Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3013

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
3,598,192	+		Echvi_3012	0.35	-0.5
3,598,193	-		Echvi_3012	0.35	-0.8
3,598,196	+		Echvi_3012	0.36	+0.2
3,598,196	+		Echvi_3012	0.36	+0.5
3,598,197	-		Echvi_3012	0.36	-2.1
3,598,197	-		Echvi_3012	0.36	-0.4
3,598,197	-		Echvi_3012	0.36	+0.7
3,598,214	-		Echvi_3012	0.37	+1.6
3,598,312	-		Echvi_3012	0.45	-0.5
3,598,330	+		Echvi_3012	0.46	-1.3
3,598,330	+		Echvi_3012	0.46	+0.2
3,598,356	+		Echvi_3012	0.48	+0.5
3,598,356	+		Echvi_3012	0.48	+2.1
3,598,356	+		Echvi_3012	0.48	-0.2
3,598,356	+		Echvi_3012	0.48	+1.2
3,598,356	+		Echvi_3012	0.48	-0.5
3,598,356	+		Echvi_3012	0.48	-0.4
3,598,356	+		Echvi_3012	0.48	+1.6
3,598,357	-		Echvi_3012	0.49	+0.8
3,598,357	-		Echvi_3012	0.49	-0.7
3,598,357	-		Echvi_3012	0.49	-1.1
3,598,453	+		Echvi_3012	0.56	+0.9
3,598,460	+		Echvi_3012	0.57	+0.3
3,598,479	+		Echvi_3012	0.58	-0.3
3,598,500	+		Echvi_3012	0.60	+1.0
3,598,514	+		Echvi_3012	0.61	-0.8
3,598,514	+		Echvi_3012	0.61	-0.2
3,598,515	-		Echvi_3012	0.61	-0.1
3,598,549	-		Echvi_3012	0.64	-0.9
3,598,578	-		Echvi_3012	0.66	-0.3
3,598,590	+		Echvi_3012	0.67	-0.5
3,598,592	+		Echvi_3012	0.67	-0.5
3,598,597	-		Echvi_3012	0.68	-0.6
3,598,597	-		Echvi_3012	0.68	-0.2
3,598,634	-		Echvi_3012	0.71	-1.4
3,598,650	+		Echvi_3012	0.72	-1.3
3,598,650	+		Echvi_3012	0.72	+0.3
3,598,651	-		Echvi_3012	0.72	-0.8
3,598,745	-		Echvi_3012	0.80	+0.4
3,598,801	+		Echvi_3012	0.84	-2.3
3,598,802	-		Echvi_3012	0.84	+0.6
3,598,802	-		Echvi_3012	0.84	-2.3
3,598,838	+		Echvi_3012	0.87	-0.5
3,598,906	+				-2.4
3,598,906	+				+1.7
3,598,928	-				+0.5
3,599,259	+		Echvi_3013	0.30	-0.0
3,599,260	-		Echvi_3013	0.31	+0.2
3,599,309	-		Echvi_3013	0.39	+0.3
3,599,336	+		Echvi_3013	0.43	-0.8
3,599,341	+		Echvi_3013	0.44	+0.7
3,599,342	-		Echvi_3013	0.44	+0.8
3,599,342	-		Echvi_3013	0.44	+0.1
3,599,384	+		Echvi_3013	0.52	-0.1
3,599,387	+		Echvi_3013	0.52	-0.4
3,599,387	+		Echvi_3013	0.52	+1.0
3,599,420	+		Echvi_3013	0.58	-0.8
3,599,420	+		Echvi_3013	0.58	-1.2
3,599,421	-		Echvi_3013	0.58	+0.8
3,599,421	-		Echvi_3013	0.58	+1.6
3,599,421	-		Echvi_3013	0.58	+0.6
3,599,421	-		Echvi_3013	0.58	-0.3
