Experiment: m.b. Carbenicillin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0590 and Echvi_0591 are separated by 6 nucleotides Echvi_0591 and Echvi_0592 are separated by 75 nucleotides Echvi_0592 and Echvi_0593 are separated by 91 nucleotides Echvi_0593 and Echvi_0594 are separated by 41 nucleotides
Echvi_0590: Echvi_0590 - DnaJ-class molecular chaperone with C-terminal Zn finger domain, at 668,095 to 669,210
_0590
Echvi_0591: Echvi_0591 - Molecular chaperone GrpE (heat shock protein), at 669,217 to 669,837
_0591
Echvi_0592: Echvi_0592 - Obg family GTPase CgtA, at 669,913 to 670,905
_0592
Echvi_0593: Echvi_0593 - Adenylate kinase and related kinases, at 670,997 to 671,569
_0593
Echvi_0594: Echvi_0594 - hypoxanthine phosphoribosyltransferase, at 671,611 to 672,192
_0594
Position (kb) 669
670
671 Strain fitness (log2 ratio) -1
0
1
2
3 at 669.211 kb on - strand at 669.214 kb on - strand at 669.214 kb on - strand at 669.219 kb on - strand at 669.770 kb on - strand, within Echvi_0591 at 669.770 kb on - strand, within Echvi_0591 at 669.770 kb on - strand, within Echvi_0591 at 669.805 kb on - strand at 669.805 kb on - strand at 669.805 kb on - strand at 669.823 kb on - strand at 669.838 kb on - strand at 669.838 kb on - strand at 669.838 kb on - strand at 670.909 kb on - strand at 670.909 kb on - strand at 670.909 kb on - strand at 670.909 kb on - strand at 670.912 kb on - strand at 670.912 kb on - strand at 670.919 kb on - strand at 670.932 kb on - strand at 670.981 kb on - strand at 670.999 kb on - strand at 671.001 kb on + strand at 671.586 kb on - strand at 671.599 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.625 kb on - strand at 671.627 kb on - strand at 671.627 kb on - strand at 671.627 kb on - strand at 671.627 kb on - strand at 671.627 kb on - strand at 671.709 kb on - strand, within Echvi_0594 at 671.732 kb on - strand, within Echvi_0594 at 671.843 kb on - strand, within Echvi_0594 at 671.849 kb on - strand, within Echvi_0594 at 671.849 kb on - strand, within Echvi_0594 at 671.849 kb on - strand, within Echvi_0594 at 671.854 kb on - strand, within Echvi_0594 at 671.854 kb on - strand, within Echvi_0594
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.1 mg/ml remove 669,211 - +0.4 669,214 - -0.4 669,214 - -0.6 669,219 - -0.6 669,770 - Echvi_0591 0.89 +0.6 669,770 - Echvi_0591 0.89 -0.9 669,770 - Echvi_0591 0.89 -0.1 669,805 - +0.8 669,805 - +2.6 669,805 - -1.2 669,823 - +0.6 669,838 - -0.9 669,838 - -0.4 669,838 - +2.4 670,909 - +0.2 670,909 - -1.0 670,909 - -0.4 670,909 - +0.3 670,912 - +1.6 670,912 - +0.6 670,919 - -0.7 670,932 - -0.6 670,981 - -0.0 670,999 - -0.1 671,001 + +0.4 671,586 - +0.6 671,599 - +0.3 671,625 - +1.0 671,625 - +0.8 671,625 - +0.8 671,625 - +1.6 671,625 - +1.0 671,625 - +1.6 671,627 - +0.7 671,627 - +3.2 671,627 - +0.9 671,627 - +2.3 671,627 - +1.3 671,709 - Echvi_0594 0.17 +0.2 671,732 - Echvi_0594 0.21 +2.1 671,843 - Echvi_0594 0.40 -0.2 671,849 - Echvi_0594 0.41 +2.0 671,849 - Echvi_0594 0.41 -0.9 671,849 - Echvi_0594 0.41 +0.6 671,854 - Echvi_0594 0.42 +0.8 671,854 - Echvi_0594 0.42 +2.3
Or see this region's nucleotide sequence