Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3879

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
4,633,962	+				-2.9
4,633,983	+				-0.3
4,633,983	+				-1.2
4,633,983	+				-0.3
4,633,984	-				-0.2
4,634,073	-				+0.1
4,634,104	+				+0.5
4,634,104	+				-0.8
4,634,108	-				-1.4
4,634,142	-				-1.0
4,634,156	-				-0.7
4,634,159	+				-0.3
4,634,159	+				-0.6
4,634,168	+				+1.8
4,634,217	-				-0.0
4,634,463	+		Echvi_3878	0.47	-2.5
4,634,551	-		Echvi_3878	0.61	-0.0
4,634,675	-		Echvi_3878	0.80	-1.0
4,634,800	-				+0.1
4,634,817	+				-1.2
4,634,818	-				+0.2
4,634,821	+				+0.2
4,634,871	+				-2.3
4,634,955	+				+0.7
4,634,956	-				-0.1
4,634,984	+				-1.2
4,634,984	+				+0.2
4,634,984	+				+0.1
4,634,985	-				-0.3
4,635,001	+				+0.3
4,635,067	+				-1.8
4,635,067	+				-0.1
4,635,067	+				-1.3
4,635,067	+				+0.4
4,635,067	+				-2.7
4,635,068	-				+0.1
4,635,068	-				+1.3
4,635,068	-				+1.7
4,635,077	+				-0.9
4,635,077	+				+0.9
4,635,078	-				-0.7
4,635,099	+				-0.8
4,635,141	-		Echvi_3879	0.12	+0.3
4,635,167	-		Echvi_3879	0.14	-1.3
4,635,213	-		Echvi_3879	0.17	-2.7
4,635,219	+		Echvi_3879	0.17	-0.1
4,635,219	+		Echvi_3879	0.17	-0.6
4,635,220	-		Echvi_3879	0.17	-0.3
4,635,298	+		Echvi_3879	0.22	-1.4
4,635,316	+		Echvi_3879	0.23	-0.9
4,635,316	+		Echvi_3879	0.23	+0.4
4,635,316	+		Echvi_3879	0.23	-1.8
4,635,316	+		Echvi_3879	0.23	+0.4
4,635,319	+		Echvi_3879	0.23	+0.5
4,635,319	+		Echvi_3879	0.23	+0.6
4,635,321	+		Echvi_3879	0.23	-1.1
4,635,322	-		Echvi_3879	0.23	-1.7
4,635,414	-		Echvi_3879	0.29	-0.0
4,635,425	+		Echvi_3879	0.30	-0.3
4,635,434	+		Echvi_3879	0.30	-1.3
4,635,434	+		Echvi_3879	0.30	-2.9
4,635,474	-		Echvi_3879	0.33	-0.9
4,635,491	+		Echvi_3879	0.34	+0.7
4,635,491	+		Echvi_3879	0.34	-2.6
4,635,539	+		Echvi_3879	0.37	-1.5
4,635,540	-		Echvi_3879	0.37	-0.4
4,635,540	-		Echvi_3879	0.37	-2.8
4,635,689	+		Echvi_3879	0.46	+0.3
4,635,689	+		Echvi_3879	0.46	-0.1
4,635,689	+		Echvi_3879	0.46	-1.7
4,635,692	+		Echvi_3879	0.46	-1.0
4,635,692	+		Echvi_3879	0.46	-1.6
4,635,692	+		Echvi_3879	0.46	-2.0
4,635,692	+		Echvi_3879	0.46	-0.6
4,635,693	-		Echvi_3879	0.46	-1.1
4,635,693	-		Echvi_3879	0.46	-0.6
4,635,693	-		Echvi_3879	0.46	-1.5
4,635,702	-		Echvi_3879	0.46	-1.4
4,635,715	-		Echvi_3879	0.47	-0.8
4,635,720	+		Echvi_3879	0.48	+0.1
4,635,721	-		Echvi_3879	0.48	-1.0
4,635,773	+		Echvi_3879	0.51	-0.7
4,635,773	+		Echvi_3879	0.51	-1.3
4,635,773	+		Echvi_3879	0.51	-0.9
4,635,774	-		Echvi_3879	0.51	+0.6
4,635,777	+		Echvi_3879	0.51	-2.0
4,635,777	+		Echvi_3879	0.51	-1.1
4,635,777	+		Echvi_3879	0.51	+0.5
4,635,778	-		Echvi_3879	0.51	-0.2
