Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2820

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
3,375,339	+		Echvi_2818	0.67	+1.2
3,375,339	+		Echvi_2818	0.67	-0.5
3,375,340	-		Echvi_2818	0.67	+1.9
3,375,340	-		Echvi_2818	0.67	-0.2
3,375,340	-		Echvi_2818	0.67	+0.4
3,375,340	-		Echvi_2818	0.67	-2.1
3,375,444	-		Echvi_2818	0.84	-0.7
3,375,491	+				-0.0
3,375,491	+				-0.1
3,375,491	+				-0.2
3,375,492	-				-0.7
3,375,503	+				+0.3
3,375,504	-				-0.6
3,375,524	-				-0.4
3,375,568	-				-0.8
3,375,602	+		Echvi_2819	0.13	+1.6
3,375,609	-		Echvi_2819	0.15	-0.9
3,375,609	-		Echvi_2819	0.15	+0.3
3,375,614	+		Echvi_2819	0.15	+0.2
3,375,649	+		Echvi_2819	0.21	+0.8
3,375,771	-		Echvi_2819	0.42	+0.5
3,375,771	-		Echvi_2819	0.42	+1.4
3,375,771	-		Echvi_2819	0.42	-1.5
3,375,837	+		Echvi_2819	0.53	+0.2
3,375,838	-		Echvi_2819	0.53	-1.6
3,375,949	+		Echvi_2819	0.72	+0.6
3,375,949	+		Echvi_2819	0.72	+0.4
3,375,949	+		Echvi_2819	0.72	-0.2
3,375,949	+		Echvi_2819	0.72	+0.5
3,375,949	+		Echvi_2819	0.72	+0.9
3,375,949	+		Echvi_2819	0.72	-1.2
3,375,949	+		Echvi_2819	0.72	-0.7
3,375,949	+		Echvi_2819	0.72	-0.2
3,375,949	+		Echvi_2819	0.72	-0.5
3,375,949	+		Echvi_2819	0.72	-0.6
3,375,950	-		Echvi_2819	0.72	+0.8
3,375,955	+		Echvi_2819	0.73	-0.2
3,375,956	-		Echvi_2819	0.73	-0.5
3,375,976	+		Echvi_2819	0.76	+0.5
3,375,976	+		Echvi_2819	0.76	-0.9
3,375,977	-		Echvi_2819	0.76	-0.9
3,376,072	+				+1.6
3,376,072	+				-0.2
3,376,073	-				+0.6
3,376,095	+				+0.5
3,376,119	-				-1.2
3,376,119	-				+0.5
3,376,119	-				-1.7
3,376,119	-				-0.4
3,376,119	-				-2.9
3,376,229	-				-0.1
3,376,233	-				-1.8
3,376,236	+				-1.3
3,376,292	+				-0.4
3,376,292	+				+1.1
3,376,322	+				-0.8
3,376,391	-		Echvi_2820	0.15	+0.3
3,376,391	-		Echvi_2820	0.15	-0.2
3,376,391	-		Echvi_2820	0.15	-1.0
3,376,448	+		Echvi_2820	0.29	+1.4
3,376,630	-		Echvi_2820	0.72	+0.4
3,376,650	-		Echvi_2820	0.77	-0.8
3,376,685	-		Echvi_2820	0.86	+1.4
3,376,686	+		Echvi_2820	0.86	+0.8
3,376,688	+		Echvi_2820	0.86	-0.1
3,376,689	-		Echvi_2820	0.87	+1.4
3,376,716	+				+0.8
3,376,717	-				-0.9
3,376,739	+				+1.2
3,376,749	+				-0.6
3,376,749	+				-0.8
3,376,768	+				+0.4
3,376,781	+				+0.2
3,376,869	-		Echvi_2821	0.16	-0.2
3,377,041	+		Echvi_2821	0.35	-1.0
3,377,045	+		Echvi_2821	0.35	+2.6
3,377,045	+		Echvi_2821	0.35	-0.7
3,377,045	+		Echvi_2821	0.35	-0.3
3,377,046	-		Echvi_2821	0.36	-0.5
3,377,046	-		Echvi_2821	0.36	+0.1
3,377,072	+		Echvi_2821	0.38	+1.0
3,377,072	+		Echvi_2821	0.38	-0.3
3,377,072	+		Echvi_2821	0.38	-0.5
3,377,072	+		Echvi_2821	0.38	+0.8
3,377,073	-		Echvi_2821	0.38	+1.2
3,377,073	-		Echvi_2821	0.38	+3.3
3,377,135	-		Echvi_2821	0.45	+1.3
3,377,135	-		Echvi_2821	0.45	+0.0
3,377,191	+		Echvi_2821	0.51	-1.1
3,377,206	+		Echvi_2821	0.53	+0.3
3,377,236	+		Echvi_2821	0.56	+0.0
3,377,253	+		Echvi_2821	0.58	-0.9
3,377,285	+		Echvi_2821	0.62	-0.1
3,377,285	+		Echvi_2821	0.62	+0.6
3,377,416	-		Echvi_2821	0.76	+0.1
3,377,416	-		Echvi_2821	0.76	-0.3
3,377,416	-		Echvi_2821	0.76	+0.3
3,377,417	+		Echvi_2821	0.76	-1.0
3,377,417	+		Echvi_2821	0.76	+0.9
3,377,417	+		Echvi_2821	0.76	-0.5
3,377,420	+		Echvi_2821	0.76	-0.1
3,377,420	+		Echvi_2821	0.76	-0.1
3,377,423	+		Echvi_2821	0.77	-0.3
3,377,423	+		Echvi_2821	0.77	+1.0
3,377,448	+		Echvi_2821	0.79	-1.3
3,377,449	-		Echvi_2821	0.80	-0.1
3,377,459	+		Echvi_2821	0.81	-0.1
3,377,459	+		Echvi_2821	0.81	-0.1
3,377,462	-		Echvi_2821	0.81	+0.2
3,377,625	+				+0.1
3,377,626	-				-1.7
3,377,626	-				-0.0
3,377,626	-				-1.8
3,377,644	+				+2.8
3,377,644	+				+0.4
3,377,645	-				-0.9
3,377,659	+				-0.9
3,377,659	+				+0.0
3,377,660	-				+1.1
3,377,660	-				-2.1
3,377,660	-				-0.4
3,377,708	+				-0.7