Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1087

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
1,247,357	-		Echvi_1086	0.48	+0.1
1,247,357	-		Echvi_1086	0.48	+1.3
1,247,383	+		Echvi_1086	0.56	+1.4
1,247,385	+		Echvi_1086	0.56	-0.1
1,247,386	-		Echvi_1086	0.57	+0.1
1,247,459	+		Echvi_1086	0.79	-0.2
1,247,459	+		Echvi_1086	0.79	+0.2
1,247,563	-				+1.2
1,247,677	+				-1.2
1,247,728	-				+0.2
1,247,729	+				+0.3
1,247,729	+				+0.2
1,247,750	+				-1.3
1,247,751	-				-0.3
1,247,756	-				+0.1
1,247,787	-				-0.0
1,247,787	-				+0.3
1,247,787	-				-0.7
1,247,810	+				-0.5
1,247,878	+				+0.4
1,247,882	+				+0.9
1,247,899	+				+3.0
1,247,899	+				+0.7
1,247,951	-				-0.2
1,247,951	-				+0.3
1,247,967	+				-0.4
1,247,967	+				+0.1
1,248,010	+				-0.6
1,248,011	-				-0.2
1,248,011	-				+0.5
1,248,030	-				-0.8
1,248,034	-				+0.6
1,248,034	-				+1.0
1,248,159	+				-1.3
1,248,160	-				+0.1
1,248,160	-				+1.6
1,248,163	+				-0.4
1,248,163	+				+0.6
1,248,163	+				-0.2
1,248,163	+				+0.7
1,248,163	+				-0.6
1,248,163	+				-1.2
1,248,163	+				+1.6
1,248,164	-				-0.6
1,248,182	+				-0.6
1,248,186	+				-0.7
1,248,187	-				-0.3
1,248,190	+				+0.8
1,248,190	+				+0.4
1,248,190	+				+1.3
1,248,190	+				+1.5
1,248,191	-				-1.7
1,248,191	-				-0.9
1,248,192	+				+2.1
1,248,193	-				+1.0
1,248,196	-				-0.2
1,248,213	+				-1.2
1,248,214	-				-0.4
1,248,214	-				+0.0
1,248,214	-				-1.0
1,248,241	+				+0.1
1,248,306	+				+1.6
1,248,319	+				-0.8
1,248,330	+				-0.4
1,248,331	-				+0.9
1,248,344	-				+0.1
1,248,476	+		Echvi_1087	0.21	-0.8
1,248,476	+		Echvi_1087	0.21	-1.0
1,248,476	+		Echvi_1087	0.21	-0.6
1,248,477	-		Echvi_1087	0.21	-1.6
1,248,576	+		Echvi_1087	0.38	+0.9
1,248,665	+		Echvi_1087	0.53	+0.1
1,248,666	-		Echvi_1087	0.53	-0.2
1,248,666	-		Echvi_1087	0.53	-0.6
1,248,689	+		Echvi_1087	0.57	+0.1
1,248,690	-		Echvi_1087	0.57	+1.1
1,248,693	+		Echvi_1087	0.58	-0.8
1,248,695	+		Echvi_1087	0.58	+0.8
1,248,731	-		Echvi_1087	0.64	+0.2
1,248,739	+		Echvi_1087	0.66	-0.7
1,248,764	+		Echvi_1087	0.70	+0.1
1,248,764	+		Echvi_1087	0.70	+0.4
1,248,764	+		Echvi_1087	0.70	-1.1
1,248,764	+		Echvi_1087	0.70	-1.5
1,248,764	+		Echvi_1087	0.70	-1.0
1,248,764	+		Echvi_1087	0.70	-1.1
1,248,765	-		Echvi_1087	0.70	-1.4
1,248,765	-		Echvi_1087	0.70	-1.4
1,248,765	-		Echvi_1087	0.70	-0.5
