Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1085

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
1,245,867	+				+0.1
1,245,876	+				-0.4
1,245,877	-				+0.4
1,245,877	-				+1.7
1,245,877	-				+0.6
1,245,907	+				-0.1
1,245,907	+				-0.2
1,245,907	+				-0.4
1,245,908	-				+1.7
1,245,908	-				+0.8
1,245,924	+				-1.0
1,245,925	-				-0.5
1,245,929	+				-0.4
1,245,929	+				-0.5
1,245,929	+				+0.7
1,245,930	-				+1.7
1,245,930	-				-0.2
1,245,931	+				-0.4
1,246,006	+				+0.7
1,246,006	+				-0.8
1,246,006	+				+0.3
1,246,007	-				-2.1
1,246,043	+				+0.2
1,246,047	+				+0.5
1,246,048	-				-0.1
1,246,060	+				-0.5
1,246,060	+				+0.9
1,246,061	-				-1.2
1,246,064	+				+0.5
1,246,075	+		Echvi_1084	0.10	+0.6
1,246,075	+		Echvi_1084	0.10	+0.1
1,246,083	+		Echvi_1084	0.12	+0.3
1,246,084	-		Echvi_1084	0.12	-0.6
1,246,090	+		Echvi_1084	0.13	+1.1
1,246,107	-		Echvi_1084	0.15	+0.3
1,246,113	-		Echvi_1084	0.16	+0.3
1,246,141	+		Echvi_1084	0.20	+0.3
1,246,142	-		Echvi_1084	0.20	-0.1
1,246,142	-		Echvi_1084	0.20	-0.7
1,246,147	+		Echvi_1084	0.21	-0.2
1,246,148	-		Echvi_1084	0.21	+0.3
1,246,148	-		Echvi_1084	0.21	-0.5
1,246,157	+		Echvi_1084	0.23	+0.6
1,246,157	+		Echvi_1084	0.23	+2.0
1,246,157	+		Echvi_1084	0.23	+0.4
1,246,157	+		Echvi_1084	0.23	+0.9
1,246,161	+		Echvi_1084	0.23	+0.6
1,246,161	+		Echvi_1084	0.23	-1.2
1,246,161	+		Echvi_1084	0.23	+0.2
1,246,161	+		Echvi_1084	0.23	-0.4
1,246,162	-		Echvi_1084	0.23	+0.4
1,246,162	-		Echvi_1084	0.23	-0.3
1,246,162	-		Echvi_1084	0.23	-0.3
1,246,174	+		Echvi_1084	0.25	-1.7
1,246,211	+		Echvi_1084	0.31	+0.1
1,246,211	+		Echvi_1084	0.31	-0.1
1,246,211	+		Echvi_1084	0.31	+0.6
1,246,211	+		Echvi_1084	0.31	+0.5
1,246,212	-		Echvi_1084	0.31	-0.2
1,246,273	-		Echvi_1084	0.40	+1.0
1,246,298	-		Echvi_1084	0.44	+0.5
1,246,315	-		Echvi_1084	0.46	+0.0
1,246,343	-		Echvi_1084	0.50	-0.9
1,246,355	-		Echvi_1084	0.52	+0.7
1,246,387	-		Echvi_1084	0.57	+0.3
1,246,462	+		Echvi_1084	0.68	+0.0
1,246,463	-		Echvi_1084	0.68	+0.6
1,246,463	-		Echvi_1084	0.68	-1.4
1,246,552	+		Echvi_1084	0.81	-0.2
1,246,553	-		Echvi_1084	0.82	+0.4
1,246,553	-		Echvi_1084	0.82	+1.1
1,246,572	-		Echvi_1084	0.84	+1.1
1,246,572	-		Echvi_1084	0.84	-0.6
1,246,572	-		Echvi_1084	0.84	+0.4
1,246,653	-				-0.5
1,246,706	+				+1.1
1,246,706	+				-1.1
1,246,707	-				+0.5
1,246,707	-				+0.6
1,246,707	-				-1.3
1,246,707	-				-1.0
1,246,726	-				-1.1
1,246,815	-				-1.0
1,246,815	-				+1.7
1,246,815	-				-0.6
1,246,815	-				-0.6
1,246,835	+				-0.1
1,246,836	-				+0.3
1,246,867	+				+0.6
1,246,867	+				-0.8
1,246,962	-		Echvi_1085	0.35	+0.0
1,246,962	-		Echvi_1085	0.35	-1.8
