Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1048

Experiment: m.b. Spectinomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.12 mg/ml
1,209,152	+				-2.9
1,209,152	+				+0.2
1,209,153	-				+0.3
1,209,165	-				-1.6
1,209,165	-				+0.9
1,209,191	-				-0.5
1,209,216	+				-0.8
1,209,216	+				-0.9
1,209,216	+				+0.8
1,209,217	-				-1.8
1,209,228	+				-0.5
1,209,228	+				-1.5
1,209,229	-				+1.8
1,209,229	-				-0.2
1,209,245	+				+1.8
1,209,246	-				-1.5
1,209,266	-				+0.3
1,209,266	-				-1.0
1,209,280	+				-1.3
1,209,280	+				+1.2
1,209,281	-				-0.4
1,209,285	+				-0.5
1,209,306	-				+0.3
1,209,314	+				+1.0
1,209,315	-				-2.7
1,209,315	-				-1.5
1,209,364	+				+0.7
1,209,364	+				+0.9
1,209,365	-				+0.2
1,209,368	+				+0.7
1,209,368	+				+3.2
1,209,368	+				+0.5
1,209,368	+				+0.2
1,209,368	+				+1.2
1,209,368	+				+0.6
1,209,369	-				+1.1
1,209,369	-				+0.2
1,209,369	-				-0.3
1,209,393	+				+0.8
1,209,394	-				-0.2
1,209,436	+		Echvi_1047	0.10	+1.1
1,209,436	+		Echvi_1047	0.10	+0.2
1,209,437	-		Echvi_1047	0.10	-0.7
1,209,437	-		Echvi_1047	0.10	+0.2
1,209,509	+		Echvi_1047	0.20	-0.7
1,209,520	-		Echvi_1047	0.21	+0.8
1,209,565	-		Echvi_1047	0.27	-0.4
1,209,585	+		Echvi_1047	0.30	-0.3
1,209,585	+		Echvi_1047	0.30	-1.6
1,209,590	+		Echvi_1047	0.31	-1.2
1,209,590	+		Echvi_1047	0.31	+0.7
1,209,590	+		Echvi_1047	0.31	-0.0
1,209,591	-		Echvi_1047	0.31	-0.2
1,209,591	-		Echvi_1047	0.31	-0.3
1,209,591	-		Echvi_1047	0.31	+2.2
1,209,591	-		Echvi_1047	0.31	-1.6
1,209,593	+		Echvi_1047	0.31	+0.6
1,209,593	+		Echvi_1047	0.31	-0.8
1,209,593	+		Echvi_1047	0.31	+0.8
1,209,593	+		Echvi_1047	0.31	+1.2
1,209,594	-		Echvi_1047	0.31	+0.3
1,209,594	-		Echvi_1047	0.31	-0.8
1,209,645	-		Echvi_1047	0.38	+0.2
1,209,654	-		Echvi_1047	0.39	-0.8
1,209,654	-		Echvi_1047	0.39	-1.0
1,209,663	+		Echvi_1047	0.40	-1.2
1,209,693	+		Echvi_1047	0.44	+0.5
1,209,750	+		Echvi_1047	0.52	-0.3
1,209,882	+		Echvi_1047	0.69	+0.3
1,209,882	+		Echvi_1047	0.69	-2.9
1,209,928	+		Echvi_1047	0.75	-0.8
1,209,929	-		Echvi_1047	0.75	+0.3
1,209,929	-		Echvi_1047	0.75	-0.9
1,209,999	+		Echvi_1047	0.84	-0.3
1,209,999	+		Echvi_1047	0.84	-0.4
1,209,999	+		Echvi_1047	0.84	-0.0
1,209,999	+		Echvi_1047	0.84	-0.7
1,210,000	-		Echvi_1047	0.85	-1.7
1,210,000	-		Echvi_1047	0.85	+1.6
1,210,103	-				+1.3
1,210,110	+				-0.7
1,210,110	+				-0.3
1,210,111	-				+0.1
1,210,111	-				-0.2
1,210,111	-				-0.4
1,210,111	-				-0.8
1,210,111	-				+0.7
1,210,111	-				-0.2
1,210,111	-				+0.6
