Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1550

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
1,777,208	+		Echvi_1549	0.32	-1.6
1,777,211	+		Echvi_1549	0.32	-0.6
1,777,212	-		Echvi_1549	0.32	-0.7
1,777,212	-		Echvi_1549	0.32	-0.3
1,777,215	+		Echvi_1549	0.33	-0.4
1,777,216	-		Echvi_1549	0.33	-1.0
1,777,216	-		Echvi_1549	0.33	+0.6
1,777,216	-		Echvi_1549	0.33	-0.4
1,777,216	-				+0.0
1,777,237	-		Echvi_1549	0.34	-0.5
1,777,237	-		Echvi_1549	0.34	-0.3
1,777,351	+		Echvi_1549	0.43	-0.5
1,777,356	+		Echvi_1549	0.43	+0.0
1,777,356	+		Echvi_1549	0.43	-0.7
1,777,359	-		Echvi_1549	0.43	+0.8
1,777,373	-		Echvi_1549	0.44	+1.0
1,777,431	-		Echvi_1549	0.49	-0.3
1,777,465	+		Echvi_1549	0.51	+0.0
1,777,466	-		Echvi_1549	0.51	+0.2
1,777,610	+		Echvi_1549	0.62	-1.4
1,777,627	-		Echvi_1549	0.63	-0.5
1,777,629	+		Echvi_1549	0.64	-0.1
1,777,629	+		Echvi_1549	0.64	-0.6
1,777,630	-		Echvi_1549	0.64	+0.4
1,777,658	-		Echvi_1549	0.66	-0.2
1,777,658	-		Echvi_1549	0.66	+0.9
1,777,658	-		Echvi_1549	0.66	-0.8
1,777,662	+		Echvi_1549	0.66	-2.3
1,777,662	+		Echvi_1549	0.66	-1.4
1,777,662	+		Echvi_1549	0.66	-1.6
1,777,663	-		Echvi_1549	0.66	+0.1
1,777,663	-		Echvi_1549	0.66	+0.9
1,777,663	-		Echvi_1549	0.66	-0.7
1,777,714	-		Echvi_1549	0.70	-2.0
1,777,730	-		Echvi_1549	0.71	-0.5
1,777,827	+		Echvi_1549	0.78	-2.3
1,777,827	+		Echvi_1549	0.78	-1.0
1,777,827	+		Echvi_1549	0.78	-1.8
1,777,828	-		Echvi_1549	0.78	+1.6
1,777,829	+		Echvi_1549	0.78	-2.9
1,777,830	-		Echvi_1549	0.79	-1.2
1,777,830	-		Echvi_1549	0.79	+0.6
1,777,886	+		Echvi_1549	0.83	-0.1
1,777,887	-		Echvi_1549	0.83	+1.1
1,778,116	-				-0.5
1,778,127	+				-1.1
1,778,139	+				-0.8
1,778,139	+				-0.4
1,778,139	+				-1.8
1,778,139	+				-2.2
1,778,140	-				-0.9
1,778,153	-				-0.6
1,778,153	-				+0.6
1,778,153	-				-0.9
1,778,168	+				+1.0
1,778,183	+				+0.7
1,778,183	+				+0.0
1,778,184	-				+0.4
1,778,184	-				-0.5
1,778,184	-				+0.3
1,778,184	-				-0.1
1,778,184	-				-0.1
1,778,184	-				-0.7
1,778,194	+				+0.9
1,778,195	-				-1.4
1,778,195	-				-0.2
1,778,197	+				-1.5
1,778,197	+				-1.9
1,778,198	-				+1.1
1,778,198	-				-1.2
1,778,348	+		Echvi_1550	0.17	-0.9
1,778,348	+		Echvi_1550	0.17	-1.3
1,778,416	+		Echvi_1550	0.24	-1.5
1,778,417	-		Echvi_1550	0.24	-2.8
1,778,417	-		Echvi_1550	0.24	-1.7
1,778,417	-		Echvi_1550	0.24	+1.6
1,778,417	-		Echvi_1550	0.24	+0.2
1,778,417	-		Echvi_1550	0.24	-0.2
1,778,418	+		Echvi_1550	0.24	-0.5
1,778,419	-		Echvi_1550	0.24	-0.8
1,778,421	-		Echvi_1550	0.24	-1.4
1,778,421	-		Echvi_1550	0.24	-0.0
1,778,421	-		Echvi_1550	0.24	+0.2
1,778,510	-		Echvi_1550	0.33	-1.0
1,778,544	+		Echvi_1550	0.36	-1.2
1,778,700	+		Echvi_1550	0.51	-0.2
1,778,701	-		Echvi_1550	0.51	+1.9
1,778,702	+		Echvi_1550	0.51	-1.0
1,778,773	+		Echvi_1550	0.58	-2.3
1,778,779	+		Echvi_1550	0.58	-1.4
1,778,779	+		Echvi_1550	0.58	-0.8
1,778,779	+		Echvi_1550	0.58	-1.0
1,778,835	-		Echvi_1550	0.64	+0.1
1,778,835	-		Echvi_1550	0.64	+0.8
1,779,042	-		Echvi_1550	0.83	-0.4
1,779,116	+				-0.5
1,779,116	+				+0.1
1,779,117	-				-0.6
1,779,117	-				-0.1
1,779,119	+				-1.0
1,779,119	+				-1.6
1,779,119	+				-1.2
1,779,119	+				-2.4
1,779,119	+				-0.4
1,779,119	+				-1.5
1,779,120	-				+0.7
1,779,155	+				-1.7
1,779,156	-				+0.9
1,779,156	-				-1.1
1,779,156	-				-0.2
1,779,156	-				-1.4
1,779,179	-				-1.2
1,779,251	-				-0.2
1,779,251	-				-1.4
1,779,280	+				-0.4
1,779,281	-				-1.8
1,779,319	-				-0.3
1,779,320	+				-0.2
1,779,321	-				-1.5
1,779,334	-				-1.6
1,779,463	+				-0.5
1,779,464	-				-0.5
1,779,506	+				-0.6
1,779,507	-				-0.3
1,779,507	-				-0.6
1,779,535	+				-0.7
1,779,617	-		Echvi_1551	0.12	+0.3
1,779,668	+		Echvi_1551	0.14	-0.8
1,779,669	-		Echvi_1551	0.14	-0.7
1,779,752	-		Echvi_1551	0.16	+0.1
1,779,817	-		Echvi_1551	0.18	+0.7
1,779,817	-		Echvi_1551	0.18	-0.4
1,779,970	-		Echvi_1551	0.23	-0.6
1,779,970	-		Echvi_1551	0.23	-1.5
1,780,003	+		Echvi_1551	0.24	-0.5
1,780,047	-		Echvi_1551	0.26	-0.1
1,780,127	-		Echvi_1551	0.28	+0.2
1,780,158	+		Echvi_1551	0.29	-1.4
1,780,158	+		Echvi_1551	0.29	-1.3
1,780,208	+		Echvi_1551	0.31	-0.4