Experiment: m.b. Spectinomycin 0.12 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0638 and Echvi_0639 are separated by 335 nucleotides Echvi_0639 and Echvi_0640 are separated by 106 nucleotides Echvi_0640 and Echvi_0641 are separated by 80 nucleotides
Echvi_0638: Echvi_0638 - hypothetical protein, at 722,395 to 723,111
_0638
Echvi_0639: Echvi_0639 - hypothetical protein, at 723,447 to 723,692
_0639
Echvi_0640: Echvi_0640 - hypothetical protein, at 723,799 to 724,092
_0640
Echvi_0641: Echvi_0641 - Transposase and inactivated derivatives, at 724,173 to 725,405
_0641
Position (kb) 723
724
725 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 722.829 kb on - strand, within Echvi_0638 at 722.912 kb on - strand, within Echvi_0638 at 722.914 kb on + strand, within Echvi_0638 at 722.914 kb on + strand, within Echvi_0638 at 722.915 kb on - strand, within Echvi_0638 at 722.915 kb on - strand, within Echvi_0638 at 722.986 kb on + strand, within Echvi_0638 at 722.986 kb on + strand, within Echvi_0638 at 722.987 kb on - strand, within Echvi_0638 at 723.005 kb on + strand, within Echvi_0638 at 723.093 kb on - strand at 723.109 kb on + strand at 723.127 kb on - strand at 723.149 kb on - strand at 723.156 kb on + strand at 723.156 kb on + strand at 723.157 kb on - strand at 723.265 kb on + strand at 723.265 kb on + strand at 723.266 kb on - strand at 723.266 kb on - strand at 723.298 kb on + strand at 723.298 kb on + strand at 723.298 kb on + strand at 723.298 kb on + strand at 723.299 kb on - strand at 723.382 kb on + strand at 723.382 kb on + strand at 723.382 kb on + strand at 723.407 kb on - strand at 723.453 kb on + strand at 723.453 kb on + strand at 723.498 kb on - strand, within Echvi_0639 at 723.498 kb on - strand, within Echvi_0639 at 723.503 kb on + strand, within Echvi_0639 at 723.503 kb on + strand, within Echvi_0639 at 723.503 kb on + strand, within Echvi_0639 at 723.503 kb on + strand, within Echvi_0639 at 723.503 kb on + strand, within Echvi_0639 at 723.503 kb on + strand, within Echvi_0639 at 723.504 kb on - strand, within Echvi_0639 at 723.504 kb on - strand, within Echvi_0639 at 723.504 kb on - strand, within Echvi_0639 at 723.504 kb on - strand, within Echvi_0639 at 723.506 kb on + strand, within Echvi_0639 at 723.506 kb on + strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.507 kb on - strand, within Echvi_0639 at 723.568 kb on + strand, within Echvi_0639 at 723.740 kb on + strand at 723.824 kb on + strand at 723.824 kb on + strand at 723.825 kb on - strand at 723.825 kb on - strand at 723.899 kb on - strand, within Echvi_0640 at 723.926 kb on - strand, within Echvi_0640 at 723.983 kb on + strand, within Echvi_0640 at 723.984 kb on - strand, within Echvi_0640 at 724.003 kb on + strand, within Echvi_0640 at 724.010 kb on - strand, within Echvi_0640 at 724.010 kb on - strand, within Echvi_0640 at 724.016 kb on - strand, within Echvi_0640 at 724.102 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.12 mg/ml remove 722,829 - Echvi_0638 0.61 +0.9 722,912 - Echvi_0638 0.72 -0.5 722,914 + Echvi_0638 0.72 -2.1 722,914 + Echvi_0638 0.72 -2.2 722,915 - Echvi_0638 0.73 +0.5 722,915 - Echvi_0638 0.73 +0.6 722,986 + Echvi_0638 0.82 -0.7 722,986 + Echvi_0638 0.82 -0.3 722,987 - Echvi_0638 0.83 +0.3 723,005 + Echvi_0638 0.85 +0.8 723,093 - +0.3 723,109 + +0.3 723,127 - +0.6 723,149 - -0.3 723,156 + +0.3 723,156 + -1.5 723,157 - +0.1 723,265 + +2.8 723,265 + +0.7 723,266 - -0.4 723,266 - -0.8 723,298 + +0.5 723,298 + -0.4 723,298 + +0.6 723,298 + -1.2 723,299 - -1.1 723,382 + +1.3 723,382 + +0.3 723,382 + +0.8 723,407 - -0.6 723,453 + -1.6 723,453 + +0.2 723,498 - Echvi_0639 0.21 -0.1 723,498 - Echvi_0639 0.21 +0.3 723,503 + Echvi_0639 0.23 +0.1 723,503 + Echvi_0639 0.23 -0.3 723,503 + Echvi_0639 0.23 +1.2 723,503 + Echvi_0639 0.23 +1.1 723,503 + Echvi_0639 0.23 -1.6 723,503 + Echvi_0639 0.23 +1.8 723,504 - Echvi_0639 0.23 -1.2 723,504 - Echvi_0639 0.23 -2.7 723,504 - Echvi_0639 0.23 -0.8 723,504 - Echvi_0639 0.23 -0.9 723,506 + Echvi_0639 0.24 -0.4 723,506 + Echvi_0639 0.24 +0.0 723,507 - Echvi_0639 0.24 -0.1 723,507 - Echvi_0639 0.24 +0.2 723,507 - Echvi_0639 0.24 +0.7 723,507 - Echvi_0639 0.24 +0.6 723,507 - Echvi_0639 0.24 +1.0 723,507 - Echvi_0639 0.24 +0.4 723,507 - Echvi_0639 0.24 -0.6 723,568 + Echvi_0639 0.49 -0.6 723,740 + +0.4 723,824 + -0.8 723,824 + -0.3 723,825 - -0.7 723,825 - +1.8 723,899 - Echvi_0640 0.34 -0.4 723,926 - Echvi_0640 0.43 -2.8 723,983 + Echvi_0640 0.63 -1.2 723,984 - Echvi_0640 0.63 -1.1 724,003 + Echvi_0640 0.69 +0.3 724,010 - Echvi_0640 0.72 +0.3 724,010 - Echvi_0640 0.72 -1.0 724,016 - Echvi_0640 0.74 -0.1 724,102 - -2.3
Or see this region's nucleotide sequence