Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1861

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
2,180,370	-				-0.3
2,180,382	-				+0.1
2,180,426	-				+0.1
2,180,435	+				+0.6
2,180,435	+				-0.1
2,180,450	-				-0.2
2,180,457	+				-0.1
2,180,457	+				+0.3
2,180,509	+				-0.9
2,180,509	+				+0.7
2,180,510	-				+0.7
2,180,530	+				-0.1
2,180,530	+				-0.5
2,180,530	+				+0.5
2,180,533	+				-0.6
2,180,534	-				-1.9
2,180,593	+				-0.7
2,180,593	+				-0.1
2,180,594	-				+0.1
2,180,594	-				+0.4
2,180,597	+				-0.1
2,180,649	-				+2.6
2,180,660	+				+0.1
2,180,664	-				+0.1
2,180,744	-				-0.2
2,180,761	+				+0.5
2,180,771	-				-1.5
2,180,771	-				-0.6
2,180,794	+				+0.6
2,180,795	-				+1.0
2,180,806	-				+0.5
2,180,820	-				+0.2
2,180,841	-				-0.8
2,180,864	-				+0.3
2,180,868	-				+1.3
2,180,868	-				+0.2
2,180,871	-				-0.0
2,181,117	+				+1.6
2,181,117	+				+0.2
2,181,118	-				-0.5
2,181,118	-				-1.1
2,181,121	-				-0.8
2,181,128	+				-0.5
2,181,128	+				-0.0
2,181,129	-				-0.4
2,181,130	+				+0.0
2,181,131	-				-0.2
2,181,131	-				-1.4
2,181,158	+				-1.1
2,181,166	+				-0.1
2,181,166	+				-1.2
2,181,167	-				-0.5
2,181,170	-				-0.6
2,181,195	-				-0.7
2,181,285	+				+1.1
2,181,285	+				+0.2
2,181,285	+				-1.1
2,181,285	+				-0.4
2,181,289	+				-1.5
2,181,289	+				+0.2
2,181,289	+				-0.4
2,181,290	-				-0.8
2,181,292	+				-0.4
2,181,293	-				-2.0
2,181,293	-				-1.2
2,181,293	-				+1.1
2,181,293	-				-0.8
2,181,295	+				+0.3
2,181,296	-				-0.3
2,181,303	+				-0.9
2,181,303	+				-1.7
2,181,304	-				+0.9
2,181,304	-				-0.4
2,181,304	-				-0.8
2,181,304	-				-0.1
2,181,358	+				-0.6
2,181,359	-				+0.1
2,181,412	+		Echvi_1861	0.14	-0.6
2,181,412	+		Echvi_1861	0.14	-0.4
2,181,412	+		Echvi_1861	0.14	-1.4
2,181,464	+		Echvi_1861	0.19	-0.2
2,181,465	-		Echvi_1861	0.19	-0.7
2,181,465	-		Echvi_1861	0.19	-0.6
2,181,467	-		Echvi_1861	0.20	-0.2
2,181,497	-		Echvi_1861	0.23	+1.1
2,181,541	-		Echvi_1861	0.27	+0.6
2,181,541	-		Echvi_1861	0.27	-0.6
2,181,601	+		Echvi_1861	0.33	-0.2
2,181,602	-		Echvi_1861	0.33	-1.6
2,181,623	+		Echvi_1861	0.35	-0.0
2,181,625	+		Echvi_1861	0.36	-0.6
2,181,635	+		Echvi_1861	0.37	-3.1
2,181,635	+		Echvi_1861	0.37	+0.1
2,181,635	+		Echvi_1861	0.37	-0.1
2,181,657	-		Echvi_1861	0.39	-0.9
2,181,730	+		Echvi_1861	0.46	-2.2
2,181,731	-		Echvi_1861	0.46	+1.1
2,181,784	+		Echvi_1861	0.52	+0.5
2,181,785	-		Echvi_1861	0.52	-1.0
2,181,788	+		Echvi_1861	0.52	+0.5
2,181,788	+		Echvi_1861	0.52	+0.6
2,181,788	+		Echvi_1861	0.52	-0.2
2,181,788	+		Echvi_1861	0.52	+1.5
2,181,789	-		Echvi_1861	0.52	-2.3
2,181,789	-		Echvi_1861	0.52	+0.3
2,181,789	-		Echvi_1861	0.52	-0.9
2,181,789	-		Echvi_1861	0.52	-1.1
