Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3931

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
4,705,876	+		Echvi_3930	0.50	-0.8
4,705,961	-		Echvi_3930	0.55	-0.7
4,705,993	+		Echvi_3930	0.58	-0.3
4,705,993	+		Echvi_3930	0.58	+3.0
4,706,041	+		Echvi_3930	0.61	-0.0
4,706,042	-		Echvi_3930	0.61	-0.6
4,706,059	+		Echvi_3930	0.62	+0.5
4,706,059	+		Echvi_3930	0.62	+0.4
4,706,060	-		Echvi_3930	0.62	-1.6
4,706,060	-		Echvi_3930	0.62	-0.4
4,706,060	-		Echvi_3930	0.62	-1.1
4,706,060	-		Echvi_3930	0.62	-0.2
4,706,060	-		Echvi_3930	0.62	-0.5
4,706,060	-		Echvi_3930	0.62	-1.3
4,706,062	+		Echvi_3930	0.62	+0.1
4,706,062	+		Echvi_3930	0.62	-1.1
4,706,062	+		Echvi_3930	0.62	-0.7
4,706,062	+		Echvi_3930	0.62	+0.4
4,706,062	+		Echvi_3930	0.62	+0.4
4,706,062	+		Echvi_3930	0.62	-1.4
4,706,062	+		Echvi_3930	0.62	+2.5
4,706,063	-		Echvi_3930	0.62	+1.5
4,706,063	-		Echvi_3930	0.62	+0.0
4,706,102	+		Echvi_3930	0.65	+0.1
4,706,227	+		Echvi_3930	0.73	+0.4
4,706,228	-		Echvi_3930	0.74	-0.2
4,706,228	-		Echvi_3930	0.74	+1.2
4,706,308	+		Echvi_3930	0.79	+0.0
4,706,308	+		Echvi_3930	0.79	+0.2
4,706,311	+		Echvi_3930	0.79	-0.5
4,706,330	-		Echvi_3930	0.81	+1.6
4,706,352	+		Echvi_3930	0.82	-1.2
4,706,352	+		Echvi_3930	0.82	+2.6
4,706,352	+		Echvi_3930	0.82	-0.2
4,706,425	+		Echvi_3930	0.87	-1.3
4,706,425	+		Echvi_3930	0.87	+1.0
4,706,425	+		Echvi_3930	0.87	-0.2
4,706,548	+				+0.9
4,706,577	+				+0.3
4,706,577	+				+0.4
4,706,629	+				+0.5
4,706,632	+				-0.3
4,706,642	+				-1.1
4,706,679	+				+0.0
4,706,679	+				-1.0
4,706,680	-				-1.4
4,706,907	-				-0.5
4,707,056	+		Echvi_3931	0.18	+0.8
4,707,056	+		Echvi_3931	0.18	+0.9
4,707,056	+		Echvi_3931	0.18	-0.3
4,707,056	+		Echvi_3931	0.18	-0.7
4,707,057	-		Echvi_3931	0.18	+0.8
4,707,057	-		Echvi_3931	0.18	-1.4
4,707,064	-		Echvi_3931	0.19	+0.7
4,707,289	-		Echvi_3931	0.39	+0.6
4,707,368	+		Echvi_3931	0.46	-0.0
4,707,369	-		Echvi_3931	0.46	+1.3
4,707,397	+		Echvi_3931	0.49	-0.4
4,707,459	+		Echvi_3931	0.54	+0.8
4,707,506	-		Echvi_3931	0.58	+2.2
4,707,591	+		Echvi_3931	0.66	-0.7
4,707,591	+		Echvi_3931	0.66	+1.6
4,707,592	-		Echvi_3931	0.66	-0.5
4,707,681	+		Echvi_3931	0.74	-1.6
4,707,681	+		Echvi_3931	0.74	+0.2
4,707,682	-		Echvi_3931	0.74	+1.0
4,707,699	+		Echvi_3931	0.75	-0.8
4,707,699	+		Echvi_3931	0.75	+0.6
4,707,700	-		Echvi_3931	0.76	+0.1
4,707,751	+		Echvi_3931	0.80	+1.1
4,707,757	+		Echvi_3931	0.81	+0.8
