Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0060

Experiment: m.b. Carbenicillin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.2 mg/ml
57,991	+				-1.4
57,991	+				-1.0
57,991	+				+0.9
57,992	-				-0.2
58,003	-				-0.5
58,015	+				+1.2
58,015	+				-0.5
58,016	-				-1.7
58,016	-				-0.5
58,021	+				-0.8
58,022	-				+0.2
58,024	+				-0.5
58,024	+				+0.2
58,025	-				-1.9
58,025	-				+0.0
58,025	-				-0.6
58,058	+				-0.4
58,087	-				-0.5
58,097	-				-0.3
58,154	+		Echvi_0060	0.11	-0.4
58,155	-		Echvi_0060	0.11	+0.0
58,155	-		Echvi_0060	0.11	-1.1
58,213	+		Echvi_0060	0.14	+0.5
58,217	+		Echvi_0060	0.14	+1.0
58,386	+		Echvi_0060	0.23	-0.0
58,386	+		Echvi_0060	0.23	+1.0
58,386	+		Echvi_0060	0.23	+0.5
58,414	+		Echvi_0060	0.24	-1.1
58,415	-		Echvi_0060	0.24	-0.6
58,476	-		Echvi_0060	0.28	-0.0
58,537	-		Echvi_0060	0.31	+0.0
58,558	-		Echvi_0060	0.32	+0.6
58,589	+		Echvi_0060	0.34	+0.8
58,589	+		Echvi_0060	0.34	+1.0
58,640	+		Echvi_0060	0.36	-1.0
58,640	+		Echvi_0060	0.36	-1.0
58,641	-		Echvi_0060	0.37	-1.0
58,645	+		Echvi_0060	0.37	-1.5
58,714	-		Echvi_0060	0.40	-0.8
58,755	+		Echvi_0060	0.43	-1.6
58,757	+		Echvi_0060	0.43	-1.5
58,757	+		Echvi_0060	0.43	+0.1
58,758	-		Echvi_0060	0.43	+0.0
58,758	-		Echvi_0060	0.43	-0.1
58,758	-		Echvi_0060	0.43	+1.0
58,758	-		Echvi_0060	0.43	+0.5
58,758	-		Echvi_0060	0.43	-1.4
58,763	-		Echvi_0060	0.43	-0.3
58,786	+		Echvi_0060	0.44	-0.1
58,786	+		Echvi_0060	0.44	-0.3
58,859	-		Echvi_0060	0.48	-0.5
58,879	-		Echvi_0060	0.49	-1.9
58,906	+		Echvi_0060	0.51	+0.9
58,934	-		Echvi_0060	0.52	+0.5
59,033	+		Echvi_0060	0.57	-1.0
59,051	+		Echvi_0060	0.58	+1.0
59,080	+		Echvi_0060	0.60	+2.0
59,132	+		Echvi_0060	0.63	+0.5
59,132	+		Echvi_0060	0.63	+1.2
59,132	+		Echvi_0060	0.63	-0.2
59,133	-		Echvi_0060	0.63	-2.2
59,133	-		Echvi_0060	0.63	-0.9
59,165	-		Echvi_0060	0.64	+0.2
59,197	+		Echvi_0060	0.66	-0.5
59,200	+		Echvi_0060	0.66	+1.6
59,200	+		Echvi_0060	0.66	+0.2
59,201	-		Echvi_0060	0.66	-0.6
59,211	-		Echvi_0060	0.67	-0.3
59,408	-		Echvi_0060	0.77	+0.5
59,408	-		Echvi_0060	0.77	+1.6
59,408	-		Echvi_0060	0.77	-0.0
59,408	-		Echvi_0060	0.77	-0.6
59,437	-		Echvi_0060	0.79	+0.0
59,446	-		Echvi_0060	0.79	+1.5
59,472	-		Echvi_0060	0.81	+0.6
