Experiment: m.b. Carbenicillin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0342 and Echvi_0343 are separated by 1 nucleotides Echvi_0343 and Echvi_0344 are separated by 65 nucleotides Echvi_0344 and Echvi_0345 are separated by 122 nucleotides Echvi_0345 and Echvi_0346 are separated by 81 nucleotides
Echvi_0342: Echvi_0342 - ATP-dependent DNA helicase, RecQ family, at 363,196 to 365,118
_0342
Echvi_0343: Echvi_0343 - Enoyl-CoA hydratase/carnithine racemase, at 365,120 to 365,896
_0343
Echvi_0344: Echvi_0344 - ComEC/Rec2-related protein, at 365,962 to 367,920
_0344
Echvi_0345: Echvi_0345 - hypothetical protein, at 368,043 to 368,585
_0345
Echvi_0346: Echvi_0346 - Predicted acyltransferase, at 368,667 to 369,107
_0346
Position (kb) 365
366
367
368 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 365.121 kb on + strand at 365.121 kb on + strand at 365.122 kb on - strand at 365.211 kb on + strand, within Echvi_0343 at 365.211 kb on + strand, within Echvi_0343 at 365.211 kb on + strand, within Echvi_0343 at 365.299 kb on + strand, within Echvi_0343 at 365.369 kb on + strand, within Echvi_0343 at 365.370 kb on - strand, within Echvi_0343 at 365.611 kb on + strand, within Echvi_0343 at 365.612 kb on - strand, within Echvi_0343 at 365.612 kb on - strand, within Echvi_0343 at 365.612 kb on - strand, within Echvi_0343 at 365.613 kb on + strand, within Echvi_0343 at 365.613 kb on + strand, within Echvi_0343 at 365.614 kb on - strand, within Echvi_0343 at 365.614 kb on - strand, within Echvi_0343 at 365.614 kb on - strand, within Echvi_0343 at 365.672 kb on - strand, within Echvi_0343 at 365.854 kb on - strand at 365.913 kb on + strand at 365.914 kb on - strand at 365.914 kb on - strand at 365.923 kb on + strand at 365.980 kb on + strand at 366.048 kb on - strand at 366.066 kb on + strand at 366.126 kb on - strand at 366.181 kb on - strand, within Echvi_0344 at 366.213 kb on - strand, within Echvi_0344 at 366.213 kb on - strand, within Echvi_0344 at 366.272 kb on + strand, within Echvi_0344 at 366.272 kb on + strand, within Echvi_0344 at 366.273 kb on - strand, within Echvi_0344 at 366.273 kb on - strand, within Echvi_0344 at 366.300 kb on + strand, within Echvi_0344 at 366.300 kb on + strand, within Echvi_0344 at 366.301 kb on - strand, within Echvi_0344 at 366.302 kb on + strand, within Echvi_0344 at 366.302 kb on + strand, within Echvi_0344 at 366.302 kb on + strand, within Echvi_0344 at 366.303 kb on - strand, within Echvi_0344 at 366.303 kb on - strand, within Echvi_0344 at 366.309 kb on - strand, within Echvi_0344 at 366.310 kb on + strand, within Echvi_0344 at 366.310 kb on + strand, within Echvi_0344 at 366.311 kb on - strand, within Echvi_0344 at 366.311 kb on - strand, within Echvi_0344 at 366.311 kb on - strand, within Echvi_0344 at 366.311 kb on - strand, within Echvi_0344 at 366.389 kb on + strand, within Echvi_0344 at 366.395 kb on + strand, within Echvi_0344 at 366.396 kb on - strand, within Echvi_0344 at 366.396 kb on - strand, within Echvi_0344 at 366.396 kb on - strand, within Echvi_0344 at 366.425 kb on + strand, within Echvi_0344 at 366.476 kb on + strand, within Echvi_0344 at 366.541 kb on + strand, within Echvi_0344 at 366.693 kb on - strand, within Echvi_0344 at 366.695 kb on + strand, within Echvi_0344 at 366.696 kb on - strand, within Echvi_0344 at 366.761 kb on + strand, within Echvi_0344 at 366.761 kb on + strand, within Echvi_0344 at 366.762 kb on - strand, within Echvi_0344 at 366.762 kb on - strand, within Echvi_0344 at 366.762 kb on - strand, within Echvi_0344 at 366.771 kb on + strand, within Echvi_0344 at 366.772 kb on - strand, within Echvi_0344 at 366.836 kb on + strand, within Echvi_0344 at 366.864 kb on + strand, within Echvi_0344 at 366.865 kb on - strand, within Echvi_0344 at 366.869 kb on + strand, within Echvi_0344 at 366.869 kb on + strand, within Echvi_0344 at 366.869 kb on + strand, within Echvi_0344 at 366.870 kb on - strand, within Echvi_0344 at 366.912 kb on + strand, within Echvi_0344 at 366.913 kb on - strand, within Echvi_0344 at 367.025 kb on - strand, within Echvi_0344 at 367.109 kb on + strand, within Echvi_0344 at 367.113 kb on + strand, within Echvi_0344 at 367.113 kb on + strand, within Echvi_0344 at 367.126 kb on + strand, within Echvi_0344 at 367.169 kb on + strand, within Echvi_0344 at 367.170 kb on - strand, within Echvi_0344 at 367.294 kb on + strand, within Echvi_0344 at 367.294 kb on + strand, within Echvi_0344 at 367.321 kb on - strand, within Echvi_0344 at 367.321 kb on - strand, within Echvi_0344 at 367.371 kb on - strand, within Echvi_0344 at 367.499 kb on + strand, within Echvi_0344 at 367.550 kb on + strand, within Echvi_0344 at 367.550 kb on + strand, within Echvi_0344 at 367.551 kb on - strand, within Echvi_0344 at 367.554 kb on + strand, within Echvi_0344 at 367.619 kb on + strand, within Echvi_0344 at 367.619 kb on + strand, within Echvi_0344 at 367.676 kb on - strand, within Echvi_0344 at 367.683 kb on + strand, within Echvi_0344 at 367.746 kb on + strand at 367.839 kb on + strand at 367.856 kb on + strand at 367.856 kb on + strand at 367.856 kb on + strand at 367.856 kb on + strand at 367.856 kb on + strand at 367.856 kb on + strand at 367.857 kb on - strand at 367.857 kb on - strand at 367.857 kb on - strand at 367.857 kb on - strand at 367.889 kb on + strand at 367.889 kb on + strand at 367.890 kb on - strand at 367.890 kb on - strand at 367.944 kb on - strand at 367.944 kb on - strand at 367.944 kb on - strand at 367.954 kb on - strand at 368.029 kb on + strand at 368.044 kb on + strand at 368.077 kb on - strand at 368.133 kb on + strand, within Echvi_0345 at 368.133 kb on + strand, within Echvi_0345 at 368.134 kb on - strand, within Echvi_0345 at 368.177 kb on - strand, within Echvi_0345 at 368.270 kb on + strand, within Echvi_0345 at 368.270 kb on + strand, within Echvi_0345 at 368.271 kb on - strand, within Echvi_0345 at 368.271 kb on - strand, within Echvi_0345 at 368.287 kb on + strand, within Echvi_0345 at 368.287 kb on + strand, within Echvi_0345 at 368.287 kb on + strand, within Echvi_0345 at 368.287 kb on + strand, within Echvi_0345 at 368.288 kb on - strand, within Echvi_0345 at 368.288 kb on - strand, within Echvi_0345 at 368.288 kb on - strand, within Echvi_0345 at 368.288 kb on - strand, within Echvi_0345 at 368.291 kb on + strand, within Echvi_0345 at 368.291 kb on + strand, within Echvi_0345 at 368.291 kb on + strand, within Echvi_0345 at 368.291 kb on + strand, within Echvi_0345 at 368.291 kb on + strand, within Echvi_0345 at 368.292 kb on - strand, within Echvi_0345 at 368.384 kb on + strand, within Echvi_0345 at 368.483 kb on + strand, within Echvi_0345 at 368.484 kb on - strand, within Echvi_0345 at 368.484 kb on - strand, within Echvi_0345 at 368.533 kb on + strand at 368.534 kb on - strand at 368.567 kb on + strand at 368.568 kb on - strand at 368.568 kb on - strand at 368.568 kb on - strand at 368.571 kb on + strand at 368.571 kb on + strand at 368.572 kb on - strand at 368.572 kb on - strand at 368.575 kb on - strand at 368.590 kb on + strand at 368.594 kb on + strand at 368.594 kb on + strand at 368.653 kb on + strand at 368.674 kb on + strand at 368.749 kb on + strand, within Echvi_0346 at 368.750 kb on - strand, within Echvi_0346 at 368.782 kb on + strand, within Echvi_0346 at 368.782 kb on + strand, within Echvi_0346 at 368.782 kb on + strand, within Echvi_0346 at 368.782 kb on + strand, within Echvi_0346 at 368.782 kb on + strand, within Echvi_0346 at 368.831 kb on + strand, within Echvi_0346
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.2 mg/ml remove 365,121 + -0.2 365,121 + +0.5 365,122 - +0.1 365,211 + Echvi_0343 0.12 +1.1 365,211 + Echvi_0343 0.12 +1.9 365,211 + Echvi_0343 0.12 +0.3 365,299 + Echvi_0343 0.23 +0.2 365,369 + Echvi_0343 0.32 +0.7 365,370 - Echvi_0343 0.32 -0.5 365,611 + Echvi_0343 0.63 -1.8 365,612 - Echvi_0343 0.63 -1.1 365,612 - Echvi_0343 0.63 -0.5 365,612 - Echvi_0343 0.63 -0.1 365,613 + Echvi_0343 0.63 -0.1 365,613 + Echvi_0343 0.63 +0.2 365,614 - Echvi_0343 0.64 +1.1 365,614 - Echvi_0343 0.64 -1.5 365,614 - Echvi_0343 0.64 -1.2 365,672 - Echvi_0343 0.71 -3.1 365,854 - -1.3 365,913 + -2.3 365,914 - -0.4 365,914 - -2.5 365,923 + -0.4 365,980 + +0.1 366,048 - -1.3 366,066 + -0.3 366,126 - -2.5 366,181 - Echvi_0344 0.11 -1.0 366,213 - Echvi_0344 0.13 +1.4 366,213 - Echvi_0344 0.13 -1.7 366,272 + Echvi_0344 0.16 -1.3 366,272 + Echvi_0344 0.16 -1.4 366,273 - Echvi_0344 0.16 -0.1 366,273 - Echvi_0344 0.16 -0.4 366,300 + Echvi_0344 0.17 +2.1 366,300 + Echvi_0344 0.17 -1.8 366,301 - Echvi_0344 0.17 +0.5 366,302 + Echvi_0344 0.17 +0.2 366,302 + Echvi_0344 0.17 +0.8 366,302 + Echvi_0344 0.17 +0.6 366,303 - Echvi_0344 0.17 -1.5 366,303 - Echvi_0344 0.17 +0.3 366,309 - Echvi_0344 0.18 +0.2 366,310 + Echvi_0344 0.18 -0.0 366,310 + Echvi_0344 0.18 +0.7 366,311 - Echvi_0344 0.18 -0.0 366,311 - Echvi_0344 0.18 -0.8 366,311 - Echvi_0344 0.18 -1.6 366,311 - Echvi_0344 0.18 -0.0 366,389 + Echvi_0344 0.22 -0.0 366,395 + Echvi_0344 0.22 +0.6 366,396 - Echvi_0344 0.22 +0.6 366,396 - Echvi_0344 0.22 -1.9 366,396 - Echvi_0344 0.22 -0.9 366,425 + Echvi_0344 0.24 -0.4 366,476 + Echvi_0344 0.26 +0.5 366,541 + Echvi_0344 0.30 +0.5 366,693 - Echvi_0344 0.37 -2.7 366,695 + Echvi_0344 0.37 -0.1 366,696 - Echvi_0344 0.37 -0.4 366,761 + Echvi_0344 0.41 -1.6 366,761 + Echvi_0344 0.41 +0.4 366,762 - Echvi_0344 0.41 -1.4 366,762 - Echvi_0344 0.41 -0.7 366,762 - Echvi_0344 0.41 -0.0 366,771 + Echvi_0344 0.41 -0.3 366,772 - Echvi_0344 0.41 -0.7 366,836 + Echvi_0344 0.45 -0.5 366,864 + Echvi_0344 0.46 -1.0 366,865 - Echvi_0344 0.46 -1.3 366,869 + Echvi_0344 0.46 -0.6 366,869 + Echvi_0344 0.46 -0.4 366,869 + Echvi_0344 0.46 +1.1 366,870 - Echvi_0344 0.46 -0.3 366,912 + Echvi_0344 0.48 -0.6 366,913 - Echvi_0344 0.49 -0.4 367,025 - Echvi_0344 0.54 +1.1 367,109 + Echvi_0344 0.59 +2.1 367,113 + Echvi_0344 0.59 +0.1 367,113 + Echvi_0344 0.59 -0.6 367,126 + Echvi_0344 0.59 -0.6 367,169 + Echvi_0344 0.62 +0.0 367,170 - Echvi_0344 0.62 -0.6 367,294 + Echvi_0344 0.68 -0.3 367,294 + Echvi_0344 0.68 +0.5 367,321 - Echvi_0344 0.69 +0.1 367,321 - Echvi_0344 0.69 -0.5 367,371 - Echvi_0344 0.72 -0.5 367,499 + Echvi_0344 0.78 +1.7 367,550 + Echvi_0344 0.81 -0.7 367,550 + Echvi_0344 0.81 -1.7 367,551 - Echvi_0344 0.81 -0.7 367,554 + Echvi_0344 0.81 -0.6 367,619 + Echvi_0344 0.85 -0.1 367,619 + Echvi_0344 0.85 +0.9 367,676 - Echvi_0344 0.87 -0.1 367,683 + Echvi_0344 0.88 +1.3 367,746 + +0.1 367,839 + -0.1 367,856 + -0.5 367,856 + +0.9 367,856 + +2.1 367,856 + -0.5 367,856 + +1.2 367,856 + +2.1 367,857 - -2.4 367,857 - -0.2 367,857 - -0.2 367,857 - -0.0 367,889 + -0.5 367,889 + -0.5 367,890 - -0.6 367,890 - +0.1 367,944 - -0.1 367,944 - -1.7 367,944 - -2.8 367,954 - -1.5 368,029 + -0.5 368,044 + +0.2 368,077 - +0.7 368,133 + Echvi_0345 0.17 -0.8 368,133 + Echvi_0345 0.17 -0.6 368,134 - Echvi_0345 0.17 -0.1 368,177 - Echvi_0345 0.25 -0.0 368,270 + Echvi_0345 0.42 -1.1 368,270 + Echvi_0345 0.42 +1.1 368,271 - Echvi_0345 0.42 +1.4 368,271 - Echvi_0345 0.42 +0.8 368,287 + Echvi_0345 0.45 -0.9 368,287 + Echvi_0345 0.45 +1.3 368,287 + Echvi_0345 0.45 -0.2 368,287 + Echvi_0345 0.45 -0.4 368,288 - Echvi_0345 0.45 -0.9 368,288 - Echvi_0345 0.45 -0.3 368,288 - Echvi_0345 0.45 +1.6 368,288 - Echvi_0345 0.45 -0.3 368,291 + Echvi_0345 0.46 -1.2 368,291 + Echvi_0345 0.46 -0.3 368,291 + Echvi_0345 0.46 -3.1 368,291 + Echvi_0345 0.46 +0.6 368,291 + Echvi_0345 0.46 +0.5 368,292 - Echvi_0345 0.46 +1.6 368,384 + Echvi_0345 0.63 +0.1 368,483 + Echvi_0345 0.81 +0.2 368,484 - Echvi_0345 0.81 -1.1 368,484 - Echvi_0345 0.81 -0.5 368,533 + -1.5 368,534 - -0.7 368,567 + -1.0 368,568 - +1.8 368,568 - +0.2 368,568 - +1.0 368,571 + -1.6 368,571 + -0.2 368,572 - +0.3 368,572 - -0.8 368,575 - +0.1 368,590 + -0.5 368,594 + -0.3 368,594 + -1.7 368,653 + -1.8 368,674 + +2.1 368,749 + Echvi_0346 0.19 +0.5 368,750 - Echvi_0346 0.19 -0.1 368,782 + Echvi_0346 0.26 +3.6 368,782 + Echvi_0346 0.26 -1.6 368,782 + Echvi_0346 0.26 +1.1 368,782 + Echvi_0346 0.26 +0.2 368,782 + Echvi_0346 0.26 -0.4 368,831 + Echvi_0346 0.37 -2.0
Or see this region's nucleotide sequence