Experiment: m.b. Carbenicillin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0175 and Echvi_0176 are separated by 29 nucleotides Echvi_0176 and Echvi_0177 overlap by 4 nucleotides
Echvi_0175: Echvi_0175 - hypothetical protein, at 186,056 to 191,896
_0175
Echvi_0176: Echvi_0176 - conserved repeat domain, at 191,926 to 193,527
_0176
Echvi_0177: Echvi_0177 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 193,524 to 195,848
_0177
Position (kb) 191
192
193
194 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 191.199 kb on + strand, within Echvi_0175 at 191.199 kb on + strand, within Echvi_0175 at 191.199 kb on + strand, within Echvi_0175 at 191.199 kb on + strand, within Echvi_0175 at 191.199 kb on + strand, within Echvi_0175 at 191.199 kb on + strand, within Echvi_0175 at 191.205 kb on + strand, within Echvi_0175 at 191.252 kb on + strand, within Echvi_0175 at 191.273 kb on + strand, within Echvi_0175 at 191.296 kb on + strand, within Echvi_0175 at 191.297 kb on - strand, within Echvi_0175 at 191.298 kb on + strand, within Echvi_0175 at 191.298 kb on + strand, within Echvi_0175 at 191.299 kb on - strand, within Echvi_0175 at 191.302 kb on + strand, within Echvi_0175 at 191.302 kb on + strand, within Echvi_0175 at 191.302 kb on + strand, within Echvi_0175 at 191.309 kb on - strand, within Echvi_0175 at 191.319 kb on + strand at 191.320 kb on - strand at 191.322 kb on + strand at 191.323 kb on - strand at 191.324 kb on + strand at 191.325 kb on - strand at 191.342 kb on - strand at 191.342 kb on - strand at 191.350 kb on + strand at 191.354 kb on + strand at 191.354 kb on + strand at 191.386 kb on + strand at 191.396 kb on - strand at 191.409 kb on - strand at 191.420 kb on + strand at 191.421 kb on - strand at 191.457 kb on + strand at 191.458 kb on - strand at 191.458 kb on - strand at 191.461 kb on + strand at 191.461 kb on + strand at 191.461 kb on + strand at 191.461 kb on + strand at 191.462 kb on - strand at 191.462 kb on - strand at 191.462 kb on - strand at 191.462 kb on - strand at 191.510 kb on + strand at 191.511 kb on - strand at 191.527 kb on + strand at 191.531 kb on + strand at 191.532 kb on - strand at 191.554 kb on + strand at 191.554 kb on + strand at 191.554 kb on + strand at 191.554 kb on + strand at 191.555 kb on - strand at 191.559 kb on + strand at 191.583 kb on + strand at 191.583 kb on + strand at 191.583 kb on + strand at 191.583 kb on + strand at 191.583 kb on + strand at 191.583 kb on + strand at 191.584 kb on - strand at 191.584 kb on - strand at 191.584 kb on - strand at 191.586 kb on - strand at 191.586 kb on - strand at 191.586 kb on - strand at 191.586 kb on - strand at 191.587 kb on - strand at 191.599 kb on + strand at 191.599 kb on + strand at 191.599 kb on + strand at 191.600 kb on - strand at 191.600 kb on - strand at 191.640 kb on + strand at 191.641 kb on - strand at 191.641 kb on - strand at 191.650 kb on - strand at 191.652 kb on + strand at 191.652 kb on + strand at 191.653 kb on - strand at 191.665 kb on + strand at 191.666 kb on - strand at 191.666 kb on - strand at 191.674 kb on + strand at 191.675 kb on - strand at 191.675 kb on - strand at 191.675 kb on - strand at 191.675 kb on - strand at 191.683 kb on + strand at 191.683 kb on + strand at 191.684 kb on - strand at 191.684 kb on - strand at 191.686 kb on + strand at 191.686 kb on + strand at 191.686 kb on + strand at 191.686 kb on + strand at 191.686 kb on + strand at 191.686 kb on + strand at 191.686 kb on + strand at 191.687 kb on - strand at 191.687 kb on - strand at 191.687 kb on - strand at 191.687 kb on - strand at 191.687 kb on - strand at 191.687 kb on - strand at 191.688 kb on + strand at 191.688 kb on + strand at 191.688 kb on + strand at 191.688 kb on + strand at 191.689 kb on - strand at 191.689 kb on - strand at 191.689 kb on - strand at 191.693 kb on + strand at 191.720 kb on + strand at 191.720 kb on + strand at 191.721 kb on - strand at 191.740 kb on + strand at 191.834 kb on + strand at 191.834 kb on + strand at 191.903 kb on - strand at 191.931 kb on + strand at 191.931 kb on + strand at 192.005 kb on - strand at 192.017 kb on + strand at 192.018 kb on - strand at 192.018 kb on - strand at 192.024 kb on - strand at 192.027 kb on + strand at 192.034 kb on + strand at 192.037 kb on + strand at 192.065 kb on + strand at 192.082 kb on + strand at 192.083 kb on - strand at 192.184 kb on - strand, within Echvi_0176 at 192.184 kb on - strand, within Echvi_0176 at 192.192 kb on + strand, within Echvi_0176 at 192.217 kb on - strand, within Echvi_0176 at 192.217 kb on - strand, within Echvi_0176 at 192.219 kb on + strand, within Echvi_0176 at 192.246 kb on + strand, within Echvi_0176 at 192.247 kb on - strand, within Echvi_0176 at 192.270 kb on + strand, within Echvi_0176 at 192.289 kb on + strand, within Echvi_0176 at 192.290 kb on - strand, within Echvi_0176 at 192.385 kb on + strand, within Echvi_0176 at 192.399 kb on - strand, within Echvi_0176 at 192.424 kb on - strand, within Echvi_0176 at 192.483 kb on + strand, within Echvi_0176 at 192.649 kb on + strand, within Echvi_0176 at 192.661 kb on + strand, within Echvi_0176 at 192.814 kb on + strand, within Echvi_0176 at 192.814 kb on + strand, within Echvi_0176 at 192.823 kb on + strand, within Echvi_0176 at 192.833 kb on + strand, within Echvi_0176 at 192.858 kb on + strand, within Echvi_0176 at 192.858 kb on + strand, within Echvi_0176 at 192.870 kb on + strand, within Echvi_0176 at 192.918 kb on + strand, within Echvi_0176 at 192.919 kb on - strand, within Echvi_0176 at 192.923 kb on + strand, within Echvi_0176 at 192.971 kb on + strand, within Echvi_0176 at 192.971 kb on + strand, within Echvi_0176 at 192.994 kb on + strand, within Echvi_0176 at 192.996 kb on + strand, within Echvi_0176 at 192.997 kb on - strand, within Echvi_0176 at 193.005 kb on + strand, within Echvi_0176 at 193.005 kb on + strand, within Echvi_0176 at 193.006 kb on - strand, within Echvi_0176 at 193.006 kb on - strand, within Echvi_0176 at 193.008 kb on + strand, within Echvi_0176 at 193.027 kb on + strand, within Echvi_0176 at 193.045 kb on - strand, within Echvi_0176 at 193.063 kb on + strand, within Echvi_0176 at 193.064 kb on - strand, within Echvi_0176 at 193.112 kb on - strand, within Echvi_0176 at 193.125 kb on + strand, within Echvi_0176 at 193.150 kb on + strand, within Echvi_0176 at 193.150 kb on + strand, within Echvi_0176 at 193.150 kb on + strand, within Echvi_0176 at 193.151 kb on - strand, within Echvi_0176 at 193.151 kb on - strand, within Echvi_0176 at 193.188 kb on + strand, within Echvi_0176 at 193.188 kb on + strand, within Echvi_0176 at 193.189 kb on - strand, within Echvi_0176 at 193.189 kb on - strand, within Echvi_0176 at 193.191 kb on + strand, within Echvi_0176 at 193.209 kb on + strand, within Echvi_0176 at 193.209 kb on + strand, within Echvi_0176 at 193.210 kb on - strand, within Echvi_0176 at 193.210 kb on - strand, within Echvi_0176 at 193.295 kb on + strand, within Echvi_0176 at 193.335 kb on - strand, within Echvi_0176 at 193.352 kb on - strand, within Echvi_0176 at 193.352 kb on - strand, within Echvi_0176 at 193.404 kb on + strand at 193.504 kb on + strand at 193.505 kb on - strand at 193.515 kb on + strand at 193.515 kb on + strand at 193.517 kb on + strand at 193.517 kb on + strand at 193.517 kb on + strand at 193.518 kb on - strand at 193.518 kb on - strand at 193.518 kb on - strand at 193.522 kb on + strand at 193.542 kb on + strand at 193.543 kb on - strand at 193.638 kb on - strand at 193.666 kb on + strand at 193.667 kb on - strand at 193.667 kb on - strand at 193.707 kb on - strand at 193.791 kb on + strand, within Echvi_0177 at 193.791 kb on + strand, within Echvi_0177 at 193.792 kb on - strand, within Echvi_0177 at 193.860 kb on + strand, within Echvi_0177 at 193.860 kb on + strand, within Echvi_0177 at 193.860 kb on + strand, within Echvi_0177 at 193.861 kb on - strand, within Echvi_0177 at 193.882 kb on + strand, within Echvi_0177 at 194.071 kb on + strand, within Echvi_0177 at 194.071 kb on + strand, within Echvi_0177 at 194.117 kb on - strand, within Echvi_0177 at 194.117 kb on - strand, within Echvi_0177 at 194.178 kb on + strand, within Echvi_0177 at 194.178 kb on + strand, within Echvi_0177 at 194.251 kb on + strand, within Echvi_0177 at 194.251 kb on + strand, within Echvi_0177 at 194.251 kb on + strand, within Echvi_0177 at 194.368 kb on + strand, within Echvi_0177 at 194.444 kb on + strand, within Echvi_0177 at 194.445 kb on - strand, within Echvi_0177 at 194.454 kb on + strand, within Echvi_0177 at 194.455 kb on - strand, within Echvi_0177 at 194.513 kb on + strand, within Echvi_0177 at 194.514 kb on - strand, within Echvi_0177
