Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1667

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
1,937,937	+		Echvi_1666	0.15	-1.0
1,937,938	-		Echvi_1666	0.15	+0.7
1,937,981	+		Echvi_1666	0.19	-0.2
1,938,069	+		Echvi_1666	0.29	+0.0
1,938,069	+		Echvi_1666	0.29	+0.8
1,938,069	+		Echvi_1666	0.29	-2.0
1,938,070	-		Echvi_1666	0.29	+0.9
1,938,070	-		Echvi_1666	0.29	-0.9
1,938,074	+		Echvi_1666	0.29	-1.8
1,938,074	+		Echvi_1666	0.29	+0.8
1,938,216	-		Echvi_1666	0.45	-0.9
1,938,219	+		Echvi_1666	0.45	-0.1
1,938,219	+		Echvi_1666	0.45	+0.2
1,938,220	-		Echvi_1666	0.45	-0.9
1,938,220	-		Echvi_1666	0.45	-0.8
1,938,251	-		Echvi_1666	0.49	-0.3
1,938,251	-		Echvi_1666	0.49	-0.2
1,938,251	-		Echvi_1666	0.49	+2.3
1,938,478	-		Echvi_1666	0.73	+0.2
1,938,513	+		Echvi_1666	0.77	-1.5
1,938,576	+		Echvi_1666	0.84	-0.2
1,938,680	-				-0.2
1,938,724	+				+0.2
1,938,724	+				-0.1
1,938,725	-				-0.7
1,938,725	-				+0.5
1,938,725	-				+0.5
1,938,725	-				-0.2
1,938,725	-				+0.1
1,938,725	-				-0.0
1,938,726	+				+1.8
1,938,727	-				-0.2
1,938,727	-				+0.1
1,938,728	+				+2.1
1,938,728	+				+0.0
1,938,729	-				-0.3
1,938,729	-				+1.1
1,938,733	+				+0.1
1,938,734	-				+0.4
1,938,734	-				-0.9
1,938,743	-				+0.8
1,938,744	+				+1.0
1,938,745	-				-0.3
1,938,745	-				+1.2
1,938,745	-				-0.5
1,938,745	-				-1.5
1,938,756	+				-0.8
1,938,759	+				-0.3
1,938,772	+				+0.8
1,938,796	+				-0.1
1,938,797	-				+0.2
1,938,803	+				-0.3
1,938,810	-				+0.1
1,938,885	+				-2.1
1,938,925	+				-0.4
1,938,925	+				-2.5
1,938,925	+				+0.1
1,938,926	-				-0.3
1,938,941	-				+0.4
1,939,066	-				+0.5
1,939,250	-		Echvi_1667	0.12	-0.1
1,939,278	+		Echvi_1667	0.13	-1.5
1,939,278	+		Echvi_1667	0.13	-1.9
1,939,279	-		Echvi_1667	0.13	+0.4
1,939,279	-		Echvi_1667	0.13	+1.8
1,939,422	+		Echvi_1667	0.18	-0.8
1,939,422	+		Echvi_1667	0.18	-0.9
1,939,422	+		Echvi_1667	0.18	-2.5
1,939,422	+		Echvi_1667	0.18	-1.0
1,939,436	+		Echvi_1667	0.19	-0.1
1,939,436	+		Echvi_1667	0.19	+0.6
1,939,480	+		Echvi_1667	0.21	-1.2
1,939,486	-		Echvi_1667	0.21	-0.2
1,939,524	+		Echvi_1667	0.22	+0.7
1,939,525	-		Echvi_1667	0.22	-0.3
1,939,684	-		Echvi_1667	0.28	+1.2
1,939,685	+		Echvi_1667	0.28	-0.7
1,939,719	+		Echvi_1667	0.29	-1.8
1,939,720	-		Echvi_1667	0.29	-0.6
1,939,720	-		Echvi_1667	0.29	-1.5
1,939,761	+		Echvi_1667	0.31	-3.1
1,939,761	+		Echvi_1667	0.31	+0.4
1,939,762	-		Echvi_1667	0.31	-0.0
1,939,762	-		Echvi_1667	0.31	+0.5
1,939,774	-		Echvi_1667	0.31	-0.7
1,939,776	-		Echvi_1667	0.31	-0.5
