Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2289

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
2,711,907	+		Echvi_2288	0.43	+0.5
2,711,908	-		Echvi_2288	0.43	-0.8
2,711,957	-		Echvi_2288	0.47	-0.2
2,711,982	+		Echvi_2288	0.49	-0.1
2,712,060	-		Echvi_2288	0.56	-0.9
2,712,061	+		Echvi_2288	0.56	-1.1
2,712,061	+		Echvi_2288	0.56	+3.5
2,712,061	+		Echvi_2288	0.56	-0.5
2,712,061	+		Echvi_2288	0.56	+0.8
2,712,061	+		Echvi_2288	0.56	-0.6
2,712,062	-		Echvi_2288	0.56	-0.9
2,712,062	-		Echvi_2288	0.56	-1.5
2,712,085	-		Echvi_2288	0.58	+0.1
2,712,092	-		Echvi_2288	0.58	+0.1
2,712,094	+		Echvi_2288	0.59	+0.2
2,712,095	-		Echvi_2288	0.59	-0.3
2,712,095	-		Echvi_2288	0.59	-0.5
2,712,104	+		Echvi_2288	0.59	-0.5
2,712,104	+		Echvi_2288	0.59	-0.1
2,712,105	-		Echvi_2288	0.60	+0.5
2,712,190	+		Echvi_2288	0.67	+0.5
2,712,190	+		Echvi_2288	0.67	+0.4
2,712,191	-		Echvi_2288	0.67	-0.8
2,712,191	-		Echvi_2288	0.67	+0.0
2,712,191	-		Echvi_2288	0.67	-0.2
2,712,191	-		Echvi_2288	0.67	+0.3
2,712,212	-		Echvi_2288	0.68	-0.1
2,712,326	+		Echvi_2288	0.78	+1.0
2,712,377	+		Echvi_2288	0.82	+0.5
2,712,406	-		Echvi_2288	0.84	-0.0
2,712,481	-				-0.4
2,712,576	-				+0.6
2,712,598	-				-0.2
2,712,604	-				+1.4
2,712,604	-				-1.2
2,712,610	-				-0.0
2,712,610	-				+0.5
2,712,610	-				+0.6
2,712,646	-				-0.5
2,712,647	+				+0.1
2,712,713	-				-0.6
2,712,850	+				+0.7
2,712,877	-				-0.1
2,712,882	+				-0.6
2,712,890	-				+0.2
2,712,890	-				+0.2
2,713,041	+		Echvi_2289	0.27	+0.8
2,713,041	+		Echvi_2289	0.27	-0.9
2,713,045	+		Echvi_2289	0.27	+1.4
2,713,045	+		Echvi_2289	0.27	-0.0
2,713,045	+		Echvi_2289	0.27	+1.0
2,713,046	-		Echvi_2289	0.27	-0.0
2,713,085	+		Echvi_2289	0.34	+1.4
2,713,085	+		Echvi_2289	0.34	+0.6
2,713,085	+		Echvi_2289	0.34	+0.4
2,713,086	-		Echvi_2289	0.34	+2.1
2,713,086	-		Echvi_2289	0.34	+0.5
2,713,086	-		Echvi_2289	0.34	+0.0
2,713,156	+		Echvi_2289	0.46	-0.9
2,713,157	-		Echvi_2289	0.47	+0.4
2,713,157	-		Echvi_2289	0.47	+1.1
2,713,291	-		Echvi_2289	0.70	+3.1
2,713,356	+		Echvi_2289	0.81	-1.8
2,713,356	+		Echvi_2289	0.81	+1.2
2,713,378	-		Echvi_2289	0.85	+1.0
2,713,466	-				-1.2
2,713,466	-				-0.1
2,713,638	+		Echvi_2290	0.25	+0.7
2,713,639	-		Echvi_2290	0.25	-0.2
2,713,639	-		Echvi_2290	0.25	-0.1
2,713,679	+		Echvi_2290	0.31	+1.5
2,713,684	+		Echvi_2290	0.32	+0.9
2,713,684	+		Echvi_2290	0.32	-0.1
2,713,685	-		Echvi_2290	0.32	-0.6
2,713,760	+		Echvi_2290	0.44	-0.5
2,713,763	+		Echvi_2290	0.44	+1.0
2,713,801	+		Echvi_2290	0.50	-0.0
2,713,801	+		Echvi_2290	0.50	+0.2
2,713,802	-		Echvi_2290	0.50	-1.2
2,713,817	-		Echvi_2290	0.52	-0.4
2,713,936	+		Echvi_2290	0.70	+0.1
2,713,984	-		Echvi_2290	0.78	+0.0
2,714,010	-		Echvi_2290	0.82	+0.2
2,714,176	+				-0.1
2,714,176	+				-0.3
2,714,187	+				+1.0
2,714,188	-				+2.0
2,714,343	+		Echvi_2291	0.24	+1.0
2,714,432	+		Echvi_2291	0.35	-0.8