Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3453

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
4,082,965	+		Echvi_3452	0.74	-1.1
4,082,977	+		Echvi_3452	0.75	+0.8
4,083,046	+		Echvi_3452	0.78	+0.6
4,083,241	+		Echvi_3452	0.85	+0.0
4,083,241	+		Echvi_3452	0.85	+0.3
4,083,241	+		Echvi_3452	0.85	-1.5
4,083,241	+		Echvi_3452	0.85	-1.4
4,083,377	-				-0.3
4,083,382	-				-0.3
4,083,420	+				-1.0
4,083,420	+				+0.6
4,083,421	-				+0.2
4,083,421	-				+2.0
4,083,421	-				+0.4
4,083,427	-				+1.0
4,083,427	-				-1.9
4,083,433	+				+0.3
4,083,434	-				-0.3
4,083,445	+				+0.5
4,083,483	+				+0.7
4,083,505	+				+1.0
4,083,505	+				-0.0
4,083,506	-				+1.2
4,083,506	-				+1.3
4,083,506	-				+0.4
4,083,506	-				+1.1
4,083,506	-				-0.6
4,083,527	+				-0.4
4,083,528	-				+0.5
4,083,586	+				+0.6
4,083,587	-				-0.1
4,083,587	-				+0.1
4,083,587	-				+0.4
4,083,597	+				-0.9
4,083,597	+				-0.6
4,083,598	-				-1.1
4,083,598	-				+0.3
4,083,610	-				+1.6
4,083,655	-				+0.2
4,083,704	-				-0.0
4,083,706	+				-0.2
4,083,706	+				+1.6
4,083,706	+				+0.7
4,083,706	+				-0.2
4,083,706	+				-1.5
4,083,706	+				-2.4
4,083,706	+				+0.2
4,083,706	+				+0.1
4,083,707	-				+0.2
4,083,707	-				-1.9
4,083,707	-				-2.4
4,083,707	-				+1.3
4,083,707	-				-1.2
4,083,707	-				-1.5
4,083,707	-				+0.3
4,083,707	-				-0.5
4,083,707	-				-0.9
4,083,711	-				+1.0
4,083,742	-				-1.5
4,083,772	-				-0.2
4,083,808	+				+0.4
4,083,808	+				-0.5
4,083,809	-				+0.1
4,083,809	-				+0.7
4,083,889	-				-2.0
4,083,940	-				-0.6
4,083,940	-				+0.6
4,084,053	+		Echvi_3453	0.27	-0.8
4,084,054	-		Echvi_3453	0.28	+0.3
4,084,059	+		Echvi_3453	0.29	-0.7
4,084,059	+		Echvi_3453	0.29	-2.0
4,084,059	+		Echvi_3453	0.29	-0.5
4,084,060	-		Echvi_3453	0.29	+0.5
4,084,171	+		Echvi_3453	0.50	+0.6
4,084,282	-		Echvi_3453	0.71	-0.4
4,084,291	+		Echvi_3453	0.73	-1.2
4,084,292	-		Echvi_3453	0.73	-0.1
4,084,298	-		Echvi_3453	0.75	-1.1
4,084,325	-		Echvi_3453	0.80	-1.0
4,084,453	+				-0.4
4,084,453	+				-0.4
4,084,453	+				+0.8
4,084,453	+				+0.5
4,084,453	+				+0.3
4,084,453	+				-1.1
4,084,454	-				-0.8
4,084,454	-				-0.7
4,084,454	-				+0.9
4,084,454	-				-0.7
4,084,456	-				-0.2
4,084,537	+				+0.1
4,084,538	-				-0.1