Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2438

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
2,892,658	+		Echvi_2437	0.85	+0.9
2,892,659	-		Echvi_2437	0.85	-2.8
2,892,659	-		Echvi_2437	0.85	+0.0
2,892,659	-		Echvi_2437	0.85	-1.9
2,892,836	+				-0.4
2,892,857	-				+0.2
2,892,857	-				-0.2
2,892,857	-				-1.2
2,892,976	+				-0.6
2,892,994	+				-0.1
2,893,006	+				-0.6
2,893,011	+				+0.7
2,893,123	-		Echvi_2438	0.24	+0.4
2,893,182	+		Echvi_2438	0.35	-0.2
2,893,245	+		Echvi_2438	0.47	-0.4
2,893,470	-		Echvi_2438	0.89	-1.0
2,893,472	+		Echvi_2438	0.89	+0.2
2,893,472	+		Echvi_2438	0.89	-1.0
2,893,473	-		Echvi_2438	0.90	-1.8
2,893,489	+				+0.2
2,893,489	+				-0.8
2,893,489	+				-0.2
2,893,490	-				+0.5
2,893,527	-				-1.2
2,893,705	+				-0.2
2,893,757	+				-1.1
2,893,757	+				-0.6
2,893,758	-				+0.3
2,893,758	-				-0.4
2,893,758	-				+0.0
2,893,787	+		Echvi_2439	0.11	+0.0
2,893,788	-		Echvi_2439	0.11	+0.0
2,893,788	-		Echvi_2439	0.11	-0.2
2,893,788	-		Echvi_2439	0.11	+0.6
2,893,788	-		Echvi_2439	0.11	-0.9
2,893,890	-		Echvi_2439	0.16	+1.3
2,893,896	-		Echvi_2439	0.17	+0.6
2,893,898	-		Echvi_2439	0.17	+0.3
2,893,974	+		Echvi_2439	0.21	+0.5
2,894,059	+				+1.6
2,894,059	+		Echvi_2439	0.25	+0.3
2,894,060	-		Echvi_2439	0.25	-0.4
2,894,080	+		Echvi_2439	0.26	+0.6
2,894,091	+		Echvi_2439	0.26	-0.1
2,894,092	-		Echvi_2439	0.26	+0.8
2,894,092	-		Echvi_2439	0.26	+1.0
2,894,092	-		Echvi_2439	0.26	-0.2
2,894,169	+		Echvi_2439	0.30	+0.4
2,894,169	+		Echvi_2439	0.30	+1.8
2,894,170	-		Echvi_2439	0.30	+0.2
2,894,170	-		Echvi_2439	0.30	+1.2
2,894,170	-		Echvi_2439	0.30	+0.3
2,894,179	+		Echvi_2439	0.31	-1.2
2,894,183	+		Echvi_2439	0.31	+0.3
2,894,183	+		Echvi_2439	0.31	-1.0
2,894,184	-		Echvi_2439	0.31	-0.4
2,894,184	-		Echvi_2439	0.31	+0.3
2,894,184	-		Echvi_2439	0.31	+0.3
2,894,224	+		Echvi_2439	0.33	-2.0
2,894,224	+		Echvi_2439	0.33	-2.0
2,894,315	+		Echvi_2439	0.38	+1.3
2,894,316	-		Echvi_2439	0.38	+0.5
2,894,408	+		Echvi_2439	0.42	-1.9
2,894,411	-		Echvi_2439	0.42	-2.0