1,210,147	+				-0.1
1,210,147	+				+0.3
1,210,148	-				-0.6
1,210,151	+				-0.3
1,210,158	+				-0.2
1,210,200	+				+0.2
1,210,223	+		Echvi_1048	0.12	-0.0
1,210,223	+		Echvi_1048	0.12	-0.8
1,210,265	-		Echvi_1048	0.18	-1.1
1,210,374	-		Echvi_1048	0.36	-1.6
1,210,412	-		Echvi_1048	0.42	+0.5
1,210,490	+		Echvi_1048	0.54	+0.7
1,210,490	+		Echvi_1048	0.54	-0.9
1,210,506	+		Echvi_1048	0.57	+0.6
1,210,506	+		Echvi_1048	0.57	+0.7
1,210,506	+		Echvi_1048	0.57	+1.8
1,210,514	+		Echvi_1048	0.58	+0.2
1,210,514	+		Echvi_1048	0.58	+1.3
1,210,514	+		Echvi_1048	0.58	-2.0
1,210,514	+		Echvi_1048	0.58	-1.1
1,210,514	+		Echvi_1048	0.58	-1.9
1,210,514	+		Echvi_1048	0.58	-2.0
1,210,514	+		Echvi_1048	0.58	-0.3
1,210,514	+		Echvi_1048	0.58	+0.7
1,210,515	-		Echvi_1048	0.58	-1.1
1,210,515	-		Echvi_1048	0.58	-1.9
1,210,515	-		Echvi_1048	0.58	-1.6
1,210,518	+		Echvi_1048	0.59	+0.3
1,210,518	+		Echvi_1048	0.59	+0.2
1,210,518	+		Echvi_1048	0.59	+0.2
1,210,518	+		Echvi_1048	0.59	-0.5
1,210,518	+		Echvi_1048	0.59	-0.2
1,210,518	+		Echvi_1048	0.59	-0.9
1,210,518	+		Echvi_1048	0.59	+0.9
1,210,519	-		Echvi_1048	0.59	-0.2
1,210,519	-		Echvi_1048	0.59	-0.2
1,210,519	-		Echvi_1048	0.59	-0.2
1,210,561	-		Echvi_1048	0.66	-1.2
1,210,616	+		Echvi_1048	0.74	+0.5
1,210,617	-		Echvi_1048	0.74	-0.9
1,210,617	-		Echvi_1048	0.74	-1.0
1,210,657	-		Echvi_1048	0.81	+1.0
1,210,673	+		Echvi_1048	0.83	+0.9
1,210,674	-		Echvi_1048	0.84	+1.0
1,210,674	-		Echvi_1048	0.84	-1.0
1,210,712	+		Echvi_1048	0.90	-0.0
1,210,712	+		Echvi_1048	0.90	-0.3
1,210,712	+		Echvi_1048	0.90	-0.4
1,210,717	+				+0.3
1,210,717	+				+0.6
1,210,718	-				+0.2
1,210,718	-				+0.5
1,210,748	+				-0.9
1,210,766	+				+0.8
1,210,767	-				-0.6
1,210,783	+				-0.5
1,210,783	+				-0.6
1,210,783	+				+0.6
1,210,805	-				+0.7
1,210,805	-				-1.4
1,210,805	-				+1.4
1,210,814	+				-0.8
1,210,821	+				-1.1
1,210,822	-				-0.5
1,210,825	+				+0.0
1,210,826	-				+2.2
1,210,826	-				-0.3
1,210,826	-				+0.3
1,210,841	+				+0.1
1,210,848	+				-2.1
1,210,864	+				+1.5
1,210,865	-				+0.1
1,210,871	+				-1.3
1,210,871	+				-0.0
1,210,872	-				-1.0
1,210,875	+				-0.3
1,210,875	+				-0.2
1,210,875	+				+0.8
1,210,875	+				+0.8
1,210,875	+				+1.4
1,210,901	+				-0.2
1,210,901	+				-0.8
1,210,902	-				-0.7
1,210,924	+				-1.5
1,210,924	+				+0.3
1,210,924	+				+1.8
1,210,924	+				+0.4
1,210,985	-		Echvi_1049	0.12	-0.2
1,210,985	-		Echvi_1049	0.12	-0.2
1,210,985	-		Echvi_1049	0.12	-2.1
1,210,985	-		Echvi_1049	0.12	+0.8