59,504	+		Echvi_0060	0.83	-0.3
59,504	+		Echvi_0060	0.83	-1.7
59,504	+		Echvi_0060	0.83	+0.0
59,540	+		Echvi_0060	0.84	+0.4
59,584	+		Echvi_0060	0.87	+0.4
59,584	+		Echvi_0060	0.87	-0.3
59,584	+		Echvi_0060	0.87	-0.8
59,585	-		Echvi_0060	0.87	-1.4
59,585	-		Echvi_0060	0.87	+0.8
59,585	-		Echvi_0060	0.87	+0.1
59,585	-		Echvi_0060	0.87	-0.3
59,627	+		Echvi_0060	0.89	-1.1
59,682	-				-1.0
59,682	-				+0.8
59,734	+				-0.7
59,767	-				-0.6
59,789	+				-0.9
59,832	-				-0.9
59,835	-				+0.4
59,935	+				-0.8
59,935	+				+0.6
59,936	-				-0.2
60,009	-				+0.2
60,029	+				-1.0
60,045	+				-0.5
60,061	+				+0.0
60,061	+				-0.3
60,062	-				+0.4
60,084	+				+1.0
60,085	-				+0.0
60,085	-				+0.5
60,085	-				-0.5
60,085	-				+1.0
60,085	-				-1.4
60,088	+				-0.9
60,088	+				-1.1
60,088	+				-0.6
60,088	+				+0.2
60,089	-				-2.0
60,089	-				-1.1
60,089	-				+0.4
60,165	-		Echvi_0061	0.17	-0.1
60,172	-		Echvi_0061	0.19	-0.5
60,184	+		Echvi_0061	0.21	-0.1
60,185	-		Echvi_0061	0.21	-0.4
60,185	-		Echvi_0061	0.21	-0.7
60,185	-		Echvi_0061	0.21	-1.0
60,185	-		Echvi_0061	0.21	-0.5
60,238	-		Echvi_0061	0.30	+0.9
60,238	-		Echvi_0061	0.30	+0.2
60,298	+		Echvi_0061	0.39	-0.1
60,298	+		Echvi_0061	0.39	+0.1
60,310	+		Echvi_0061	0.41	-2.3
60,311	-		Echvi_0061	0.42	+1.0
60,411	-		Echvi_0061	0.58	+0.1
60,465	+		Echvi_0061	0.67	-1.5
60,466	-		Echvi_0061	0.67	+0.6
60,484	-		Echvi_0061	0.70	-1.1
60,484	-		Echvi_0061	0.70	-0.6
60,525	-		Echvi_0061	0.77	+1.0
60,567	+		Echvi_0061	0.84	-0.4
60,567	+		Echvi_0061	0.84	-0.1
60,568	-		Echvi_0061	0.84	-1.0
60,568	-		Echvi_0061	0.84	-0.7
60,586	-		Echvi_0061	0.87	+0.8
60,589	-		Echvi_0061	0.88	+0.5
60,595	-		Echvi_0061	0.89	-0.5
60,595	-		Echvi_0061	0.89	-0.7
60,595	-		Echvi_0061	0.89	+0.0
60,605	+				+1.5
60,605	+				-1.1
60,606	-				-0.9
60,646	-				-0.2
60,653	+				-0.9
60,653	+				-0.8
60,654	-				-1.3
60,654	-				-0.8
60,658	+				+0.5
60,688	+				+1.0
60,688	+				-1.1
60,692	-				+1.6
60,692	-				+0.5
60,722	+				+0.2
60,723	-				-0.4
60,746	-				-1.3
60,767	+		Echvi_0062	0.10	-2.1
60,791	+		Echvi_0062	0.12	+0.5
60,792	-		Echvi_0062	0.12	-0.1
60,795	-		Echvi_0062	0.13	+2.2
60,821	-		Echvi_0062	0.15	-0.7
60,829	-		Echvi_0062	0.16	-0.3