Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1497

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
1,716,036	-		Echvi_1495	0.75	+1.1
1,716,036	-		Echvi_1495	0.75	+0.9
1,716,036	-		Echvi_1495	0.75	-1.5
1,716,083	-		Echvi_1495	0.83	+0.2
1,716,094	-		Echvi_1495	0.85	+0.3
1,716,094	-		Echvi_1495	0.85	-1.3
1,716,109	-		Echvi_1495	0.87	-0.2
1,716,147	+				+1.6
1,716,147	+				-0.7
1,716,184	+				+0.1
1,716,185	-				+0.2
1,716,193	-				-0.4
1,716,193	-				-0.4
1,716,292	+				+0.5
1,716,331	-				-0.1
1,716,376	+				+1.7
1,716,376	+				+1.1
1,716,377	-				+0.5
1,716,378	+				-0.2
1,716,378	+				+0.5
1,716,380	+				-0.3
1,716,380	+				+0.7
1,716,380	+				+1.8
1,716,389	+				+0.1
1,716,389	+				-2.1
1,716,395	+				+1.5
1,716,424	+		Echvi_1496	0.12	-0.2
1,716,424	+		Echvi_1496	0.12	+0.5
1,716,424	+		Echvi_1496	0.12	+0.6
1,716,426	+		Echvi_1496	0.13	+0.2
1,716,427	-		Echvi_1496	0.13	+1.1
1,716,448	+		Echvi_1496	0.17	-0.4
1,716,448	+		Echvi_1496	0.17	-0.1
1,716,450	+		Echvi_1496	0.18	+1.6
1,716,451	-		Echvi_1496	0.18	-0.4
1,716,509	+		Echvi_1496	0.30	-0.7
1,716,606	+		Echvi_1496	0.49	+0.7
1,716,607	-		Echvi_1496	0.50	-1.0
1,716,646	+		Echvi_1496	0.58	+0.8
1,716,646	+		Echvi_1496	0.58	+0.4
1,716,685	+		Echvi_1496	0.66	-0.2
1,716,686	-		Echvi_1496	0.66	+0.6
1,716,729	-		Echvi_1496	0.75	+0.2
1,716,740	+		Echvi_1496	0.77	-0.3
1,716,771	+		Echvi_1496	0.83	+0.7
1,716,771	+		Echvi_1496	0.83	-0.7
1,716,771	+		Echvi_1496	0.83	-0.4
1,716,785	-		Echvi_1496	0.86	-0.3
1,716,815	+				-0.8
1,716,815	+				+0.8
1,716,862	-				-1.1
1,716,927	+				-0.5
1,716,966	-				-1.2
1,717,159	-		Echvi_1497	0.21	-1.9
1,717,219	-		Echvi_1497	0.25	-0.7
1,717,219	-				+2.8
1,717,219	-		Echvi_1497	0.25	-0.0
1,717,286	-		Echvi_1497	0.30	-0.1
1,717,297	+		Echvi_1497	0.31	-0.7
1,717,297	+		Echvi_1497	0.31	+1.9
1,717,391	+		Echvi_1497	0.38	-0.5
1,717,391	+		Echvi_1497	0.38	-2.3
1,717,391	+		Echvi_1497	0.38	-0.3
1,717,391	+		Echvi_1497	0.38	-1.4
1,717,391	+		Echvi_1497	0.38	+0.5
1,717,391	+		Echvi_1497	0.38	-2.9
1,717,392	-		Echvi_1497	0.38	+1.2
1,717,462	-		Echvi_1497	0.43	+0.0
1,717,462	-		Echvi_1497	0.43	+0.4
1,717,462	-		Echvi_1497	0.43	-1.9
1,717,462	-		Echvi_1497	0.43	-1.4
1,717,473	-		Echvi_1497	0.43	-0.3
1,717,473	-		Echvi_1497	0.43	-1.7
1,717,496	-		Echvi_1497	0.45	-1.3
1,717,530	+		Echvi_1497	0.48	-1.1
1,717,531	-		Echvi_1497	0.48	+1.8
1,717,643	+		Echvi_1497	0.56	-1.0
1,717,726	+		Echvi_1497	0.61	+0.8
1,717,727	-		Echvi_1497	0.61	+0.7
