Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3178

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
3,782,166	-		Echvi_3176	0.47	-0.8
3,782,185	-		Echvi_3176	0.49	+0.8
3,782,233	+		Echvi_3176	0.52	+0.8
3,782,302	-		Echvi_3176	0.58	-1.5
3,782,337	+		Echvi_3176	0.60	+0.4
3,782,337	+		Echvi_3176	0.60	-1.5
3,782,396	+		Echvi_3176	0.65	+1.0
3,782,396	+		Echvi_3176	0.65	+0.0
3,782,396	+		Echvi_3176	0.65	-0.9
3,782,397	-		Echvi_3176	0.65	-0.3
3,782,397	-		Echvi_3176	0.65	-0.3
3,782,397	-		Echvi_3176	0.65	+0.4
3,782,453	+		Echvi_3176	0.69	-1.2
3,782,462	+		Echvi_3176	0.70	+0.6
3,782,463	-		Echvi_3176	0.70	-0.8
3,782,464	+		Echvi_3176	0.70	+0.0
3,782,464	+		Echvi_3176	0.70	-0.6
3,782,465	-		Echvi_3176	0.70	-0.0
3,782,596	+		Echvi_3176	0.80	-1.0
3,782,596	+		Echvi_3176	0.80	+0.0
3,782,633	+		Echvi_3176	0.82	+0.5
3,782,633	+		Echvi_3176	0.82	+0.7
3,782,633	+		Echvi_3176	0.82	+0.5
3,782,711	+		Echvi_3176	0.88	-0.0
3,782,711	+		Echvi_3176	0.88	-0.8
3,782,711	+		Echvi_3176	0.88	+0.2
3,782,711	+		Echvi_3176	0.88	-2.8
3,782,712	-		Echvi_3176	0.88	+1.5
3,782,712	-		Echvi_3176	0.88	+1.2
3,782,724	+		Echvi_3176	0.89	-0.3
3,782,725	-		Echvi_3176	0.89	-0.2
3,782,725	-		Echvi_3176	0.89	+0.3
3,782,745	+				-0.1
3,782,745	+				-0.6
3,782,745	+				+0.7
3,782,746	-				+0.4
3,782,798	+				-0.1
3,782,799	-				+2.0
3,782,898	+		Echvi_3177	0.15	+2.2
3,782,899	-		Echvi_3177	0.16	+0.3
3,782,964	+		Echvi_3177	0.38	-1.1
3,783,003	+		Echvi_3177	0.52	-0.1
3,783,004	-		Echvi_3177	0.52	-1.9
3,783,044	+		Echvi_3177	0.66	+0.4
3,783,046	+		Echvi_3177	0.67	-1.9
3,783,046	+		Echvi_3177	0.67	-0.1
3,783,047	-		Echvi_3177	0.67	+0.3
3,783,054	-		Echvi_3177	0.69	+1.2
3,783,145	-				-3.2
3,783,156	+				-0.7
3,783,158	+				-0.9
3,783,179	+				-0.8
3,783,179	+				-0.4
3,783,254	+		Echvi_3178	0.23	-1.1
3,783,345	+		Echvi_3178	0.44	-0.1
3,783,359	-		Echvi_3178	0.48	-0.3
3,783,359	-				+2.5
3,783,359	-		Echvi_3178	0.48	-0.2
3,783,359	-		Echvi_3178	0.48	-0.4
3,783,361	+		Echvi_3178	0.48	-0.8
3,783,361	+		Echvi_3178	0.48	-1.1
3,783,361	+		Echvi_3178	0.48	-0.2
3,783,368	+		Echvi_3178	0.50	-1.8
3,783,402	+		Echvi_3178	0.58	+0.5
3,783,413	+		Echvi_3178	0.60	-0.3
3,783,466	-		Echvi_3178	0.72	-0.0
3,783,526	+		Echvi_3178	0.86	-0.4
3,783,527	-		Echvi_3178	0.87	-1.3
3,783,528	+		Echvi_3178	0.87	+0.3
3,783,528	+		Echvi_3178	0.87	-0.2
3,783,528	+		Echvi_3178	0.87	+0.1
3,783,529	-		Echvi_3178	0.87	-1.1
3,783,529	-		Echvi_3178	0.87	+1.5
3,783,542	-				-0.5
3,783,584	+				+0.1
3,783,584	+				-0.6
3,783,584	+				-0.6
3,783,585	-				+0.0
3,783,706	+		Echvi_3179	0.18	-0.6
3,783,706	+		Echvi_3179	0.18	+0.6
3,783,780	+		Echvi_3179	0.29	+0.1
3,783,780	+		Echvi_3179	0.29	-0.3
3,783,852	+		Echvi_3179	0.41	+0.5
3,783,855	+		Echvi_3179	0.42	-0.4
3,783,879	+		Echvi_3179	0.45	-0.2
3,783,882	+		Echvi_3179	0.46	+0.5
3,783,883	-		Echvi_3179	0.46	-1.7
3,783,886	+		Echvi_3179	0.46	-1.6
3,783,887	-		Echvi_3179	0.47	-1.3
3,783,887	-		Echvi_3179	0.47	+0.3
3,783,961	+		Echvi_3179	0.58	-0.3
3,784,018	+		Echvi_3179	0.68	+0.0
3,784,120	+		Echvi_3179	0.84	+1.5
3,784,120	+		Echvi_3179	0.84	+1.5
3,784,120	+		Echvi_3179	0.84	+0.9
3,784,120	+		Echvi_3179	0.84	-0.9
3,784,120	+		Echvi_3179	0.84	-0.6
3,784,121	-		Echvi_3179	0.84	+0.4
3,784,121	-		Echvi_3179	0.84	+0.3
3,784,121	-		Echvi_3179	0.84	+0.9
3,784,123	-		Echvi_3179	0.84	-0.8
3,784,154	+		Echvi_3179	0.89	+0.4
3,784,164	+				-0.7
3,784,165	-				+1.5
3,784,423	+		Echvi_3180	0.18	-0.3
3,784,423	+		Echvi_3180	0.18	+0.0
3,784,432	+		Echvi_3180	0.19	+1.2
3,784,434	+		Echvi_3180	0.19	-0.8
3,784,434	+		Echvi_3180	0.19	-0.1
3,784,434	+		Echvi_3180	0.19	-0.1
3,784,434	+		Echvi_3180	0.19	+0.3
3,784,434	+		Echvi_3180	0.19	-1.8
3,784,435	-		Echvi_3180	0.19	+0.1
3,784,435	-		Echvi_3180	0.19	+0.1
3,784,435	-		Echvi_3180	0.19	-2.6
3,784,556	+		Echvi_3180	0.31	+1.5
3,784,557	-		Echvi_3180	0.32	-1.8
3,784,561	-		Echvi_3180	0.32	+0.9
3,784,573	-		Echvi_3180	0.33	+1.5