1,246,983	+		Echvi_1085	0.41	-1.4
1,246,983	+		Echvi_1085	0.41	-1.5
1,246,990	+		Echvi_1085	0.43	-1.5
1,246,990	+		Echvi_1085	0.43	-0.5
1,246,990	+		Echvi_1085	0.43	-0.3
1,246,990	+		Echvi_1085	0.43	-0.3
1,246,990	+		Echvi_1085	0.43	+0.8
1,246,990	+		Echvi_1085	0.43	-0.5
1,246,991	-		Echvi_1085	0.43	-1.1
1,246,991	-		Echvi_1085	0.43	-0.2
1,246,991	-		Echvi_1085	0.43	+0.1
1,246,993	-		Echvi_1085	0.43	-0.5
1,246,993	-		Echvi_1085	0.43	-1.3
1,246,993	-		Echvi_1085	0.43	+0.0
1,247,047	-		Echvi_1085	0.58	+0.3
1,247,047	-		Echvi_1085	0.58	+0.2
1,247,047	-		Echvi_1085	0.58	-0.3
1,247,080	+		Echvi_1085	0.67	-0.2
1,247,146	-		Echvi_1085	0.85	-0.6
1,247,185	-				-0.6
1,247,185	-				+0.1
1,247,186	+				+1.0
1,247,186	+				+1.0
1,247,187	-				+0.6
1,247,187	-				+0.0
1,247,187	-				+0.1
1,247,225	-				+0.5
1,247,252	+		Echvi_1086	0.16	+2.7
1,247,252	+		Echvi_1086	0.16	-0.2
1,247,252	+		Echvi_1086	0.16	+0.4
1,247,253	-		Echvi_1086	0.16	-0.9
1,247,284	-		Echvi_1086	0.25	-1.4
1,247,284	-		Echvi_1086	0.25	+0.2
1,247,284	-		Echvi_1086	0.25	-0.9
1,247,321	+		Echvi_1086	0.37	-1.3
1,247,321	+		Echvi_1086	0.37	+0.2
1,247,322	-		Echvi_1086	0.37	+0.5
1,247,322	-		Echvi_1086	0.37	+0.2
1,247,322	-		Echvi_1086	0.37	+1.1
1,247,322	-		Echvi_1086	0.37	-0.1
1,247,322	-		Echvi_1086	0.37	-0.3
1,247,322	-		Echvi_1086	0.37	-0.7
1,247,328	+		Echvi_1086	0.39	+0.4
1,247,329	-		Echvi_1086	0.39	-0.2
1,247,340	-		Echvi_1086	0.43	-0.3
1,247,357	-		Echvi_1086	0.48	-1.2
1,247,357	-		Echvi_1086	0.48	+1.4
1,247,383	+		Echvi_1086	0.56	-1.8
1,247,385	+		Echvi_1086	0.56	+0.4
1,247,386	-		Echvi_1086	0.57	-1.8
1,247,459	+		Echvi_1086	0.79	-0.1
1,247,459	+		Echvi_1086	0.79	-0.2
1,247,563	-				+1.9
1,247,677	+				+0.5
1,247,728	-				-0.5
1,247,729	+				-1.3
1,247,729	+				-0.3
1,247,750	+				-0.4
1,247,751	-				-0.2
1,247,756	-				-0.0
1,247,787	-				-0.4
1,247,787	-				+0.7
1,247,787	-				-1.4
1,247,810	+				-1.2
1,247,878	+				-0.2
1,247,882	+				+0.5
1,247,899	+				+2.7
1,247,899	+				+0.0
1,247,951	-				+1.1
1,247,951	-				+0.2
1,247,967	+				+0.1
1,247,967	+				+0.1
1,248,010	+				-0.2
1,248,011	-				+1.0
1,248,011	-				-0.5
1,248,030	-				+0.1
1,248,034	-				+0.3
1,248,034	-				+0.9
1,248,159	+				-0.2
1,248,160	-				-1.0
1,248,160	-				+1.7
1,248,163	+				+0.2
1,248,163	+				-0.5
1,248,163	+				+0.8
1,248,163	+				+1.1
1,248,163	+				-0.5
1,248,163	+				-1.3
1,248,163	+				+0.9
1,248,164	-				+0.1
1,248,182	+				-0.5
1,248,186	+				+0.8
1,248,187	-				+0.6
1,248,190	+				+2.3
1,248,190	+				-1.8
1,248,190	+				-1.1
1,248,190	+				+0.1
1,248,191	-				-0.2
1,248,191	-				+0.3
1,248,192	+				+1.0
1,248,193	-				-1.1
1,248,196	-				+0.2