	-1.0
1,260,953	-		Echvi_1100	0.25	+0.1
1,260,953	-		Echvi_1100	0.25	-1.1
1,260,953	-		Echvi_1100	0.25	-1.0
1,260,990	+		Echvi_1100	0.31	+1.0
1,260,990	+		Echvi_1100	0.31	+1.6
1,260,991	-		Echvi_1100	0.31	-0.6
1,260,991	-		Echvi_1100	0.31	-0.8
1,260,991	-		Echvi_1100	0.31	+1.2
1,260,993	+		Echvi_1100	0.31	+0.7
1,260,993	+		Echvi_1100	0.31	-0.5
1,260,993	+		Echvi_1100	0.31	-0.9
1,261,011	+		Echvi_1100	0.33	-1.9
1,261,065	+		Echvi_1100	0.41	-0.8
1,261,083	-		Echvi_1100	0.44	+1.2
1,261,105	+		Echvi_1100	0.47	+1.0
1,261,105	+		Echvi_1100	0.47	-0.8
1,261,106	-		Echvi_1100	0.47	-2.1
1,261,106	-		Echvi_1100	0.47	+0.4
1,261,123	+		Echvi_1100	0.49	+0.0
1,261,123	+		Echvi_1100	0.49	-0.4
1,261,124	-		Echvi_1100	0.49	-0.7
1,261,196	+		Echvi_1100	0.59	-1.3
1,261,197	-		Echvi_1100	0.60	+0.1
1,261,197	-		Echvi_1100	0.60	-0.5
1,261,297	+		Echvi_1100	0.74	-1.1
1,261,297	+		Echvi_1100	0.74	-0.0
1,261,297	+		Echvi_1100	0.74	-2.2
1,261,297	+		Echvi_1100	0.74	-1.6
1,261,314	+		Echvi_1100	0.76	-0.1
1,261,319	+		Echvi_1100	0.77	-0.4
1,261,351	-		Echvi_1100	0.81	+1.5
1,261,386	+		Echvi_1100	0.86	-1.9
1,261,386	+		Echvi_1100	0.86	-1.3
1,261,386	+		Echvi_1100	0.86	-0.1
1,261,386	+		Echvi_1100	0.86	-1.4
1,261,386	+		Echvi_1100	0.86	-0.9
1,261,386	+		Echvi_1100	0.86	-0.1
1,261,386	+		Echvi_1100	0.86	+0.4
1,261,387	-		Echvi_1100	0.86	+1.3
1,261,387	-		Echvi_1100	0.86	-0.9
1,261,387	-		Echvi_1100	0.86	+1.2
1,261,387	-		Echvi_1100	0.86	-0.9
1,261,400	-		Echvi_1100	0.88	+0.8
1,261,452	+				-1.5
1,261,459	-				-0.2
1,261,459	-				-0.6
1,261,461	-				+0.1