2,181,789	-		Echvi_1861	0.52	-0.5
2,181,789	-		Echvi_1861	0.52	+0.6
2,181,789	-		Echvi_1861	0.52	-0.4
2,181,790	+		Echvi_1861	0.52	-2.4
2,181,790	+		Echvi_1861	0.52	+0.2
2,181,790	+		Echvi_1861	0.52	-0.9
2,181,790	+		Echvi_1861	0.52	-0.1
2,181,790	+		Echvi_1861	0.52	-1.2
2,181,790	+		Echvi_1861	0.52	+0.5
2,181,791	-		Echvi_1861	0.53	-0.4
2,181,791	-		Echvi_1861	0.53	-2.7
2,181,791	-		Echvi_1861	0.53	-0.7
2,181,791	-		Echvi_1861	0.53	-0.7
2,181,791	-		Echvi_1861	0.53	+0.1
2,181,791	-		Echvi_1861	0.53	-0.9
2,181,901	+		Echvi_1861	0.64	-1.1
2,181,902	-		Echvi_1861	0.64	+0.3
2,181,902	-		Echvi_1861	0.64	+0.1
2,181,902	-		Echvi_1861	0.64	-0.9
2,181,910	+		Echvi_1861	0.65	-0.6
2,181,911	-		Echvi_1861	0.65	-1.6
2,181,911	-		Echvi_1861	0.65	-2.2
2,181,951	-		Echvi_1861	0.69	-0.4
2,181,952	+		Echvi_1861	0.69	-1.5
2,181,953	-		Echvi_1861	0.69	-0.3
2,182,047	+		Echvi_1861	0.79	-0.7
2,182,048	-		Echvi_1861	0.79	-0.5
2,182,159	+				+0.1
2,182,160	-				-0.5
2,182,160	-				+0.3
2,182,161	+				+0.2
2,182,161	+				+0.1
2,182,161	+				-0.3
2,182,162	-				-1.0
2,182,162	-				-1.5
2,182,162	-				-1.4
2,182,162	-				-0.0
2,182,162	-				-1.1
2,182,162	-				-0.4
2,182,193	+				+0.4
2,182,194	-				-1.1
2,182,194	-				-1.0
2,182,226	+				+0.1
2,182,226	+				-0.4
2,182,226	+				+1.6
2,182,227	-				+0.6
2,182,227	-				-1.1
2,182,286	+				+2.6
2,182,361	+				-0.5
2,182,361	+				-0.4
2,182,361	+				-0.0
2,182,361	+				-0.0
2,182,361	+				+0.4
2,182,362	-				-1.0
2,182,362	-				-0.4
2,182,386	-		Echvi_1862	0.10	-0.0
2,182,390	+		Echvi_1862	0.11	+1.4
2,182,390	+		Echvi_1862	0.11	-1.5
2,182,391	-		Echvi_1862	0.11	-1.2
2,182,603	-		Echvi_1862	0.40	-0.4
2,182,604	+		Echvi_1862	0.40	-0.5
2,182,689	+		Echvi_1862	0.51	+0.5
2,182,690	-		Echvi_1862	0.51	-0.1
2,182,690	-		Echvi_1862	0.51	+0.8
2,182,694	-		Echvi_1862	0.52	-1.3
2,182,715	-		Echvi_1862	0.55	+0.4
2,182,734	+		Echvi_1862	0.57	+0.2
2,182,735	-		Echvi_1862	0.57	-0.6
2,182,768	+		Echvi_1862	0.62	-0.0
2,182,769	-		Echvi_1862	0.62	-0.2
2,182,769	-		Echvi_1862	0.62	-1.2
2,182,769	-		Echvi_1862	0.62	+0.2
2,182,788	+		Echvi_1862	0.65	-0.9
2,182,810	+		Echvi_1862	0.68	-1.1
2,182,810	+		Echvi_1862	0.68	+1.3
2,182,810	+		Echvi_1862	0.68	-0.0
2,182,810	+		Echvi_1862	0.68	-0.4
2,182,847	-		Echvi_1862	0.73	-0.5
2,182,847	-		Echvi_1862	0.73	-1.6
2,182,889	+		Echvi_1862	0.78	-0.1
2,182,893	-		Echvi_1862	0.79	-0.9
2,182,935	+		Echvi_1862	0.84	+0.5
2,182,953	+		Echvi_1862	0.87	-1.0
2,182,957	-		Echvi_1862	0.87	-1.2
2,182,968	+		Echvi_1862	0.89	+0.9
2,183,073	-				-0.7
2,183,073	-				-1.1
2,183,077	-				+0.5
2,183,103	+				+0.0
2,183,103	+				+1.0
2,183,104	-				+0.2
2,183,104	-				-0.5
2,183,181	+				+1.2