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.2 mg/ml remove 191,199 + Echvi_0175 0.88 +0.2 191,199 + Echvi_0175 0.88 +0.6 191,199 + Echvi_0175 0.88 -1.0 191,199 + Echvi_0175 0.88 -0.1 191,199 + Echvi_0175 0.88 -0.7 191,199 + Echvi_0175 0.88 -0.3 191,205 + Echvi_0175 0.88 -0.1 191,252 + Echvi_0175 0.89 -1.7 191,273 + Echvi_0175 0.89 +1.4 191,296 + Echvi_0175 0.90 -0.8 191,297 - Echvi_0175 0.90 +0.5 191,298 + Echvi_0175 0.90 -1.1 191,298 + Echvi_0175 0.90 -2.2 191,299 - Echvi_0175 0.90 -0.5 191,302 + Echvi_0175 0.90 -0.0 191,302 + Echvi_0175 0.90 -0.0 191,302 + Echvi_0175 0.90 -1.1 191,309 - Echvi_0175 0.90 +1.5 191,319 + -1.0 191,320 - -0.4 191,322 + -1.7 191,323 - -0.9 191,324 + -1.8 191,325 - -1.8 191,342 - +0.8 191,342 - -0.0 191,350 + -0.5 191,354 + -0.8 191,354 + +0.0 191,386 + +0.3 191,396 - +1.1 191,409 - +0.5 191,420 + -0.0 191,421 - -1.3 191,457 + -0.6 191,458 - -1.1 191,458 - +1.0 191,461 + -0.4 191,461 + +0.1 191,461 + -2.4 191,461 + +0.5 191,462 - -0.3 191,462 - +0.2 191,462 - -0.3 191,462 - +0.1 191,510 + +0.8 191,511 - -0.4 191,527 + -0.3 191,531 + -0.7 191,532 - -1.4 191,554 + -0.0 191,554 + +0.6 191,554 + +0.6 191,554 + +1.0 191,555 - -0.7 191,559 + -0.3 191,583 + +0.0 191,583 + +0.8 191,583 + -0.5 191,583 + -0.5 191,583 + -0.2 191,583 + +1.2 191,584 - +0.2 191,584 - +1.0 191,584 - +0.4 191,586 - +0.8 191,586 - +1.0 191,586 - +0.5 191,586 - -0.5 191,587 - +1.5 191,599 + +1.1 191,599 + -0.4 191,599 + +1.0 191,600 - +0.2 191,600 - +0.7 191,640 + -0.4 191,641 - -1.0 191,641 - -0.1 191,650 - -0.8 191,652 + +0.7 191,652 + -0.3 191,653 - -0.5 191,665 + -1.1 191,666 - -0.1 191,666 - -0.3 191,674 + -1.8 191,675 - +1.3 191,675 - +0.0 191,675 - +0.0 191,675 - +0.0 191,683 + +0.6 191,683 + -0.6 191,684 - -0.4 191,684 - +0.5 191,686 + +0.6 191,686 + +0.4 191,686 + -1.2 191,686 + -1.3 191,686 + +0.0 191,686 + -0.4 191,686 + +0.6 191,687 - -1.7 191,687 - -0.4 191,687 - -1.0 191,687 - +0.0 191,687 - +0.0 191,687 - +0.0 191,688 + -0.3 191,688 + +1.7 191,688 + -0.5 191,688 + -0.2 191,689 - -0.2 191,689 - -0.4 191,689 - -1.4 191,693 + -1.5 191,720 + -1.0 191,720 + +0.1 191,721 - +0.2 191,740 + -0.4 191,834 + -0.6 191,834 + -1.4 191,903 - -2.6 191,931 + -0.3 191,931 + +0.9 192,005 - -0.3 192,017 + -2.0 192,018 - -0.7 192,018 - -1.3 192,024 - +4.0 192,027 + +2.0 192,034 + +0.5 192,037 + +0.8 192,065 + +0.2 192,082 + +0.9 192,083 - -2.7 192,184 - Echvi_0176 0.16 -0.9 192,184 - Echvi_0176 0.16 +0.5 192,192 + Echvi_0176 0.17 -1.3 192,217 - Echvi_0176 0.18 -0.7 192,217 - Echvi_0176 0.18 -0.3 