Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1120

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
1,282,682	+		Echvi_1118	0.47	+1.4
1,282,682	+		Echvi_1118	0.47	-0.6
1,282,682	+		Echvi_1118	0.47	+1.7
1,282,683	-		Echvi_1118	0.47	-1.0
1,282,683	-		Echvi_1118	0.47	-0.8
1,282,683	-		Echvi_1118	0.47	-0.2
1,282,683	-		Echvi_1118	0.47	-0.2
1,282,683	-		Echvi_1118	0.47	-0.5
1,282,694	+		Echvi_1118	0.49	+0.1
1,282,723	-		Echvi_1118	0.53	-0.5
1,282,726	-		Echvi_1118	0.54	+0.5
1,282,733	-		Echvi_1118	0.55	-0.1
1,282,779	+		Echvi_1118	0.62	-0.2
1,282,780	-		Echvi_1118	0.62	-0.5
1,282,782	-		Echvi_1118	0.62	-1.2
1,282,827	-		Echvi_1118	0.69	+0.4
1,282,905	+		Echvi_1118	0.81	-0.5
1,282,905	+		Echvi_1118	0.81	+1.8
1,282,906	-		Echvi_1118	0.81	-0.6
1,282,906	-		Echvi_1118	0.81	-0.7
1,282,926	-		Echvi_1118	0.84	-0.8
1,282,928	+		Echvi_1118	0.84	-0.4
1,282,928	+		Echvi_1118	0.84	+0.4
1,282,929	-		Echvi_1118	0.84	-3.0
1,282,929	-		Echvi_1118	0.84	-0.9
1,282,974	+				+0.4
1,282,975	-				-0.6
1,282,975	-				-2.1
1,283,010	-				-0.3
1,283,011	+				+0.1
1,283,012	-				-0.2
1,283,012	-				-0.3
1,283,032	-				-0.2
1,283,061	-				-1.3
1,283,064	+				-0.6
1,283,065	-				-0.3
1,283,065	-				-0.2
1,283,079	+				+1.7
1,283,079	+				+2.7
1,283,096	-				+0.1
1,283,097	+				-0.1
1,283,098	-				-0.3
1,283,098	-				+1.0
1,283,337	-		Echvi_1119	0.51	-1.0
1,283,351	-		Echvi_1119	0.54	-0.9
1,283,373	-		Echvi_1119	0.60	-0.7
1,283,594	+				+0.3
1,283,595	-				-0.6
1,283,597	-				+2.4
1,283,689	-				-0.1
1,283,699	+				-2.3
1,283,700	-				+1.0
1,283,700	-				-0.8
1,283,700	-				-1.1
1,283,703	+				-0.4
1,283,756	+		Echvi_1120	0.12	+1.2
1,283,778	+		Echvi_1120	0.15	-0.2
1,283,821	+		Echvi_1120	0.21	-0.3
1,283,821	+		Echvi_1120	0.21	+0.2
1,283,821	+		Echvi_1120	0.21	-0.2
1,283,826	-		Echvi_1120	0.22	-1.5
1,283,833	+		Echvi_1120	0.23	+0.3
1,283,834	-		Echvi_1120	0.23	-0.2
1,283,834	-		Echvi_1120	0.23	-0.3
1,283,840	+		Echvi_1120	0.24	-0.9
1,283,872	+		Echvi_1120	0.29	-0.6
1,283,907	+		Echvi_1120	0.34	+0.8
1,283,907	+		Echvi_1120	0.34	+0.2
1,283,912	+		Echvi_1120	0.35	-0.1
1,283,913	-		Echvi_1120	0.35	-0.1
1,283,917	+		Echvi_1120	0.36	-1.0
1,283,917	+		Echvi_1120	0.36	-0.5
1,283,918	-		Echvi_1120	0.36	-0.7
1,283,982	-		Echvi_1120	0.46	-0.9
1,283,985	+		Echvi_1120	0.46	+0.7
1,283,985	+		Echvi_1120	0.46	+0.1
1,283,985	+		Echvi_1120	0.46	+0.2
1,283,996	+		Echvi_1120	0.48	+0.2
1,284,041	+		Echvi_1120	0.55	-0.6
1,284,042	-		Echvi_1120	0.55	-1.9
1,284,042	-		Echvi_1120	0.55	+0.2
1,284,071	+		Echvi_1120	0.59	-0.7
1,284,128	+		Echvi_1120	0.68	-0.8
1,284,197	+		Echvi_1120	0.78	-0.1
1,284,197	+		Echvi_1120	0.78	+1.3
1,284,199	+		Echvi_1120	0.79	+0.9
1,284,199	+		Echvi_1120	0.79	-0.2
1,284,200	-		Echvi_1120	0.79	-1.2
1,284,200	-		Echvi_1120	0.79	-1.3
1,284,200	-		Echvi_1120	0.79	+2.1
1,284,200	-		Echvi_1120	0.79	-0.5
1,284,200	-		Echvi_1120	0.79	-1.5
1,284,205	-		Echvi_1120	0.80	-0.8
1,284,264	-		Echvi_1120	0.88	-0.9
1,284,290	-				+0.7
1,284,294	+				+1.3
1,284,294	+				-2.2
1,284,295	-				-0.1
1,284,295	-				+0.1
1,284,295	-				+0.4
1,284,313	+				-1.1
1,284,313	+				+0.2
1,284,314	-				-0.3
1,284,314	-				-1.3
1,284,314	-				-0.2
1,284,314	-				-0.6
1,284,314	-				-0.2
1,284,314	-				-1.2
1,284,314	-				+0.2
1,284,341	+				-2.6
1,284,341	+				+0.6
1,284,341	+				-0.4
1,284,345	-				-1.2
1,284,428	-		Echvi_1121	0.11	-0.5
1,284,428	-		Echvi_1121	0.11	-0.4
1,284,611	-		Echvi_1121	0.35	-0.0
1,284,611	-		Echvi_1121	0.35	+0.7
1,284,611	-		Echvi_1121	0.35	+0.7
1,284,611	-		Echvi_1121	0.35	+0.5
1,284,634	-		Echvi_1121	0.38	-0.2
1,284,656	-		Echvi_1121	0.41	+0.7
1,284,903	+		Echvi_1121	0.74	+1.1
1,284,903	+		Echvi_1121	0.74	-0.2
1,284,903	+		Echvi_1121	0.74	-0.5
1,284,905	+		Echvi_1121	0.74	-0.8
1,284,906	-		Echvi_1121	0.74	+0.3
1,284,906	-		Echvi_1121	0.74	+1.0
1,285,061	-				+1.1
1,285,061	-				-1.5
1,285,105	+				-0.5
1,285,113	-				-0.3
1,285,118	-				-0.6
1,285,120	+				-1.5
1,285,192	+				+0.4
1,285,193	-				-0.5
1,285,193	-				-0.2
1,285,193	-				+0.3
1,285,296	+				-0.3