4,635,778	-		Echvi_3879	0.51	-0.2
4,635,778	-		Echvi_3879	0.51	-1.0
4,635,778	-		Echvi_3879	0.51	+0.6
4,635,780	+		Echvi_3879	0.51	-0.3
4,635,781	-		Echvi_3879	0.51	+0.8
4,635,791	+		Echvi_3879	0.52	+0.3
4,635,791	+		Echvi_3879	0.52	-0.8
4,635,808	-		Echvi_3879	0.53	-1.1
4,635,812	+		Echvi_3879	0.53	-0.7
4,635,878	+		Echvi_3879	0.57	+1.2
4,635,912	+		Echvi_3879	0.59	-0.3
4,635,912	+		Echvi_3879	0.59	-1.0
4,635,913	-		Echvi_3879	0.59	-0.1
4,635,920	-		Echvi_3879	0.60	-1.4
4,635,957	-		Echvi_3879	0.62	+1.8
4,635,984	+		Echvi_3879	0.64	-0.4
4,635,984	+		Echvi_3879	0.64	+0.5
4,635,985	-		Echvi_3879	0.64	-0.7
4,635,985	-		Echvi_3879	0.64	+0.6
4,636,017	+		Echvi_3879	0.66	+0.3
4,636,017	+		Echvi_3879	0.66	+0.6
4,636,059	-		Echvi_3879	0.68	-0.5
4,636,062	+		Echvi_3879	0.68	-0.2
4,636,149	+		Echvi_3879	0.74	+1.6
4,636,150	-		Echvi_3879	0.74	-0.2
4,636,194	+		Echvi_3879	0.76	-1.0
4,636,195	-		Echvi_3879	0.76	-0.6
4,636,247	-		Echvi_3879	0.80	+0.9
4,636,305	+		Echvi_3879	0.83	+1.3
4,636,305	+		Echvi_3879	0.83	+2.6
4,636,306	-		Echvi_3879	0.83	-0.5
4,636,359	+		Echvi_3879	0.86	+0.2
4,636,359	+		Echvi_3879	0.86	+1.6
4,636,360	-		Echvi_3879	0.86	-0.5
4,636,398	+		Echvi_3879	0.89	+0.4
4,636,398	+		Echvi_3879	0.89	-0.6
4,636,398	+		Echvi_3879	0.89	-0.7
4,636,398	+		Echvi_3879	0.89	-1.2
4,636,398	+		Echvi_3879	0.89	-1.0
4,636,398	+		Echvi_3879	0.89	-0.5
4,636,398	+		Echvi_3879	0.89	-1.9
4,636,398	+		Echvi_3879	0.89	-1.1
4,636,398	+		Echvi_3879	0.89	-0.7
4,636,398	+		Echvi_3879	0.89	-3.2
4,636,398	+		Echvi_3879	0.89	-1.0
4,636,398	+		Echvi_3879	0.89	-3.2
4,636,399	-		Echvi_3879	0.89	+0.0
4,636,399	-		Echvi_3879	0.89	+1.0
4,636,399	-		Echvi_3879	0.89	-0.7
4,636,399	-		Echvi_3879	0.89	-0.7
4,636,453	-				-1.8
4,636,464	+				-2.9
4,636,542	-				-3.3
4,636,542	-				+0.3
4,636,550	+				+0.0
4,636,551	-				+2.5
4,636,551	-				+1.0
4,636,695	-				+2.6
4,636,699	-				+3.2
4,636,717	+				-2.1
4,636,765	+		Echvi_3880	0.18	+0.5
4,636,937	+		Echvi_3880	0.82	+0.6
4,636,952	+		Echvi_3880	0.87	-0.8
4,636,952	+		Echvi_3880	0.87	-0.6
4,636,952	+		Echvi_3880	0.87	-0.2
4,636,953	-		Echvi_3880	0.88	+1.5
4,636,953	-		Echvi_3880	0.88	+1.2
4,636,953	-		Echvi_3880	0.88	+2.3
4,636,953	-		Echvi_3880	0.88	+3.0
4,636,958	+		Echvi_3880	0.90	+0.4
4,636,965	-				+0.1
4,636,980	+				-0.6
4,636,981	-				+0.7
4,636,987	-				+0.1
4,636,992	+				+0.3
4,636,993	-				+1.6
4,637,013	-				+2.4
4,637,013	-				+1.6
4,637,022	-				+1.0
4,637,060	+				+0.3
4,637,060	+				-0.5
4,637,129	-				-0.6
4,637,212	-				-0.9
4,637,312	+				-1.1
4,637,337	+				-0.4
4,637,338	-				+0.4
4,637,389	-				+0.7
4,637,408	+				-0.2
4,637,487	-				+0.8