192,219 + Echvi_0176 0.18 -0.3 192,246 + Echvi_0176 0.20 -0.4 192,247 - Echvi_0176 0.20 +0.5 192,270 + Echvi_0176 0.21 +0.9 192,289 + Echvi_0176 0.23 +0.5 192,290 - Echvi_0176 0.23 +0.5 192,385 + Echvi_0176 0.29 -0.5 192,399 - Echvi_0176 0.30 -1.7 192,424 - Echvi_0176 0.31 -0.4 192,483 + Echvi_0176 0.35 -2.0 192,649 + Echvi_0176 0.45 -0.7 192,661 + Echvi_0176 0.46 -1.5 192,814 + Echvi_0176 0.55 -1.1 192,814 + Echvi_0176 0.55 +0.2 192,823 + Echvi_0176 0.56 -0.8 192,833 + Echvi_0176 0.57 -0.7 192,858 + Echvi_0176 0.58 +2.0 192,858 + Echvi_0176 0.58 -0.1 192,870 + Echvi_0176 0.59 +0.2 192,918 + Echvi_0176 0.62 +2.0 192,919 - Echvi_0176 0.62 -0.8 192,923 + Echvi_0176 0.62 -0.4 192,971 + Echvi_0176 0.65 -0.2 192,971 + Echvi_0176 0.65 -0.1 192,994 + Echvi_0176 0.67 +0.1 192,996 + Echvi_0176 0.67 -2.0 192,997 - Echvi_0176 0.67 +1.3 193,005 + Echvi_0176 0.67 -1.3 193,005 + Echvi_0176 0.67 -1.3 193,006 - Echvi_0176 0.67 -1.2 193,006 - Echvi_0176 0.67 -0.6 193,008 + Echvi_0176 0.68 -0.4 193,027 + Echvi_0176 0.69 -1.0 193,045 - Echvi_0176 0.70 -0.2 193,063 + Echvi_0176 0.71 +0.8 193,064 - Echvi_0176 0.71 +0.2 193,112 - Echvi_0176 0.74 -1.6 193,125 + Echvi_0176 0.75 -1.4 193,150 + Echvi_0176 0.76 -1.7 193,150 + Echvi_0176 0.76 -0.1 193,150 + Echvi_0176 0.76 +0.5 193,151 - Echvi_0176 0.76 +0.5 193,151 - Echvi_0176 0.76 -2.4 193,188 + Echvi_0176 0.79 +0.3 193,188 + Echvi_0176 0.79 +0.9 193,189 - Echvi_0176 0.79 -0.7 193,189 - Echvi_0176 0.79 -1.3 193,191 + Echvi_0176 0.79 +2.2 193,209 + Echvi_0176 0.80 +0.0 193,209 + Echvi_0176 0.80 +2.6 193,210 - Echvi_0176 0.80 -0.8 193,210 - Echvi_0176 0.80 -2.4 193,295 + Echvi_0176 0.85 +0.0 193,335 - Echvi_0176 0.88 +0.1 193,352 - Echvi_0176 0.89 -0.7 193,352 - Echvi_0176 0.89 -0.3 193,404 + +0.3 193,504 + -1.6 193,505 - +1.0 193,515 + -0.7 193,515 + -2.1 193,517 + +0.5 193,517 + +0.3 193,517 + -1.3 193,518 - -0.2 193,518 - +0.9 193,518 - -0.7 193,522 + +0.2 193,542 + -1.1 193,543 - +2.0 193,638 - -1.1 193,666 + +1.5 193,667 - +2.0 193,667 - -1.0 193,707 - +1.0 193,791 + Echvi_0177 0.11 -0.8 193,791 + Echvi_0177 0.11 +2.6 193,792 - Echvi_0177 0.12 -1.0 193,860 + Echvi_0177 0.14 -0.4 193,860 + Echvi_0177 0.14 -1.5 193,860 + Echvi_0177 0.14 -1.9 193,861 - Echvi_0177 0.14 +1.8 193,882 + Echvi_0177 0.15 -1.3 194,071 + Echvi_0177 0.24 -1.9 194,071 + Echvi_0177 0.24 +0.8 194,117 - Echvi_0177 0.26 -0.5 194,117 - Echvi_0177 0.26 -1.7 194,178 + Echvi_0177 0.28 -0.4 194,178 + Echvi_0177 0.28 -1.0 194,251 + Echvi_0177 0.31 -1.0 194,251 + Echvi_0177 0.31 -0.3 194,251 + Echvi_0177 0.31 -0.2 194,368 + Echvi_0177 0.36 +0.1 194,444 + Echvi_0177 0.40 -0.3 194,445 - Echvi_0177 0.40 -0.6 194,454 + Echvi_0177 0.40 -0.7 194,455 - Echvi_0177 0.40 -1.4 194,513 + Echvi_0177 0.43 -0.4 194,514 - Echvi_0177 0.43 -0.3
Or see this region's nucleotide sequence