Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3325

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
3,928,350	+		Echvi_3323	0.83	+1.0
3,928,350	+		Echvi_3323	0.83	+0.3
3,928,350	+		Echvi_3323	0.83	-0.4
3,928,351	-		Echvi_3323	0.84	-0.7
3,928,353	+		Echvi_3323	0.84	+0.8
3,928,353	+		Echvi_3323	0.84	-0.3
3,928,353	+		Echvi_3323	0.84	-1.0
3,928,366	+		Echvi_3323	0.85	-1.0
3,928,380	-		Echvi_3323	0.86	+1.0
3,928,380	-		Echvi_3323	0.86	-0.7
3,928,397	+		Echvi_3323	0.88	-1.4
3,928,398	-		Echvi_3323	0.88	-0.5
3,928,398	-		Echvi_3323	0.88	+1.7
3,928,398	-		Echvi_3323	0.88	+0.4
3,928,406	-		Echvi_3323	0.89	-0.6
3,928,424	+				-0.5
3,928,435	+				-0.9
3,928,436	-				+3.3
3,928,448	+				-0.5
3,928,458	+				-0.3
3,928,516	+				-0.2
3,928,517	-				+1.4
3,928,519	-				+0.3
3,928,519	-				+0.8
3,928,552	-				+0.3
3,928,552	-				+1.1
3,928,565	-				+0.4
3,928,565	-				-1.0
3,928,669	+				+1.5
3,928,669	+				+0.2
3,928,701	+				+0.3
3,928,701	+				-0.5
3,928,720	-				+1.2
3,928,765	+				+2.3
3,928,795	+				-0.4
3,928,795	+				-2.0
3,928,796	-				+0.1
3,928,843	+				+0.7
3,928,844	-				-0.7
3,928,882	-				-2.0
3,928,908	+		Echvi_3324	0.11	+0.5
3,929,105	-				-0.0
3,929,123	-				-0.1
3,929,146	-				-1.5
3,929,193	-				-1.0
3,929,229	+				-0.7
3,929,260	+				-1.3
3,929,280	+				+1.4
3,929,373	+		Echvi_3325	0.37	+1.3
3,929,397	+		Echvi_3325	0.48	-0.7
3,929,415	-		Echvi_3325	0.56	+1.1
3,929,428	-		Echvi_3325	0.62	+0.7
3,929,432	+		Echvi_3325	0.64	+0.7
3,929,433	-		Echvi_3325	0.64	-0.5
3,929,433	-		Echvi_3325	0.64	+0.5
3,929,504	+				-0.2
3,929,523	+				+0.0
3,929,537	-				+0.5
3,929,537	-				+0.8
3,929,545	+				-0.7
3,929,546	-				+0.1
3,929,546	-				-0.8
3,929,617	+				+0.1
3,929,623	+				+1.9
3,929,623	+				-0.2
3,929,626	-				+0.3
3,929,666	+				+0.6
3,929,667	-				+1.2
3,929,686	+				-0.9
3,929,687	-				+1.3
3,929,687	-				+0.4
3,929,774	+				-0.6
3,929,896	-		Echvi_3326	0.20	+0.6
3,929,896	-		Echvi_3326	0.20	+0.6
3,929,933	-		Echvi_3326	0.24	-0.1
3,929,933	-		Echvi_3326	0.24	-1.0
3,929,940	-		Echvi_3326	0.24	+1.0
3,929,981	+		Echvi_3326	0.29	-2.1
3,929,982	-		Echvi_3326	0.29	-0.5
3,929,982	-		Echvi_3326	0.29	-0.3
3,930,030	-		Echvi_3326	0.34	+0.3
3,930,034	-		Echvi_3326	0.34	+0.1
3,930,086	+		Echvi_3326	0.40	-0.6
3,930,086	+		Echvi_3326	0.40	+0.6
3,930,087	-		Echvi_3326	0.40	-0.6
3,930,087	-		Echvi_3326	0.40	+0.2
3,930,161	+		Echvi_3326	0.48	-3.4
3,930,196	+		Echvi_3326	0.51	+0.7
3,930,196	+		Echvi_3326	0.51	-0.2
3,930,197	-		Echvi_3326	0.51	+0.5
3,930,248	+		Echvi_3326	0.57	+0.3
3,930,272	+		Echvi_3326	0.59	+1.6
3,930,272	+		Echvi_3326	0.59	-0.3
3,930,272	+		Echvi_3326	0.59	+1.5
3,930,272	+		Echvi_3326	0.59	+1.6
3,930,272	+		Echvi_3326	0.59	-0.1
3,930,272	+		Echvi_3326	0.59	+0.3
3,930,357	+		Echvi_3326	0.68	-0.5
3,930,440	+		Echvi_3326	0.77	-0.5
3,930,445	+		Echvi_3326	0.77	+0.3
3,930,445	+		Echvi_3326	0.77	-0.4