Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3121

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
3,729,431	+		Echvi_3119	0.75	-0.6
3,729,434	-		Echvi_3119	0.75	-0.1
3,729,434	-		Echvi_3119	0.75	-0.3
3,729,448	-		Echvi_3119	0.77	-0.1
3,729,448	-		Echvi_3119	0.77	+0.9
3,729,560	+				+0.2
3,729,561	-				-1.2
3,729,561	-				+0.4
3,729,585	-				-1.4
3,729,623	-				-1.7
3,729,643	-				+0.1
3,729,643	-				-0.5
3,729,658	-				-0.4
3,729,667	-				-1.0
3,729,738	+				-1.4
3,729,764	+				-0.1
3,729,765	-				-0.2
3,729,775	+				-0.7
3,729,775	+				-0.3
3,729,775	+				-0.3
3,729,775	+				+0.2
3,729,776	-				+0.5
3,729,776	-				+0.6
3,729,776	-				+0.3
3,729,860	-				+0.5
3,729,867	-				-0.4
3,729,903	+				-0.6
3,729,903	+				-0.1
3,729,903	+				+1.4
3,729,903	+				+1.2
3,729,904	-				-0.3
3,729,938	-				-0.2
3,729,962	+				-0.5
3,729,962	+				+0.6
3,729,963	-				-0.8
3,729,963	-				+1.9
3,729,963	-				-0.2
3,729,966	+				-0.3
3,729,967	-				+0.6
3,729,979	-				-0.1
3,730,046	+				+1.6
3,730,062	-				+0.8
3,730,098	-		Echvi_3120	0.19	+2.6
3,730,214	-		Echvi_3120	0.87	-0.2
3,730,214	-		Echvi_3120	0.87	+2.6
3,730,214	-		Echvi_3120	0.87	+0.7
3,730,214	-		Echvi_3120	0.87	+0.8
3,730,214	-		Echvi_3120	0.87	+3.6
3,730,216	-		Echvi_3120	0.88	-1.7
3,730,216	-		Echvi_3120	0.88	+2.5
3,730,216	-		Echvi_3120	0.88	-2.4
3,730,216	-		Echvi_3120	0.88	-0.7
3,730,216	-		Echvi_3120	0.88	-1.3
3,730,216	-		Echvi_3120	0.88	-1.2
3,730,242	-				+0.4
3,730,267	-				-1.7
3,730,270	-				-2.5
3,730,347	-				+0.4
3,730,351	-				+1.5
3,730,353	+				+0.0
3,730,353	+				-0.2
3,730,355	+				-1.0
3,730,356	-				-1.0
3,730,357	+				+0.4
3,730,357	+				+0.8
3,730,357	+				+0.9
3,730,357	+				-1.6
3,730,357	+				-0.5
3,730,359	+				+0.3
3,730,359	+				+1.6
3,730,359	+				+0.6
3,730,394	+				-0.2
3,730,394	+				-1.4
3,730,422	+				+1.2
3,730,424	+				-1.7
3,730,434	+				+0.0
3,730,435	-				+2.0
3,730,521	+		Echvi_3121	0.20	-0.7
3,730,524	+		Echvi_3121	0.21	+1.0
3,730,525	-		Echvi_3121	0.21	+0.4
3,730,528	+		Echvi_3121	0.21	-0.2
3,730,528	+		Echvi_3121	0.21	+0.7
3,730,544	-		Echvi_3121	0.24	+0.3
3,730,564	+		Echvi_3121	0.28	-0.3
3,730,564	+		Echvi_3121	0.28	+0.7
3,730,564	+		Echvi_3121	0.28	-0.2
3,730,564	+		Echvi_3121	0.28	-1.6
3,730,565	-		Echvi_3121	0.28	+0.0
3,730,565	-		Echvi_3121	0.28	+0.1
3,730,565	-		Echvi_3121	0.28	-1.2
3,730,565	-		Echvi_3121	0.28	-1.0
3,730,565	-		Echvi_3121	0.28	-0.9
3,730,565	-		Echvi_3121	0.28	-1.0
3,730,566	+		Echvi_3121	0.28	-1.0
