Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1265

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
1,449,543	-		Echvi_1263	0.67	+0.4
1,449,544	+		Echvi_1263	0.67	-1.5
1,449,545	-		Echvi_1263	0.67	-0.5
1,449,545	-		Echvi_1263	0.67	-0.1
1,449,566	+		Echvi_1263	0.70	+1.1
1,449,567	-		Echvi_1263	0.70	-0.4
1,449,567	-		Echvi_1263	0.70	-0.1
1,449,623	+		Echvi_1263	0.78	-0.6
1,449,655	-		Echvi_1263	0.83	+2.2
1,449,655	-		Echvi_1263	0.83	+0.1
1,449,655	-		Echvi_1263	0.83	+0.2
1,449,655	-		Echvi_1263	0.83	+0.2
1,449,719	+				-0.4
1,449,719	+				-0.2
1,449,720	-				+1.1
1,449,720	-				+0.2
1,449,741	-				-1.2
1,449,741	-				+0.0
1,449,741	-				-0.9
1,449,741	-				+1.4
1,449,842	-				-1.2
1,449,865	-				-0.7
1,449,946	+				-1.5
1,449,970	+				-1.0
1,449,971	-				-0.1
1,449,971	-				+0.6
1,450,139	+		Echvi_1264	0.46	+0.5
1,450,189	-		Echvi_1264	0.86	-0.2
1,450,189	-		Echvi_1264	0.86	+0.0
1,450,191	-		Echvi_1264	0.88	+3.1
1,450,203	+				-0.5
1,450,234	+				-1.5
1,450,234	+				+2.4
1,450,312	-				-2.0
1,450,320	-				+0.3
1,450,470	+		Echvi_1265	0.31	-1.4
1,450,537	+		Echvi_1265	0.85	-0.5
1,450,537	+		Echvi_1265	0.85	+0.4
1,450,537	+		Echvi_1265	0.85	-0.0
1,450,538	-		Echvi_1265	0.86	-1.8
1,450,538	-		Echvi_1265	0.86	-0.8
1,450,538	-		Echvi_1265	0.86	-2.8
1,450,538	-		Echvi_1265	0.86	-1.5
1,450,538	-		Echvi_1265	0.86	-1.0
1,450,538	-		Echvi_1265	0.86	+0.8
1,450,539	+		Echvi_1265	0.87	-1.5
1,450,539	+		Echvi_1265	0.87	+0.3
1,450,615	+				-0.2
1,450,639	-				+0.5
1,450,639	-				+1.6
1,450,644	+				-0.1
1,450,645	-				-0.1
1,450,645	-				+0.2
1,450,651	-				+1.8
1,450,668	-				+0.1
1,450,668	-				-1.2
1,450,807	+				+0.5
1,450,808	-				-0.7
1,450,808	-				-0.6
1,450,823	+				+1.2
1,450,976	-				+0.2
1,450,976	-				+1.3
1,450,976	-				+0.3
1,451,007	+				+0.3
1,451,056	-				+1.0
1,451,075	-				-0.7
1,451,075	-				-0.3
1,451,075	-				-0.2
1,451,077	-				+0.1
1,451,077	-				-1.0
1,451,089	+				-1.3
1,451,177	+				-0.8
1,451,177	+				-1.2
1,451,178	-				+1.7
1,451,178	-				-0.6
1,451,184	-				-0.5
1,451,186	+				-0.5
1,451,207	-				+0.1
1,451,207	-				+0.4
1,451,208	+				-0.6
1,451,208	+				+0.1
1,451,209	-				+1.2
1,451,209	-				-1.1
1,451,283	+				-0.6
1,451,289	-				-1.6
1,451,298	-				-0.3
1,451,339	+				-0.8
1,451,340	-				+0.4
1,451,369	+				+0.4
1,451,370	-				-1.0
1,451,370	-				-0.6
1,451,392	+				-0.8
1,451,496	-				-0.2