Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3928

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
4,702,663	+				-0.1
4,702,663	+				+2.9
4,702,689	+				-2.9
4,702,690	-				-1.1
4,702,792	-		Echvi_3927	0.15	-0.9
4,702,896	+		Echvi_3927	0.31	-2.1
4,702,896	+		Echvi_3927	0.31	+0.6
4,702,898	+		Echvi_3927	0.32	+0.5
4,702,899	-		Echvi_3927	0.32	-0.6
4,702,899	-		Echvi_3927	0.32	-1.0
4,702,917	-		Echvi_3927	0.35	-0.2
4,702,919	-		Echvi_3927	0.35	-0.3
4,702,934	+		Echvi_3927	0.37	-0.1
4,702,935	-		Echvi_3927	0.38	-0.8
4,702,935	-		Echvi_3927	0.38	-0.8
4,702,949	+		Echvi_3927	0.40	-0.3
4,702,950	-		Echvi_3927	0.40	-1.3
4,702,950	-		Echvi_3927	0.40	+0.1
4,702,952	+		Echvi_3927	0.40	+1.0
4,703,122	-		Echvi_3927	0.67	-0.9
4,703,122	-		Echvi_3927	0.67	+0.5
4,703,125	+		Echvi_3927	0.67	-0.4
4,703,302	+				+0.8
4,703,321	-				+0.1
4,703,329	+				+0.6
4,703,329	+				+1.2
4,703,330	-				-0.2
4,703,330	-				-1.0
4,703,363	-				+0.8
4,703,403	+				-1.4
4,703,403	+				-0.1
4,703,403	+				+0.7
4,703,438	+				-1.3
4,703,439	-				-0.1
4,703,458	+				+1.2
4,703,458	+				-0.1
4,703,459	-				+0.0
4,703,461	+				-0.5
4,703,461	+				+0.1
4,703,461	+				-0.5
4,703,614	+				-0.7
4,703,615	-				-2.1
4,703,615	-				+0.8
4,703,627	+				-0.7
4,703,639	-				+0.0
4,703,762	-		Echvi_3928	0.18	-0.0
4,703,776	+		Echvi_3928	0.19	+0.5
4,703,972	+		Echvi_3928	0.45	-0.3
4,703,972	+		Echvi_3928	0.45	-1.5
4,704,042	+		Echvi_3928	0.55	-0.2
4,704,069	+		Echvi_3928	0.58	+0.1
4,704,069	+		Echvi_3928	0.58	+2.0
4,704,069	+		Echvi_3928	0.58	-0.5
4,704,069	+		Echvi_3928	0.58	-1.0
4,704,070	-		Echvi_3928	0.58	-0.9
4,704,070	-		Echvi_3928	0.58	-0.2
4,704,292	+		Echvi_3928	0.87	-0.4
4,704,340	-				-0.2
4,704,340	-				+1.2
4,704,379	+				+0.2
4,704,380	-				-0.6
4,704,384	+				+0.9
4,704,454	+				-1.1
4,704,455	-				+0.4
4,704,455	-				-0.6
4,704,473	+				+0.4
4,704,474	-				-0.8
4,704,477	-				-2.0
4,704,494	-				-0.6
4,704,494	-				-0.6
4,704,554	+		Echvi_3929	0.12	-0.1
4,704,557	+		Echvi_3929	0.13	-0.1
4,704,558	-		Echvi_3929	0.13	-0.6
4,704,568	+		Echvi_3929	0.15	+1.3
4,704,568	+		Echvi_3929	0.15	+0.6
4,704,569	-		Echvi_3929	0.15	-0.4
4,704,615	-		Echvi_3929	0.23	-0.7
4,704,615	-		Echvi_3929	0.23	+0.9
4,704,666	-		Echvi_3929	0.32	-0.2
4,704,667	+		Echvi_3929	0.32	+0.8
4,704,667	+		Echvi_3929	0.32	+2.4
4,704,667	+		Echvi_3929	0.32	+0.1
4,704,667	+		Echvi_3929	0.32	-0.1
4,704,667	+		Echvi_3929	0.32	+0.7
4,704,667	+		Echvi_3929	0.32	-0.5
4,704,667	+		Echvi_3929	0.32	+1.0
4,704,668	-		Echvi_3929	0.32	+0.8
4,704,668	-		Echvi_3929	0.32	-0.7
4,704,668	-		Echvi_3929	0.32	+1.1
4,704,668	-		Echvi_3929	0.32	-0.6
4,704,668	-		Echvi_3929	0.32	+0.1
4,704,893	+		Echvi_3929	0.71	-0.3
4,704,897	+		Echvi_3929	0.71	-0.5
4,704,901	+		Echvi_3929	0.72	-0.8
4,704,901	+		Echvi_3929	0.72	+0.6
4,704,974	+		Echvi_3929	0.85	-0.9
4,704,975	-		Echvi_3929	0.85	+1.6
4,704,976	+		Echvi_3929	0.85	+1.9
4,704,976	+		Echvi_3929	0.85	+0.4
4,704,985	-		Echvi_3929	0.86	+1.3
4,705,035	+				+1.1
4,705,036	-				+0.7
4,705,083	+				+1.8
4,705,084	-				+0.3
4,705,087	+				-0.2
4,705,088	-				+0.3
4,705,088	-				-0.8
4,705,090	+				-0.6
4,705,090	+				+0.2
4,705,091	-				+0.9
4,705,113	-				-0.1
4,705,135	-				-0.0
4,705,156	-				+0.3
4,705,359	+		Echvi_3930	0.14	+0.4
4,705,359	+		Echvi_3930	0.14	+0.3
4,705,359	+		Echvi_3930	0.14	+0.5
4,705,359	+		Echvi_3930	0.14	+0.3
4,705,359	+		Echvi_3930	0.14	-1.7
4,705,359	+		Echvi_3930	0.14	+0.4
4,705,359	+		Echvi_3930	0.14	-0.9
4,705,359	+		Echvi_3930	0.14	+0.2
4,705,359	+		Echvi_3930	0.14	+0.8
4,705,360	-		Echvi_3930	0.14	-1.2
4,705,360	-		Echvi_3930	0.14	-1.2
4,705,360	-		Echvi_3930	0.14	+0.6
4,705,360	-		Echvi_3930	0.14	+0.9
4,705,360	-		Echvi_3930	0.14	-0.7
4,705,360	-		Echvi_3930	0.14	+0.8
4,705,360	-		Echvi_3930	0.14	+1.0
4,705,360	-		Echvi_3930	0.14	-0.4
4,705,360	-		Echvi_3930	0.14	-0.4