3,730,576	+		Echvi_3121	0.30	-0.1
3,730,602	-		Echvi_3121	0.34	+2.1
3,730,644	+		Echvi_3121	0.41	+0.8
3,730,644	+		Echvi_3121	0.41	+0.2
3,730,657	-		Echvi_3121	0.43	+0.4
3,730,696	+		Echvi_3121	0.50	+1.2
3,730,697	-		Echvi_3121	0.50	+0.3
3,730,735	-		Echvi_3121	0.57	-0.4
3,730,735	-		Echvi_3121	0.57	-0.3
3,731,002	+				-0.1
3,731,002	+				+1.0
3,731,003	-				+0.7
3,731,003	-				+2.3
3,731,003	-				+1.2
3,731,003	-				+1.3
3,731,046	+				+1.0
3,731,090	+				+0.6
3,731,105	-				-0.5
3,731,105	-				-0.7
3,731,167	+		Echvi_3122	0.13	-0.6
3,731,167	+		Echvi_3122	0.13	+0.4
3,731,167	+		Echvi_3122	0.13	+0.3
3,731,168	-		Echvi_3122	0.13	-0.2
3,731,168	-		Echvi_3122	0.13	-0.4
3,731,168	-		Echvi_3122	0.13	-0.2
3,731,168	-		Echvi_3122	0.13	+0.3
3,731,168	-		Echvi_3122	0.13	-0.1
3,731,168	-		Echvi_3122	0.13	+0.2
3,731,168	-		Echvi_3122	0.13	-0.1
3,731,168	-		Echvi_3122	0.13	+0.0
3,731,185	+		Echvi_3122	0.14	+0.5
3,731,281	+		Echvi_3122	0.21	+0.8
3,731,289	-		Echvi_3122	0.22	-1.7
3,731,289	-		Echvi_3122	0.22	-0.2
3,731,314	-		Echvi_3122	0.23	+2.2
3,731,443	+		Echvi_3122	0.33	+0.9
3,731,450	-		Echvi_3122	0.33	+0.4
3,731,450	-		Echvi_3122	0.33	+0.1
3,731,487	+		Echvi_3122	0.36	-1.9
3,731,487	+		Echvi_3122	0.36	-0.2
3,731,527	+				+2.2
3,731,528	-		Echvi_3122	0.39	+0.9
3,731,538	+		Echvi_3122	0.39	+0.0
3,731,539	-		Echvi_3122	0.39	+0.3
3,731,539	-		Echvi_3122	0.39	-1.0
3,731,628	+		Echvi_3122	0.46	-0.3
3,731,629	-		Echvi_3122	0.46	+0.7
3,731,645	+		Echvi_3122	0.47	-0.1
3,731,646	-		Echvi_3122	0.47	-1.2
3,731,646	-		Echvi_3122	0.47	-0.6
3,731,646	-		Echvi_3122	0.47	+0.6
3,731,646	-		Echvi_3122	0.47	-0.0
3,731,646	-		Echvi_3122	0.47	-1.2
3,731,703	+		Echvi_3122	0.51	-0.2
3,731,704	-		Echvi_3122	0.51	+0.0
3,731,735	+		Echvi_3122	0.53	-0.1
3,731,735	+		Echvi_3122	0.53	-0.8
3,731,735	+		Echvi_3122	0.53	+0.2
3,731,736	-		Echvi_3122	0.54	-1.1
3,731,774	-		Echvi_3122	0.56	+0.1
3,731,862	+		Echvi_3122	0.63	+0.7
3,731,891	+		Echvi_3122	0.65	-0.7
3,731,891	+		Echvi_3122	0.65	-0.4
3,731,891	+		Echvi_3122	0.65	-0.2
3,731,891	+		Echvi_3122	0.65	-0.3
3,731,892	-		Echvi_3122	0.65	-2.0
3,731,892	-		Echvi_3122	0.65	-1.4
3,731,892	-		Echvi_3122	0.65	+0.4
3,731,894	-		Echvi_3122	0.65	+2.2
3,731,914	+		Echvi_3122	0.66	-1.1
3,731,944	+		Echvi_3122	0.68	+0.1
3,731,945	-		Echvi_3122	0.68	-0.6
3,731,946	+		Echvi_3122	0.69	-0.4
3,731,947	-		Echvi_3122	0.69	-0.4
3,731,947	-		Echvi_3122	0.69	+0.2
3,731,956	-		Echvi_3122	0.69	-0.5
3,731,956	-		Echvi_3122	0.69	+1.4