Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0988

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
1,145,505	+		Echvi_0987	0.64	-1.7
1,145,506	-		Echvi_0987	0.64	-0.4
1,145,520	-		Echvi_0987	0.64	+0.2
1,145,520	-		Echvi_0987	0.64	-0.1
1,145,521	+		Echvi_0987	0.64	-2.2
1,145,603	+		Echvi_0987	0.69	-1.9
1,145,604	-		Echvi_0987	0.69	-3.5
1,145,608	+		Echvi_0987	0.69	-0.9
1,145,608	+		Echvi_0987	0.69	-1.5
1,145,609	-		Echvi_0987	0.69	+3.2
1,145,669	+		Echvi_0987	0.72	-2.6
1,145,773	+		Echvi_0987	0.78	-0.9
1,145,821	+		Echvi_0987	0.80	-0.5
1,145,822	-		Echvi_0987	0.80	+1.2
1,145,874	-		Echvi_0987	0.83	+0.8
1,145,883	+		Echvi_0987	0.84	-0.9
1,145,923	+		Echvi_0987	0.86	-0.7
1,145,923	+		Echvi_0987	0.86	-1.9
1,145,923	+		Echvi_0987	0.86	+0.7
1,145,923	+		Echvi_0987	0.86	-2.1
1,145,924	-		Echvi_0987	0.86	-1.1
1,145,924	-		Echvi_0987	0.86	+1.0
1,145,948	+		Echvi_0987	0.87	+0.1
1,145,948	+		Echvi_0987	0.87	-1.7
1,145,949	-		Echvi_0987	0.87	+0.7
1,146,034	+				-2.8
1,146,034	+				-2.0
1,146,035	-				+0.7
1,146,048	-				+0.8
1,146,072	-				-2.0
1,146,091	-				-1.2
1,146,102	+				-1.6
1,146,152	+				-1.6
1,146,191	+				-0.6
1,146,191	+				-1.2
1,146,191	+				-1.3
1,146,195	+				-0.9
1,146,195	+				-1.1
1,146,195	+				-0.4
1,146,195	+				-1.2
1,146,195	+				-1.0
1,146,196	-				-1.3
1,146,196	-				+3.2
1,146,196	-				-1.8
1,146,196	-				-0.6
1,146,239	+				-1.0
1,146,344	-				-0.8
1,146,364	+				+0.1
1,146,391	+				-0.0
1,146,475	+				-0.5
1,146,476	-				-0.7
1,146,480	+				-0.3
1,146,481	-				+0.3
1,146,504	-				-1.1
1,146,636	+		Echvi_0988	0.18	+1.7
1,146,684	-		Echvi_0988	0.24	+0.2
1,146,716	+		Echvi_0988	0.28	-0.7
1,146,764	+		Echvi_0988	0.34	+0.8
1,146,871	+		Echvi_0988	0.47	-0.0
1,146,871	+		Echvi_0988	0.47	-1.0
1,146,889	+		Echvi_0988	0.49	+1.5
1,146,920	+		Echvi_0988	0.53	+1.0
1,146,921	-		Echvi_0988	0.53	-1.5
1,146,921	-		Echvi_0988	0.53	-0.9
1,146,921	-		Echvi_0988	0.53	+0.6
1,146,922	+		Echvi_0988	0.53	-0.2
1,146,923	-		Echvi_0988	0.54	+0.2
1,146,923	-		Echvi_0988	0.54	+0.0
1,146,923	-		Echvi_0988	0.54	+2.7
1,146,951	+		Echvi_0988	0.57	-0.8
1,146,951	+		Echvi_0988	0.57	+0.7
1,146,951	+		Echvi_0988	0.57	-1.1
1,146,963	+		Echvi_0988	0.59	-0.8
1,146,963	+		Echvi_0988	0.59	-0.8
1,146,963	+		Echvi_0988	0.59	+0.4
1,146,964	-		Echvi_0988	0.59	-0.8
1,146,964	-		Echvi_0988	0.59	-1.0
1,146,965	+		Echvi_0988	0.59	+1.2
1,146,965	+		Echvi_0988	0.59	-1.0
1,146,965	+		Echvi_0988	0.59	+0.2
1,146,965	+		Echvi_0988	0.59	+0.6
1,146,966	-		Echvi_0988	0.59	-1.4
1,147,081	+		Echvi_0988	0.73	+0.2
1,147,081	+		Echvi_0988	0.73	-0.2
1,147,082	-		Echvi_0988	0.73	-0.9
1,147,088	-		Echvi_0988	0.74	-0.6
1,147,100	+		Echvi_0988	0.76	-0.3
1,147,119	+		Echvi_0988	0.78	-0.8
1,147,120	-		Echvi_0988	0.78	-0.2
