Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3824

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
4,568,827	-				+0.6
4,568,827	-				-0.4
4,568,835	+				-1.1
4,568,835	+				-2.1
4,568,836	-				-1.1
4,568,907	+				+1.6
4,568,908	-				-0.3
4,568,908	-				-0.1
4,568,908	-				-1.1
4,569,015	+				-0.3
4,569,016	-				-1.6
4,569,018	+				+0.0
4,569,018	+				-0.4
4,569,039	+				+0.1
4,569,111	-				-0.3
4,569,239	-				-0.8
4,569,255	+				+0.6
4,569,260	+				-1.1
4,569,260	+				+1.2
4,569,330	-				-1.0
4,569,365	+		Echvi_3824	0.16	-0.3
4,569,428	-		Echvi_3824	0.49	+2.2
4,569,428	-		Echvi_3824	0.49	+1.6
4,569,430	-		Echvi_3824	0.51	+3.2
4,569,430	-		Echvi_3824	0.51	+1.6
4,569,430	-		Echvi_3824	0.51	-0.6
4,569,430	-		Echvi_3824	0.51	+0.0
4,569,430	-		Echvi_3824	0.51	+0.0
4,569,599	+				+0.2
4,569,599	+				-0.2
4,569,616	+				+0.6
4,569,616	+				-0.3
4,569,617	-				+0.4
4,569,622	-				+0.3
4,569,656	+				+1.2
4,569,656	+				+0.0
4,569,671	+				+0.3
4,569,766	+				+1.2
4,569,766	+				-1.0
4,569,812	+				+0.5
4,569,812	+				-0.3
4,569,818	-				+0.3
4,569,819	+				+0.7
4,569,877	-		Echvi_3825	0.12	-0.6
4,569,938	-		Echvi_3825	0.17	+1.1
4,570,034	-		Echvi_3825	0.25	-0.9
4,570,035	+		Echvi_3825	0.25	-1.3
4,570,047	+		Echvi_3825	0.26	-0.1
4,570,048	-		Echvi_3825	0.26	-1.0
4,570,069	-		Echvi_3825	0.27	+0.9
4,570,069	-		Echvi_3825	0.27	+1.0
4,570,116	+		Echvi_3825	0.31	+0.8
4,570,117	-		Echvi_3825	0.31	-0.4
4,570,117	-		Echvi_3825	0.31	-0.2
4,570,150	-		Echvi_3825	0.34	+1.0
4,570,153	+		Echvi_3825	0.34	-0.6
4,570,154	-		Echvi_3825	0.34	-1.4
4,570,183	-		Echvi_3825	0.37	-1.4
4,570,220	+		Echvi_3825	0.40	-1.6
4,570,228	-		Echvi_3825	0.40	-0.1
4,570,249	+		Echvi_3825	0.42	+0.1
4,570,304	+		Echvi_3825	0.46	-3.3
4,570,304	+		Echvi_3825	0.46	-1.5
4,570,304	+		Echvi_3825	0.46	-1.0
4,570,305	-		Echvi_3825	0.46	+0.0
4,570,357	+		Echvi_3825	0.51	+0.2
4,570,447	+		Echvi_3825	0.58	-1.3
4,570,448	-		Echvi_3825	0.58	-0.1
4,570,503	+		Echvi_3825	0.62	-0.3
4,570,503	+		Echvi_3825	0.62	-0.7