4,707,763	+		Echvi_3931	0.81	+1.1
4,707,763	+		Echvi_3931	0.81	-0.4
4,707,764	-		Echvi_3931	0.81	-0.0
4,707,777	+		Echvi_3931	0.82	+1.0
4,707,777	+		Echvi_3931	0.82	+0.2
4,707,790	-		Echvi_3931	0.84	-1.6
4,707,790	-		Echvi_3931	0.84	+0.4
4,707,896	+				-0.4
4,707,942	+				-1.1
4,707,943	-				+0.3
4,707,955	-				-2.4
4,707,974	+				+0.5
4,707,984	+				+1.2
4,707,985	-				+0.0
4,707,985	-				-0.4
4,707,985	-				-0.4
4,708,016	+				+0.9
4,708,052	+				-0.6
4,708,103	+				-1.4
4,708,110	-		Echvi_3932	0.10	+0.3
4,708,119	+		Echvi_3932	0.11	+0.1
4,708,119	+		Echvi_3932	0.11	-1.4
4,708,119	+		Echvi_3932	0.11	+1.3
4,708,120	-		Echvi_3932	0.11	+0.9
4,708,120	-		Echvi_3932	0.11	+1.2
4,708,129	-		Echvi_3932	0.12	+0.1
4,708,162	+		Echvi_3932	0.14	+0.5
4,708,162	+		Echvi_3932	0.14	+0.3
4,708,163	-		Echvi_3932	0.15	-0.3
4,708,163	-		Echvi_3932	0.15	+0.3
4,708,189	+		Echvi_3932	0.17	+0.3
4,708,190	-		Echvi_3932	0.17	-1.1
4,708,210	+		Echvi_3932	0.18	+2.2
4,708,253	+		Echvi_3932	0.22	+0.9
4,708,254	-		Echvi_3932	0.22	-0.0
4,708,298	-		Echvi_3932	0.25	-0.1
4,708,321	+		Echvi_3932	0.27	-0.1
4,708,332	+		Echvi_3932	0.28	-0.3
4,708,395	-		Echvi_3932	0.33	-0.4
4,708,411	-		Echvi_3932	0.35	-0.7
4,708,413	+		Echvi_3932	0.35	+0.6
4,708,427	+		Echvi_3932	0.36	+0.1
4,708,428	-		Echvi_3932	0.36	+0.8
4,708,441	+		Echvi_3932	0.37	+0.7
4,708,441	+		Echvi_3932	0.37	-0.5
4,708,479	+		Echvi_3932	0.40	-0.7
4,708,480	-		Echvi_3932	0.40	+0.9
4,708,531	+		Echvi_3932	0.44	-1.2
4,708,531	+		Echvi_3932	0.44	-0.6
4,708,532	-		Echvi_3932	0.44	-0.0
4,708,585	+		Echvi_3932	0.49	-1.6
4,708,585	+		Echvi_3932	0.49	-0.9
4,708,586	-		Echvi_3932	0.49	-0.4
4,708,595	+		Echvi_3932	0.49	+0.6
4,708,614	+		Echvi_3932	0.51	-1.4
4,708,615	-		Echvi_3932	0.51	-0.1
4,708,626	-		Echvi_3932	0.52	+0.0
4,708,660	+		Echvi_3932	0.55	-0.4
4,708,774	-		Echvi_3932	0.64	+0.5
4,708,811	+		Echvi_3932	0.67	+0.8
4,708,811	+		Echvi_3932	0.67	-0.3
4,708,812	-		Echvi_3932	0.67	-0.1
4,708,812	-		Echvi_3932	0.67	+0.6
4,708,812	-		Echvi_3932	0.67	-1.0
4,708,852	-		Echvi_3932	0.70	-0.2
4,708,904	+		Echvi_3932	0.74	-1.4
4,708,905	-		Echvi_3932	0.74	+0.1
4,708,912	+		Echvi_3932	0.75	+1.1
4,708,912	+		Echvi_3932	0.75	-1.1
4,708,912	+		Echvi_3932	0.75	-1.1
4,708,912	+		Echvi_3932	0.75	+0.7
4,708,912	+		Echvi_3932	0.75	-0.2
4,708,912	+		Echvi_3932	0.75	-1.4
4,708,912	+		Echvi_3932	0.75	-0.2
4,708,912	+		Echvi_3932	0.75	-2.1
4,708,913	-		Echvi_3932	0.75	-0.0