Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0108

Experiment: m.b. Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Carbenicillin 0.1 mg/ml
102,361	+		Echvi_0105	0.77	-0.8
102,362	-		Echvi_0105	0.77	+0.1
102,455	+				-0.2
102,455	+				-1.0
102,456	-				+0.1
102,456	-				+0.1
102,458	-				+0.2
102,476	-				+0.2
102,501	-				+0.1
102,522	+				-0.6
102,524	+				-0.0
102,601	+		Echvi_0106	0.17	-0.5
102,688	-		Echvi_0106	0.36	+0.0
102,688	-		Echvi_0106	0.36	-1.7
102,688	-		Echvi_0106	0.36	+0.3
102,691	+		Echvi_0106	0.37	-0.2
102,691	+		Echvi_0106	0.37	+1.0
102,692	-		Echvi_0106	0.37	-0.2
102,919	+		Echvi_0106	0.86	-0.9
102,920	-		Echvi_0106	0.86	+0.4
102,920	-		Echvi_0106	0.86	+1.2
102,920	-		Echvi_0106	0.86	-2.0
102,921	+		Echvi_0106	0.87	+0.7
102,921	+		Echvi_0106	0.87	-0.8
102,952	+				+0.9
102,953	-				+3.1
102,961	+				+0.2
102,984	+				+0.3
102,984	+				+0.6
102,984	+				+0.7
102,985	-				+0.5
103,357	-				+1.6
103,491	-		Echvi_0108	0.15	-0.2
103,684	-		Echvi_0108	0.37	+0.0
103,833	+		Echvi_0108	0.54	+1.7
103,834	-		Echvi_0108	0.54	+1.1
103,986	-		Echvi_0108	0.71	+0.2
104,004	-		Echvi_0108	0.73	+0.6
104,255	+				+0.3
104,256	-				+0.4
105,144	-				-0.1
105,161	-				+0.1
105,161	-				+2.5
105,162	+				-0.7
105,162	+				-1.3
105,163	-				-0.6
105,163	-				-0.1
105,163	-				+0.3
105,198	-				-0.8
105,200	-				-0.3