3,599,421	-		Echvi_3013	0.58	-0.4
3,599,423	-		Echvi_3013	0.58	+0.4
3,599,429	+		Echvi_3013	0.59	-0.3
3,599,429	+		Echvi_3013	0.59	+0.3
3,599,429	+		Echvi_3013	0.59	-0.7
3,599,430	-		Echvi_3013	0.59	-1.0
3,599,430	-		Echvi_3013	0.59	+0.2
3,599,432	-		Echvi_3013	0.60	-0.0
3,599,432	-		Echvi_3013	0.60	-0.1
3,599,432	-		Echvi_3013	0.60	-0.0
3,599,432	-		Echvi_3013	0.60	-0.1
3,599,432	-		Echvi_3013	0.60	-3.2
3,599,432	-		Echvi_3013	0.60	+1.4
3,599,435	+		Echvi_3013	0.60	+1.6
3,599,435	+		Echvi_3013	0.60	-2.0
3,599,435	+		Echvi_3013	0.60	+1.2
3,599,435	+		Echvi_3013	0.60	+0.6
3,599,436	-		Echvi_3013	0.60	-0.8
3,599,447	+		Echvi_3013	0.62	+0.3
3,599,470	+		Echvi_3013	0.66	+0.9
3,599,471	-		Echvi_3013	0.66	+2.8
3,599,482	-		Echvi_3013	0.68	-0.9
3,599,572	-		Echvi_3013	0.83	-2.1
3,599,576	-		Echvi_3013	0.84	+1.9
3,599,645	-				-0.3
3,599,677	+				-0.8
3,599,765	+				-0.5
3,599,766	-				-0.3
3,599,777	+				-1.9
3,599,778	-				+0.2
3,599,785	+				-0.0
3,599,785	+				-0.1
3,599,785	+				-1.3
3,599,785	+				-0.8
3,599,786	-				+0.7
3,599,829	+				-0.2
3,599,861	-				-1.2
3,599,923	-				+0.4
3,599,923	-				+0.1
3,599,936	+				-0.6
3,599,936	+				-0.1
3,599,946	+				+1.1
3,599,954	-				+2.2
3,599,954	-				-2.2
3,600,016	+				-0.4
3,600,017	-				-0.1
3,600,110	-				+0.2
3,600,301	-		Echvi_3014	0.16	-2.5
3,600,301	-		Echvi_3014	0.16	-1.5
3,600,301	-		Echvi_3014	0.16	-0.0
3,600,399	+		Echvi_3014	0.20	+1.3
3,600,399	+		Echvi_3014	0.20	-1.4
3,600,399	+		Echvi_3014	0.20	+0.5
3,600,400	-		Echvi_3014	0.20	+1.2
3,600,401	+		Echvi_3014	0.20	-0.5
3,600,402	-		Echvi_3014	0.21	-0.3
3,600,402	-		Echvi_3014	0.21	-0.8
3,600,402	-		Echvi_3014	0.21	+0.2
3,600,402	-		Echvi_3014	0.21	-0.7
3,600,495	+		Echvi_3014	0.25	-2.1
3,600,495	+		Echvi_3014	0.25	-0.4
3,600,496	-		Echvi_3014	0.25	-0.3
3,600,514	-		Echvi_3014	0.26	-2.4
3,600,526	+		Echvi_3014	0.26	-1.6
3,600,561	+		Echvi_3014	0.28	+2.8
3,600,562	-		Echvi_3014	0.28	+1.9
3,600,562	-		Echvi_3014	0.28	-0.2
3,600,562	-		Echvi_3014	0.28	+0.5
3,600,625	+		Echvi_3014	0.31	+0.9
3,600,625	+		Echvi_3014	0.31	+0.6
3,600,625	+		Echvi_3014	0.31	-0.2
3,600,625	+		Echvi_3014	0.31	-1.9
3,600,625	+		Echvi_3014	0.31	-0.0
3,600,626	-		Echvi_3014	0.31	-0.5