1,147,120	-		Echvi_0988	0.78	-0.6
1,147,120	-		Echvi_0988	0.78	+2.2
1,147,120	-		Echvi_0988	0.78	-1.3
1,147,156	+		Echvi_0988	0.83	-1.5
1,147,209	+		Echvi_0988	0.89	+1.2
1,147,209	+		Echvi_0988	0.89	+2.7
1,147,209	+		Echvi_0988	0.89	-0.3
1,147,210	-		Echvi_0988	0.89	+1.5
1,147,210	-		Echvi_0988	0.89	+0.7
1,147,224	+				-0.8
1,147,224	+				+0.2
1,147,225	-				+0.5
1,147,225	-				-1.5
1,147,225	-				+0.4
1,147,225	-				-0.7
1,147,225	-				-0.7
1,147,225	-				-0.2
1,147,227	+				+0.4
1,147,281	+				-0.2
1,147,281	+				-1.0
1,147,282	-				+0.9
1,147,282	-				-0.9
1,147,411	+				+0.3
1,147,411	+				-0.1
1,147,411	+				-0.8
1,147,411	+				-0.2
1,147,411	+				+0.2
1,147,411	+				+0.1
1,147,411	+				+0.4
1,147,412	-				+0.1
1,147,412	-				-0.4
1,147,412	-				-0.6
1,147,412	-				-0.9
1,147,412	-				+0.2
1,147,412	-				-0.6
1,147,412	-				+0.2
1,147,413	+				-1.2
1,147,414	-				-0.8
1,147,414	-				-0.3
1,147,434	+				-0.4
1,147,434	+				-0.0
1,147,435	-				+0.6
1,147,438	+				+1.2
1,147,439	-				+0.1
1,147,444	+				+0.1
1,147,444	+				-0.3
1,147,444	+				+0.2
1,147,444	+				-0.4
1,147,444	+				+1.0
1,147,445	-				-0.1
1,147,453	+				+0.4
1,147,453	+				-1.0
1,147,454	-				-0.8
1,147,486	+				-0.8
1,147,487	-				-0.8
1,147,503	-				+0.4
1,147,522	+				-0.4
1,147,524	+				-1.0
1,147,539	-				+0.9
1,147,539	-				-2.1
1,147,545	+				+0.8
1,147,545	+				+1.2
1,147,545	+				-1.0
1,147,545	+				+0.9
1,147,546	-				+0.7
1,147,546	-				-0.2
1,147,546	-				-0.6
1,147,546	-				+0.3
1,147,546	-				-0.2
1,147,684	+				-0.6
1,147,684	+				-0.9
1,147,712	+				-0.7
1,147,716	+				-0.5
1,147,716	+				-0.3
1,147,739	+				-0.5
1,147,739	+				-1.0
1,147,740	-				+1.1
1,147,740	-				-0.6
1,147,782	+				-0.3
1,147,782	+				-0.8
1,147,783	-				-0.1
1,147,784	+				-0.7
1,147,784	+				-1.1
1,147,784	+				+1.7
1,147,784	+				+0.0
1,147,784	+				+1.2
1,147,784	+				-0.6
1,147,785	-				-0.8
1,147,785	-				-0.6
1,147,785	-				+0.8
1,147,822	-				-0.8
1,147,865	+				+0.9
1,147,866	-				-1.1
1,147,922	+				-0.3
1,147,953	+				+0.4
1,147,953	+				+0.1
1,147,956	+				+2.5
1,147,999	+		Echvi_0989	0.14	+1.8
1,148,005	-		Echvi_0989	0.16	-0.7
1,148,032	+		Echvi_0989	0.24	-0.3
1,148,049	+		Echvi_0989	0.29	-0.6
1,148,050	-		Echvi_0989	0.29	+0.3
1,148,052	+		Echvi_0989	0.29	-0.1
1,148,053	-		Echvi_0989	0.30	+0.6
1,148,053	-		Echvi_0989	0.30	-0.5
1,148,079	+		Echvi_0989	0.37	+1.2
1,148,080	+		Echvi_0989	0.38	+0.6
1,148,080	+		Echvi_0989	0.38	-1.8
1,148,081	-		Echvi_0989	0.38	+1.7
1,148,081	-		Echvi_0989	0.38	+0.4
1,148,081	-		Echvi_0989	0.38	-0.7
1,148,081	-		Echvi_0989	0.38	-0.2
1,148,082	+		Echvi_0989	0.38	-1.2
1,148,213	-		Echvi_0989	0.77	+0.4
1,148,252	-		Echvi_0989	0.88	-0.5
1,148,267	+				+0.3
1,148,268	-				+2.5