Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4502

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
5,377,251	-		Echvi_4499	0.69	+0.2
5,377,265	-		Echvi_4499	0.71	-0.9
5,377,367	+		Echvi_4499	0.83	-0.8
5,377,395	-		Echvi_4499	0.86	-1.1
5,377,414	+		Echvi_4499	0.88	+0.9
5,377,415	-		Echvi_4499	0.88	-0.1
5,377,426	+		Echvi_4499	0.90	-1.7
5,377,427	-		Echvi_4499	0.90	+0.7
5,377,429	+				+0.1
5,377,429	+				-1.9
5,377,430	-				+0.4
5,377,430	-				-0.2
5,377,430	-				-1.0
5,377,430	-				-0.5
5,377,430	-				-1.6
5,377,515	-				-0.3
5,377,515	-				+0.3
5,377,574	+				-2.1
5,377,574	+				-0.4
5,377,576	+				+0.3
5,377,576	+				-0.5
5,377,577	-				-1.2
5,377,577	-				+1.4
5,377,581	+				+0.5
5,377,581	+				+1.4
5,377,588	-				-0.1
5,377,588	-				+0.4
5,377,640	+				+0.3
5,377,640	+				+1.3
5,377,640	+				+2.1
5,377,641	-				+0.1
5,377,647	-				+0.9
5,377,647	-				+0.3
5,377,745	-		Echvi_4500	0.31	+1.4
5,377,795	-		Echvi_4500	0.43	-1.4
5,377,795	-		Echvi_4500	0.43	-0.1
5,377,862	+		Echvi_4500	0.60	+0.9
5,377,903	+		Echvi_4500	0.70	+0.3
5,377,960	-		Echvi_4500	0.84	+1.5
5,377,971	+		Echvi_4500	0.87	+0.4
5,378,117	-				+0.4
5,378,133	+				+0.1
5,378,153	+				+0.1
5,378,154	-				+1.6
5,378,154	-				-0.4
5,378,239	-		Echvi_4502	0.15	-1.6
5,378,343	+		Echvi_4502	0.27	+0.4
5,378,344	-		Echvi_4502	0.27	+1.1
5,378,363	+		Echvi_4502	0.30	-1.1
5,378,374	+		Echvi_4502	0.31	-2.3
5,378,376	+		Echvi_4502	0.31	+1.8
5,378,376	+		Echvi_4502	0.31	+0.0
5,378,376	+		Echvi_4502	0.31	-1.0
5,378,377	-		Echvi_4502	0.31	-1.1
5,378,377	-		Echvi_4502	0.31	-0.4
5,378,377	-		Echvi_4502	0.31	-0.4
5,378,377	-		Echvi_4502	0.31	+0.1
5,378,377	-		Echvi_4502	0.31	-0.3
5,378,466	+		Echvi_4502	0.42	-1.1
5,378,523	+		Echvi_4502	0.49	-0.9
5,378,523	+		Echvi_4502	0.49	+0.4
5,378,523	+		Echvi_4502	0.49	-0.9
5,378,523	+		Echvi_4502	0.49	-0.3
5,378,524	-		Echvi_4502	0.49	-0.7
5,378,524	-		Echvi_4502	0.49	+0.3
5,378,524	-		Echvi_4502	0.49	-1.2
5,378,524	-		Echvi_4502	0.49	-0.5
5,378,534	+		Echvi_4502	0.50	-0.1
5,378,534	+		Echvi_4502	0.50	-1.6
5,378,755	+		Echvi_4502	0.77	-0.2
5,378,756	-		Echvi_4502	0.77	-0.1
5,378,763	-		Echvi_4502	0.78	+0.1
5,378,763	-		Echvi_4502	0.78	-0.9
5,378,782	-		Echvi_4502	0.80	-0.7
5,378,782	-		Echvi_4502	0.80	+0.3
5,378,826	+		Echvi_4502	0.85	-0.0
5,378,901	-				-0.4
5,378,967	+				-0.3
5,378,968	-				-0.7
5,378,971	+				-0.2
5,378,971	+				-1.3
5,378,971	+				-0.1
5,378,971	+				+0.5
5,379,026	+				-1.1
5,379,026	+				-2.1
5,379,027	-				-0.5
5,379,099	+		Echvi_4503	0.11	-1.0
5,379,099	+		Echvi_4503	0.11	+0.3
5,379,100	-		Echvi_4503	0.11	+1.4
5,379,100	-		Echvi_4503	0.11	-1.2
5,379,131	+		Echvi_4503	0.13	-0.0
5,379,169	+		Echvi_4503	0.16	-0.3
5,379,278	+		Echvi_4503	0.23	-0.2
5,379,278	+		Echvi_4503	0.23	+2.0
5,379,279	-		Echvi_4503	0.24	-0.1
5,379,351	+		Echvi_4503	0.29	-0.8
5,379,352	-		Echvi_4503	0.29	+1.1
5,379,352	-		Echvi_4503	0.29	+0.0
5,379,352	-		Echvi_4503	0.29	-0.0
5,379,437	-		Echvi_4503	0.35	-0.9
5,379,473	+		Echvi_4503	0.37	-0.1
5,379,473	+		Echvi_4503	0.37	-1.0
5,379,474	-		Echvi_4503	0.37	-0.1
5,379,580	+		Echvi_4503	0.45	-0.0
5,379,580	+		Echvi_4503	0.45	+0.1
5,379,584	+		Echvi_4503	0.45	-1.0
5,379,585	-		Echvi_4503	0.45	-0.9
5,379,612	-		Echvi_4503	0.47	-0.8
5,379,622	-		Echvi_4503	0.48	-0.4
5,379,623	+		Echvi_4503	0.48	+0.8
5,379,623	+		Echvi_4503	0.48	-0.2
5,379,624	-		Echvi_4503	0.48	+1.6
5,379,630	-		Echvi_4503	0.49	+0.4
5,379,630	-		Echvi_4503	0.49	+1.9
5,379,659	-		Echvi_4503	0.51	-0.0
5,379,714	+		Echvi_4503	0.55	+0.8
5,379,715	-		Echvi_4503	0.55	+0.1
5,379,761	+		Echvi_4503	0.58	-0.2
5,379,860	+		Echvi_4503	0.65	-0.0
5,379,860	+		Echvi_4503	0.65	-0.0
5,379,869	+		Echvi_4503	0.66	+1.0
5,379,870	-		Echvi_4503	0.66	-0.4
5,379,870	-		Echvi_4503	0.66	+0.6
5,379,870	-		Echvi_4503	0.66	+0.4
5,379,870	-		Echvi_4503	0.66	-0.4
5,379,870	-		Echvi_4503	0.66	-0.0
5,379,884	+		Echvi_4503	0.67	-0.5
5,379,884	+		Echvi_4503	0.67	-0.8
5,379,884	+		Echvi_4503	0.67	+1.6
5,379,885	-		Echvi_4503	0.67	-1.4
5,379,885	-		Echvi_4503	0.67	-0.4
5,379,937	+		Echvi_4503	0.71	-0.5
5,379,937	+		Echvi_4503	0.71	-0.7