1,248,765	-		Echvi_1087	0.70	-1.2
1,248,784	-		Echvi_1087	0.74	-0.2
1,248,818	+		Echvi_1087	0.79	-0.5
1,248,818	+		Echvi_1087	0.79	+0.1
1,248,819	-		Echvi_1087	0.79	+0.1
1,248,849	+		Echvi_1087	0.85	-0.3
1,248,849	+		Echvi_1087	0.85	-1.3
1,248,896	+				-0.1
1,248,896	+				-0.2
1,248,896	+				+1.2
1,248,897	-				-0.3
1,248,897	-				-0.2
1,248,901	+				+1.0
1,248,907	-				+0.5
1,248,939	-				+0.4
1,248,944	+				-1.1
1,248,945	-				-1.2
1,248,947	+				-0.5
1,248,947	+				-1.2
1,248,948	-				-1.0
1,248,953	+				+0.8
1,248,953	+				+0.1
1,248,954	-				+0.2
1,248,954	-				-0.1
1,248,986	+				-0.7
1,248,986	+				+0.7
1,248,987	-				+0.2
1,248,987	-				-0.1
1,248,987	-				-0.9
1,249,072	-		Echvi_1088	0.12	-0.4
1,249,081	-		Echvi_1088	0.14	-0.7
1,249,139	-		Echvi_1088	0.28	+0.2
1,249,155	+		Echvi_1088	0.32	+0.6
1,249,156	-		Echvi_1088	0.32	-1.4
1,249,162	+		Echvi_1088	0.34	+0.6
1,249,199	+		Echvi_1088	0.43	-0.2
1,249,225	-		Echvi_1088	0.49	+0.2
1,249,239	+		Echvi_1088	0.52	+0.6
1,249,240	-		Echvi_1088	0.53	+1.4
1,249,242	+		Echvi_1088	0.53	+0.3
1,249,271	+		Echvi_1088	0.60	-0.2
1,249,290	+		Echvi_1088	0.65	-0.5
1,249,291	-		Echvi_1088	0.65	-0.6
1,249,296	+		Echvi_1088	0.66	+0.8
1,249,297	-		Echvi_1088	0.66	+0.5
1,249,297	-		Echvi_1088	0.66	-0.3
1,249,297	-		Echvi_1088	0.66	+0.1
1,249,298	+		Echvi_1088	0.67	+0.0
1,249,402	+				-0.5
1,249,403	-				+1.8
1,249,436	-				+0.2
1,249,556	+				+0.7
1,249,573	-				-0.2
1,249,576	+				-0.5
1,249,577	-				+0.3
1,249,577	-				-0.5
1,249,586	-				-1.6
1,249,607	-				-0.1
1,249,612	+				+0.5
1,249,748	-		Echvi_1089	0.17	+0.4
1,249,761	-		Echvi_1089	0.17	-0.1
1,249,777	+		Echvi_1089	0.18	+0.4
1,249,804	+		Echvi_1089	0.20	-1.6
1,249,804	+		Echvi_1089	0.20	+2.3
1,249,804	+		Echvi_1089	0.20	+0.2
1,249,828	+		Echvi_1089	0.21	-1.3
1,249,835	-		Echvi_1089	0.22	+0.4
1,249,846	+		Echvi_1089	0.22	+0.2
1,249,846	+		Echvi_1089	0.22	+0.5
1,249,846	+		Echvi_1089	0.22	+0.5
1,249,846	+		Echvi_1089	0.22	+0.8
1,249,846	+		Echvi_1089	0.22	-1.0
1,249,847	-		Echvi_1089	0.22	+0.5
1,249,847	-		Echvi_1089	0.22	+0.2
1,249,847	-		Echvi_1089	0.22	-1.5
1,249,847	-		Echvi_1089	0.22	-0.6
1,249,847	-		Echvi_1089	0.22	+0.0
1,249,847	-		Echvi_1089	0.22	+0.5
1,249,847	-		Echvi_1089	0.22	-0.4
1,249,847	-		Echvi_1089	0.22	+0.2
1,249,919	-		Echvi_1089	0.26	-0.1
1,249,923	+		Echvi_1089	0.26	-2.6