1,211,011	+		Echvi_1049	0.19	-0.2
1,211,015	+		Echvi_1049	0.20	-0.3
1,211,015	+		Echvi_1049	0.20	-2.3
1,211,016	-		Echvi_1049	0.20	+0.8
1,211,033	+		Echvi_1049	0.25	-1.3
1,211,039	+		Echvi_1049	0.27	-0.9
1,211,040	-		Echvi_1049	0.27	+0.2
1,211,040	-		Echvi_1049	0.27	+1.0
1,211,040	-		Echvi_1049	0.27	-0.3
1,211,040	-		Echvi_1049	0.27	+0.8
1,211,083	+		Echvi_1049	0.38	+0.0
1,211,083	+		Echvi_1049	0.38	+0.0
1,211,083	+		Echvi_1049	0.38	-0.1
1,211,084	-		Echvi_1049	0.39	-0.5
1,211,085	+		Echvi_1049	0.39	+0.5
1,211,085	+		Echvi_1049	0.39	-1.0
1,211,086	-		Echvi_1049	0.39	-1.1
1,211,086	-		Echvi_1049	0.39	+1.2
1,211,094	-		Echvi_1049	0.41	+0.0
1,211,131	+		Echvi_1049	0.51	+0.0
1,211,138	-		Echvi_1049	0.53	-0.8
1,211,199	+		Echvi_1049	0.70	+0.5
1,211,230	+		Echvi_1049	0.78	-1.3
1,211,257	+		Echvi_1049	0.85	+2.1
1,211,257	+		Echvi_1049	0.85	+0.5
1,211,257	+		Echvi_1049	0.85	-0.3
1,211,258	-		Echvi_1049	0.85	-0.2
1,211,258	-		Echvi_1049	0.85	+1.8
1,211,258	-		Echvi_1049	0.85	-0.8
1,211,361	+				+2.2
1,211,362	-				-0.1
1,211,362	-				-0.5
1,211,368	+				+0.4
1,211,368	+				+1.0
1,211,368	+				-1.9
1,211,369	-				-1.2
1,211,370	+				+0.8
1,211,370	+				-0.2
1,211,371	-				-0.6
1,211,371	-				+0.8
1,211,418	+				-0.5
1,211,444	-				+0.7
1,211,470	+				+0.2
1,211,494	+				-0.2
1,211,494	+				+0.0
1,211,496	+				+1.3
1,211,497	-				-1.5
1,211,497	-				+1.1
1,211,528	+				-0.2
1,211,528	+				+0.3
1,211,528	+				-0.3
1,211,528	+				-2.1
1,211,528	+				+0.2
1,211,529	-				-0.3
1,211,529	-				+0.2
1,211,549	-				-0.0
1,211,549	-				+0.0
1,211,549	-				+1.5
1,211,549	-				-0.9
1,211,550	+				-0.4
1,211,550	+				-0.3
1,211,550	+				+0.5
1,211,551	-				-0.5
1,211,571	+				+1.2
1,211,571	+				-0.8
1,211,572	-				-0.1
1,211,572	-				+0.1
1,211,572	-				-1.3
1,211,615	+				-1.2
1,211,615	+				+0.5
1,211,615	+				-0.6
1,211,615	+				+1.4
1,211,615	+				+0.5
1,211,625	+				-1.3
1,211,638	+				-1.9
1,211,639	-				+0.4
1,211,639	-				+0.2
1,211,639	-				-0.3
1,211,652	+				+0.8
1,211,665	+		Echvi_1050	0.10	+1.5
1,211,668	+		Echvi_1050	0.11	-1.3
1,211,668	+		Echvi_1050	0.11	+0.1
1,211,669	-		Echvi_1050	0.11	+0.2
1,211,669	-		Echvi_1050	0.11	+1.1
1,211,673	+		Echvi_1050	0.12	-0.9
1,211,676	+		Echvi_1050	0.12	+0.2
1,211,724	+		Echvi_1050	0.22	-1.5
1,211,746	-		Echvi_1050	0.26	-0.8
1,211,758	+		Echvi_1050	0.29	+0.5
1,211,758	+		Echvi_1050	0.29	+0.0
1,211,758	+		Echvi_1050	0.29	+0.1
1,211,759	-		Echvi_1050	0.29	-1.2
1,211,759	-		Echvi_1050	0.29	-1.8