Strain Fitness in Pseudomonas sp. RS175 around PFR28_03331

Experiment: L-Lactate (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C) 10 mM
3,839,278	+		PFR28_03330	0.73	+1.3
3,839,297	+		PFR28_03330	0.73	-0.3
3,839,297	+		PFR28_03330	0.73	-0.1
3,839,297	+		PFR28_03330	0.73	-0.1
3,839,297	+		PFR28_03330	0.73	+0.6
3,839,297	+		PFR28_03330	0.73	+0.5
3,839,297	+		PFR28_03330	0.73	-2.3
3,839,297	+		PFR28_03330	0.73	-1.9
3,839,297	+		PFR28_03330	0.73	+1.3
3,839,298	-		PFR28_03330	0.73	-0.9
3,839,298	-		PFR28_03330	0.73	-1.7
3,839,298	-		PFR28_03330	0.73	-1.3
3,839,298	-		PFR28_03330	0.73	+1.2
3,839,298	-		PFR28_03330	0.73	+0.8
3,839,316	+		PFR28_03330	0.74	-1.0
3,839,316	+		PFR28_03330	0.74	+0.2
3,839,316	+		PFR28_03330	0.74	-0.7
3,839,357	+		PFR28_03330	0.75	-0.6
3,839,357	+		PFR28_03330	0.75	-0.4
3,839,357	+		PFR28_03330	0.75	-0.1
3,839,357	+		PFR28_03330	0.75	-0.6
3,839,358	-		PFR28_03330	0.75	+0.9
3,839,358	-		PFR28_03330	0.75	+1.2
3,839,358	-		PFR28_03330	0.75	-1.0
3,839,358	-		PFR28_03330	0.75	-0.2
3,839,360	+		PFR28_03330	0.76	-0.1
3,839,360	+		PFR28_03330	0.76	-2.0
3,839,360	+		PFR28_03330	0.76	+1.4
3,839,360	+		PFR28_03330	0.76	+1.7
3,839,360	+		PFR28_03330	0.76	+1.0
3,839,360	+		PFR28_03330	0.76	+0.4
3,839,360	+		PFR28_03330	0.76	+0.5
3,839,360	+		PFR28_03330	0.76	+1.3
3,839,360	+		PFR28_03330	0.76	-1.4
3,839,361	-		PFR28_03330	0.76	+0.3
3,839,361	-		PFR28_03330	0.76	+1.5
3,839,361	-		PFR28_03330	0.76	+0.7
3,839,361	-		PFR28_03330	0.76	-0.2
3,839,565	-		PFR28_03330	0.82	-0.8
3,839,565	-		PFR28_03330	0.82	-1.2
3,839,565	-		PFR28_03330	0.82	+1.3
3,839,649	+		PFR28_03330	0.85	-0.7
3,839,765	+		PFR28_03330	0.89	-0.8
3,839,765	+		PFR28_03330	0.89	+1.2
3,839,765	+		PFR28_03330	0.89	-0.2
3,839,765	+		PFR28_03330	0.89	-0.6
3,839,765	+		PFR28_03330	0.89	+1.1
3,839,765	+		PFR28_03330	0.89	-1.3
3,839,765	+		PFR28_03330	0.89	+0.6
3,839,765	+		PFR28_03330	0.89	-0.0
3,839,765	+		PFR28_03330	0.89	-0.5
3,839,765	+		PFR28_03330	0.89	-0.2
3,839,765	+		PFR28_03330	0.89	-0.3
3,839,765	+		PFR28_03330	0.89	-0.2
3,839,766	-		PFR28_03330	0.89	-1.1
3,839,766	-		PFR28_03330	0.89	-0.1
3,839,766	-		PFR28_03330	0.89	+1.8
3,839,766	-		PFR28_03330	0.89	+1.1
3,839,766	-		PFR28_03330	0.89	-1.8
3,839,766	-		PFR28_03330	0.89	+2.7
3,839,766	-		PFR28_03330	0.89	-1.9
3,839,766	-		PFR28_03330	0.89	+2.3
3,839,766	-		PFR28_03330	0.89	-0.8
3,839,766	-		PFR28_03330	0.89	+0.6
3,839,775	+		PFR28_03330	0.89	+0.4
3,839,775	+		PFR28_03330	0.89	-0.2
3,839,776	-		PFR28_03330	0.89	+1.2
3,839,914	-				-0.9
3,839,914	-				-0.2
3,839,950	-				+2.7
3,840,051	+				+1.7
3,840,065	+				-0.5
