Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0154

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
155,197	+		Echvi_0153	0.34	-0.2
155,203	+		Echvi_0153	0.35	+0.0
155,222	-		Echvi_0153	0.36	+0.0
155,229	+		Echvi_0153	0.37	-1.3
155,446	+		Echvi_0153	0.52	-0.3
155,471	+		Echvi_0153	0.54	+0.4
155,471	+		Echvi_0153	0.54	-1.3
155,471	+		Echvi_0153	0.54	-2.1
155,471	+		Echvi_0153	0.54	-0.4
155,471	+		Echvi_0153	0.54	-0.0
155,471	+		Echvi_0153	0.54	+0.0
155,471	+		Echvi_0153	0.54	-1.8
155,472	-		Echvi_0153	0.54	+0.4
155,472	-		Echvi_0153	0.54	+0.1
155,473	+		Echvi_0153	0.54	-0.7
155,474	-		Echvi_0153	0.54	-0.8
155,475	+		Echvi_0153	0.54	+0.0
155,475	+		Echvi_0153	0.54	-0.1
155,475	+		Echvi_0153	0.54	+0.0
155,475	+		Echvi_0153	0.54	+0.2
155,475	+		Echvi_0153	0.54	+0.8
155,476	-		Echvi_0153	0.54	-0.2
155,525	-		Echvi_0153	0.58	+0.0
155,665	+		Echvi_0153	0.67	-0.2
155,683	-		Echvi_0153	0.69	-0.4
155,722	+		Echvi_0153	0.71	-1.0
155,726	+		Echvi_0153	0.72	-1.1
155,726	+		Echvi_0153	0.72	+0.7
155,726	+		Echvi_0153	0.72	-0.7
155,726	+		Echvi_0153	0.72	-1.1
155,727	-		Echvi_0153	0.72	-0.3
155,727	-		Echvi_0153	0.72	-0.3
155,769	+		Echvi_0153	0.75	+0.0
155,788	+		Echvi_0153	0.76	-0.7
155,789	-		Echvi_0153	0.76	-0.8
155,825	+		Echvi_0153	0.79	-0.4
155,946	-		Echvi_0153	0.87	+0.9
155,946	-		Echvi_0153	0.87	+0.5
155,959	+		Echvi_0153	0.88	-1.2
155,980	+		Echvi_0153	0.90	-1.0
155,980	+		Echvi_0153	0.90	-0.3
155,980	+		Echvi_0153	0.90	-0.5
156,016	+				-0.2
156,056	-				+1.4
156,065	+				+0.1
156,065	+				+2.0
156,115	+				-0.4
156,125	-				-0.4
156,147	+				-0.6
156,147	+				+0.0
156,147	+				+1.7
156,148	-				+2.3
156,148	-				+1.0
156,148	-				+0.2
156,148	-				+0.5
156,218	+				+0.7
156,224	-				+0.7
156,293	-		Echvi_0154	0.11	-0.4
156,398	+		Echvi_0154	0.22	-1.0
156,399	-		Echvi_0154	0.22	+1.5
156,399	-		Echvi_0154	0.22	+0.9
156,417	-		Echvi_0154	0.24	+0.9
156,427	-		Echvi_0154	0.25	+0.2
156,436	+		Echvi_0154	0.26	-0.6
156,436	+		Echvi_0154	0.26	-0.5
156,436	+		Echvi_0154	0.26	+0.5
156,464	-		Echvi_0154	0.28	+1.8
156,512	+		Echvi_0154	0.33	+0.7
156,516	+		Echvi_0154	0.34	-0.1
156,516	+		Echvi_0154	0.34	+0.0
156,517	-		Echvi_0154	0.34	+3.6
156,584	-		Echvi_0154	0.41	+1.1
156,635	+		Echvi_0154	0.46	+0.4
156,636	-		Echvi_0154	0.46	+1.1
156,663	+		Echvi_0154	0.49	+0.2
156,663	+				+0.0
156,669	-		Echvi_0154	0.49	+0.5
156,669	-		Echvi_0154	0.49	-0.3
156,684	+		Echvi_0154	0.51	-0.8
156,689	+		Echvi_0154	0.51	+1.2
156,690	-		Echvi_0154	0.51	+0.6
156,984	+		Echvi_0154	0.81	+0.0
157,133	-				+0.0
157,133	-				+1.1
157,138	+				-2.0
157,151	-				+0.6
157,152	+				-1.3
157,152	+				-0.3
157,152	+				-0.2
157,199	+				+0.4
157,200	-				+0.7
157,276	+		Echvi_0155	0.13	-0.1
157,277	-		Echvi_0155	0.13	+1.3
157,592	+		Echvi_0155	0.51	-0.4
157,592	+		Echvi_0155	0.51	+0.3
157,592	+		Echvi_0155	0.51	-1.1
157,609	+		Echvi_0155	0.53	+0.2
157,622	+		Echvi_0155	0.55	-0.1
157,626	+		Echvi_0155	0.56	+0.3
157,626	+		Echvi_0155	0.56	+1.5
157,661	-		Echvi_0155	0.60	+2.0
157,661	-		Echvi_0155	0.60	+0.0
157,784	+		Echvi_0155	0.75	+0.6
157,785	-		Echvi_0155	0.75	+0.1
157,835	+		Echvi_0155	0.81	+0.5
158,002	+				+0.9
158,041	-				+0.5
158,049	+				+0.7
158,057	+				-0.3
158,058	-				+1.6
158,084	+				-0.8
158,160	-		Echvi_0156	0.17	+0.8