1,717,727	-		Echvi_1497	0.61	-1.0
1,717,727	-		Echvi_1497	0.61	+0.2
1,717,727	-		Echvi_1497	0.61	-0.6
1,717,767	-		Echvi_1497	0.64	-1.7
1,717,787	+		Echvi_1497	0.66	+1.3
1,717,787	+		Echvi_1497	0.66	-0.0
1,717,788	-		Echvi_1497	0.66	-0.9
1,717,865	+		Echvi_1497	0.71	+1.8
1,717,876	+		Echvi_1497	0.72	-0.0
1,717,877	-		Echvi_1497	0.72	+0.0
1,717,899	-		Echvi_1497	0.74	-0.1
1,717,911	-		Echvi_1497	0.75	-1.1
1,717,930	-		Echvi_1497	0.76	-0.8
1,717,980	+		Echvi_1497	0.79	-2.0
1,717,980	+		Echvi_1497	0.79	-0.0
1,717,999	+		Echvi_1497	0.81	+0.5
1,717,999	+		Echvi_1497	0.81	-2.1
1,717,999	+		Echvi_1497	0.81	+1.0
1,718,000	-		Echvi_1497	0.81	-1.8
1,718,000	-		Echvi_1497	0.81	-0.0
1,718,000	-		Echvi_1497	0.81	+1.0
1,718,016	-		Echvi_1497	0.82	-0.4
1,718,075	+		Echvi_1497	0.86	-0.1
1,718,075	+		Echvi_1497	0.86	-2.1
1,718,177	+				-1.7
1,718,178	-				+1.0
1,718,201	-				+0.4
1,718,201	-				+0.2
1,718,301	-				-0.3
1,718,301	-				+0.1
1,718,302	+				-0.3
1,718,303	-				-0.8
1,718,314	+				+0.3
1,718,324	-				+1.0
1,718,344	-				+0.2
1,718,347	-				-0.0
1,718,379	-				+1.8
1,718,623	-				+0.3
1,718,623	-				-1.8
1,718,626	+				-1.0
1,718,627	-				+0.2
1,718,629	+				+0.4
1,718,629	+				-0.0
1,718,629	+				+0.1
1,718,629	+				-0.5
1,718,643	+				+0.6
1,718,643	+				+1.1
1,718,711	-				+0.6
1,718,736	+				-1.0
1,718,737	-				+0.6
1,718,774	+				+0.8
1,718,774	+				-0.3
1,718,774	+				-1.0
1,718,774	+				+1.0
1,718,774	+				+0.7
1,718,775	-				-0.2
1,718,775	-				+0.4
1,718,775	-				-0.6
1,718,776	+				+0.2
1,718,776	+				-0.7
1,718,848	-				+0.1
1,718,848	-				+0.8
1,718,872	+				-0.7
1,718,873	-				+0.3
1,718,914	+		Echvi_1498	0.11	-0.7
1,718,914	+		Echvi_1498	0.11	-0.6
1,718,914	+		Echvi_1498	0.11	+1.2
1,718,915	-		Echvi_1498	0.11	+0.2
1,718,915	-		Echvi_1498	0.11	-0.2
1,718,915	-		Echvi_1498	0.11	+1.2
1,718,961	-		Echvi_1498	0.13	+0.1
1,718,961	-		Echvi_1498	0.13	+0.1
1,718,961	-		Echvi_1498	0.13	-1.2
1,718,964	+		Echvi_1498	0.13	-0.2
1,718,965	-		Echvi_1498	0.13	-0.1
1,718,968	+		Echvi_1498	0.14	+0.8
1,718,969	-		Echvi_1498	0.14	-0.5
1,718,969	-		Echvi_1498	0.14	+0.6
1,718,969	-		Echvi_1498	0.14	+0.5
1,718,982	+		Echvi_1498	0.14	-1.8
1,718,982	+		Echvi_1498	0.14	-0.3
1,718,983	-		Echvi_1498	0.14	+0.1
1,719,116	+		Echvi_1498	0.19	-0.1
1,719,116	+		Echvi_1498	0.19	+0.1
1,719,124	+		Echvi_1498	0.20	-1.1
1,719,125	-		Echvi_1498	0.20	-0.1
1,719,151	-		Echvi_1498	0.21	-0.3
1,719,175	+		Echvi_1498	0.22	-1.6
1,719,206	+		Echvi_1498	0.23	+0.5