3,840,065	+				+1.1
3,840,065	+				-2.2
3,840,066	-				-0.0
3,840,066	-				-0.6
3,840,066	-				+0.6
3,840,066	-				-1.1
3,840,066	-				+0.9
3,840,066	-				+1.0
3,840,066	-				+1.1
3,840,116	+				-0.9
3,840,117	-				+0.2
3,840,117	-				+0.3
3,840,361	+				+1.4
3,840,385	+				-0.2
3,840,420	-				-1.9
3,840,603	+		PFR28_03332	0.31	-1.6
3,840,603	+		PFR28_03332	0.31	-1.1
3,840,604	-		PFR28_03332	0.31	-1.4
3,840,605	+		PFR28_03332	0.31	+0.4
3,840,605	+		PFR28_03332	0.31	+2.7
3,840,605	+		PFR28_03332	0.31	+0.8
3,840,605	+		PFR28_03332	0.31	-0.3
3,840,605	+		PFR28_03332	0.31	-0.2
3,840,605	+		PFR28_03332	0.31	-0.8
3,840,606	-		PFR28_03332	0.32	-0.1
3,840,606	-		PFR28_03332	0.32	-0.3
3,840,606	-		PFR28_03332	0.32	+0.1
3,840,606	-		PFR28_03332	0.32	-1.9
3,840,606	-		PFR28_03332	0.32	+0.6
3,840,606	-		PFR28_03332	0.32	+0.8
3,840,606	-		PFR28_03332	0.32	-1.3
3,840,606	-		PFR28_03332	0.32	-0.3
3,840,606	-		PFR28_03332	0.32	-3.8
3,840,606	-		PFR28_03332	0.32	-0.9
3,840,606	-		PFR28_03332	0.32	-0.6
3,840,673	-		PFR28_03332	0.41	+1.1
3,840,719	+		PFR28_03332	0.47	+0.6
3,840,719	+		PFR28_03332	0.47	+0.7
3,840,720	-		PFR28_03332	0.48	+0.4
3,840,780	+		PFR28_03332	0.56	+1.8
3,840,780	+		PFR28_03332	0.56	-1.3
3,840,780	+		PFR28_03332	0.56	+0.2
3,840,780	+		PFR28_03332	0.56	-0.8
3,840,780	+		PFR28_03332	0.56	-0.6
3,840,874	+		PFR28_03332	0.69	+0.6
3,840,875	-		PFR28_03332	0.69	-1.1
3,840,912	-		PFR28_03332	0.75	-1.9
3,840,912	-		PFR28_03332	0.75	-0.1
3,840,912	-		PFR28_03332	0.75	+0.7
3,840,938	+		PFR28_03332	0.78	-0.9
3,840,943	+		PFR28_03332	0.79	-1.6
3,840,943	+		PFR28_03332	0.79	-0.3
3,840,943	+		PFR28_03332	0.79	-0.5
3,840,944	-		PFR28_03332	0.79	-0.9
3,840,944	-		PFR28_03332	0.79	+2.3
3,840,944	-		PFR28_03332	0.79	-0.7
3,840,944	-		PFR28_03332	0.79	-2.1
3,840,944	-		PFR28_03332	0.79	-0.5
3,841,069	+				-1.6
3,841,098	+				+1.7
3,841,099	-				-0.6
3,841,110	-				+1.7
3,841,110	-				-1.0
3,841,110	-				-0.3
3,841,112	+				-0.2
3,841,112	+				-0.1
3,841,112	+				-2.3
3,841,112	+				+0.3
3,841,112	+				+0.8
3,841,112	+				-1.6
3,841,112	+				-0.2
3,841,112	+				-0.6
3,841,113	-				-0.8
3,841,113	-				-1.1
3,841,113	-				-1.2
3,841,113	-				+0.1
3,841,113	-				-0.6
3,841,113	-				+0.5
3,841,116	+				-3.1
3,841,116	+				-0.9
3,841,116	+				+0.3
3,841,116	+				-0.2
3,841,116	+				-0.3
3,841,116	+				+0.6
3,841,117	-				-0.9
3,841,117	-				-0.4
3,841,117	-				+0.7
3,841,117	-				-0.2
3,841,134	+				-1.3
3,841,135	-				+1.2
3,841,165	+		PFR28_03333	0.10	-0.6
3,841,165	+		PFR28_03333	0.10	-0.8
3,841,202	-		PFR28_03333	0.16	-0.6
3,841,230	+		PFR28_03333	0.20	+0.7