1,940,010	-		Echvi_1667	0.40	+0.8
1,940,030	+		Echvi_1667	0.41	+0.7
1,940,030	+		Echvi_1667	0.41	-1.5
1,940,030	+		Echvi_1667	0.41	-1.5
1,940,034	+		Echvi_1667	0.41	-0.8
1,940,035	-		Echvi_1667	0.41	-0.2
1,940,058	+		Echvi_1667	0.42	+0.4
1,940,121	-		Echvi_1667	0.44	-0.6
1,940,253	+		Echvi_1667	0.49	-2.6
1,940,269	-		Echvi_1667	0.49	-0.8
1,940,271	-		Echvi_1667	0.49	-1.8
1,940,287	+		Echvi_1667	0.50	-1.2
1,940,331	+		Echvi_1667	0.52	+0.3
1,940,392	-		Echvi_1667	0.54	-0.3
1,940,418	+		Echvi_1667	0.55	-0.6
1,940,460	+		Echvi_1667	0.56	-0.2
1,940,460	+		Echvi_1667	0.56	-0.0
1,940,737	+		Echvi_1667	0.66	+0.2
1,940,802	+		Echvi_1667	0.69	-0.6
1,940,802	+		Echvi_1667	0.69	+0.6
1,940,803	-		Echvi_1667	0.69	+0.7
1,940,803	-		Echvi_1667	0.69	+0.5
1,940,874	+		Echvi_1667	0.71	-0.2
1,940,970	+		Echvi_1667	0.75	-0.6
1,940,971	-		Echvi_1667	0.75	-0.5
1,940,984	+		Echvi_1667	0.75	+0.8
1,940,984	+		Echvi_1667	0.75	+0.3
1,940,985	-		Echvi_1667	0.75	+1.1
1,940,985	-		Echvi_1667	0.75	-2.0
1,941,055	+		Echvi_1667	0.78	+0.4
1,941,055	+		Echvi_1667	0.78	+0.7
1,941,055	+		Echvi_1667	0.78	-0.1
1,941,056	-		Echvi_1667	0.78	-0.8
1,941,099	-		Echvi_1667	0.79	-1.2
1,941,110	-		Echvi_1667	0.80	+0.6
1,941,374	+		Echvi_1667	0.89	-0.0
1,941,374	+		Echvi_1667	0.89	+0.4
1,941,435	-				-0.0
1,941,435	-				-0.1
1,941,510	+				-1.5
1,941,545	-				-0.4
1,941,559	+				-0.5
1,941,610	+				+0.2
1,941,610	+				+0.3
1,941,675	+				-0.5
1,941,676	-				-0.1
1,941,685	+				+0.7
1,941,692	+				+0.5
1,941,693	-				+1.8
1,941,693	-				-0.9
1,941,701	+				+1.1
1,941,701	+				+0.5
1,941,701	+				-0.1
1,941,800	+				-0.2
1,941,800	+				-1.2
1,941,801	-				+1.6
1,941,801	-				+0.3
1,941,844	+				+0.2
1,941,844	+				-0.4
1,941,845	-				-0.9
1,941,845	-				-2.5
1,941,877	+				-1.2
1,941,878	-				+0.7
1,941,878	-				-0.4
1,941,878	-				+0.4
1,941,878	-				+1.1
1,942,011	+				-1.8
1,942,011	+				+0.6
1,942,170	-				+0.6
1,942,241	-		Echvi_1668	0.12	-0.7
1,942,387	+		Echvi_1668	0.16	-0.9
1,942,426	-		Echvi_1668	0.17	-1.0
1,942,426	-		Echvi_1668	0.17	+0.3
1,942,444	+		Echvi_1668	0.18	-0.4
1,942,444	+		Echvi_1668	0.18	+0.5
1,942,444	+		Echvi_1668	0.18	-0.1
1,942,444	+		Echvi_1668	0.18	+0.3
1,942,445	-		Echvi_1668	0.18	+0.2
1,942,511	+		Echvi_1668	0.19	-0.1
1,942,511	+		Echvi_1668	0.19	-1.9
1,942,512	-		Echvi_1668	0.19	-0.9
1,942,552	-		Echvi_1668	0.21	-1.2
1,942,575	+		Echvi_1668	0.21	-1.1
1,942,642	+		Echvi_1668	0.23	-1.0
1,942,643	-		Echvi_1668	0.23	+2.4
1,942,643	-		Echvi_1668	0.23	-0.3