Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4649

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
5,564,730	+				+0.8
5,564,731	-				+0.1
5,564,733	+				-0.5
5,564,837	+				-1.1
5,564,838	-				-0.3
5,564,877	+				+0.7
5,564,877	+				+0.2
5,564,878	-				+0.0
5,564,887	-				-0.1
5,564,942	+				-0.1
5,564,973	-				-0.2
5,564,976	+				-2.6
5,564,976	+				+1.0
5,564,977	-				+0.0
5,565,001	+				+1.1
5,565,002	-				+0.1
5,565,179	+				+0.3
5,565,180	-				+1.8
5,565,180	-				+1.2
5,565,180	-				+1.3
5,565,180	-				+0.8
5,565,188	+				-1.5
5,565,188	+				-0.2
5,565,188	+				-0.5
5,565,188	+				+2.0
5,565,188	+				+0.5
5,565,188	+				-0.6
5,565,188	+				+0.1
5,565,189	-		Echvi_4648	0.10	-0.3
5,565,189	-		Echvi_4648	0.10	+3.1
5,565,189	-		Echvi_4648	0.10	+0.4
5,565,194	+		Echvi_4648	0.11	-0.3
5,565,195	-		Echvi_4648	0.11	-0.5
5,565,195	-		Echvi_4648	0.11	-2.6
5,565,221	+		Echvi_4648	0.16	+0.8
5,565,251	+		Echvi_4648	0.22	-0.2
5,565,252	-		Echvi_4648	0.22	+1.8
5,565,435	-		Echvi_4648	0.55	+0.1
5,565,435	-		Echvi_4648	0.55	+1.0
5,565,446	+		Echvi_4648	0.57	-0.5
5,565,446	+		Echvi_4648	0.57	-0.2
5,565,447	-		Echvi_4648	0.58	-0.2
5,565,468	+		Echvi_4648	0.62	+0.2
5,565,537	+		Echvi_4648	0.74	+0.3
5,565,538	-		Echvi_4648	0.74	-0.4
5,565,538	-		Echvi_4648	0.74	+0.5
5,565,539	+		Echvi_4648	0.75	-1.0
5,565,540	-		Echvi_4648	0.75	-0.2
5,565,549	+		Echvi_4648	0.76	+0.2
5,565,549	+		Echvi_4648	0.76	+0.7
5,565,549	+		Echvi_4648	0.76	-0.7
5,565,550	-		Echvi_4648	0.77	-0.5
5,565,550	-		Echvi_4648	0.77	+0.4
5,565,618	+		Echvi_4648	0.89	-0.0
5,565,618	+		Echvi_4648	0.89	-0.0
5,565,619	-		Echvi_4648	0.89	-1.8
5,565,619	-		Echvi_4648	0.89	+3.2
5,565,619	-		Echvi_4648	0.89	-0.3
5,565,641	+				+0.1
5,565,641	+				-1.1
5,565,641	+				+0.2
5,565,642	-				+0.2
5,565,652	+				-0.3
5,565,653	-				+2.0
5,565,653	-				+0.3
5,565,675	-				-1.1
5,565,680	+				+0.4
5,565,699	+				+2.8
5,565,710	-				+0.6
5,565,710	-				-3.2
5,565,710	-				+0.8
5,565,711	+				-0.5
5,565,711	+				+0.8
5,565,711	+				+0.7
5,565,712	-				+1.8
5,565,717	+				-0.7
5,565,718	-				-1.3
5,565,721	+				+0.5
5,565,730	-				+0.2
5,565,730	-				-2.6
5,565,768	+				+0.8
5,565,813	-				+0.5
5,566,039	+		Echvi_4649	0.18	-0.8
5,566,063	+		Echvi_4649	0.19	-0.5
5,566,212	+		Echvi_4649	0.27	-0.6
5,566,213	-		Echvi_4649	0.27	-1.4
5,566,213	-		Echvi_4649	0.27	+1.0
5,566,285	-		Echvi_4649	0.30	-0.3
5,566,291	-		Echvi_4649	0.31	-1.0
5,566,312	+		Echvi_4649	0.32	+0.5
5,566,312	+		Echvi_4649	0.32	+0.0
5,566,312	+		Echvi_4649	0.32	-0.3
5,566,312	+		Echvi_4649	0.32	-1.2
5,566,312	+		Echvi_4649	0.32	-0.2
5,566,313	-		Echvi_4649	0.32	-0.8
5,566,313	-		Echvi_4649	0.32	-0.8
5,566,419	+		Echvi_4649	0.37	+0.0
5,566,481	+		Echvi_4649	0.41	-0.7
5,566,481	+		Echvi_4649	0.41	-2.0
5,566,484	+		Echvi_4649	0.41	+0.4
5,566,531	+		Echvi_4649	0.43	-1.3
5,566,535	+		Echvi_4649	0.43	-0.5
5,566,616	+		Echvi_4649	0.48	-0.2
5,566,617	-		Echvi_4649	0.48	-0.2
5,566,630	+		Echvi_4649	0.48	-1.0
5,566,630	+		Echvi_4649	0.48	-1.3
5,566,631	-		Echvi_4649	0.48	-0.6
5,566,631	-		Echvi_4649	0.48	+0.3
5,566,632	+		Echvi_4649	0.48	-2.7
5,566,632	+		Echvi_4649	0.48	+0.2
5,566,728	+		Echvi_4649	0.53	-1.1
5,566,729	-		Echvi_4649	0.53	-1.3
5,566,729	-		Echvi_4649	0.53	-1.7
5,566,787	-		Echvi_4649	0.56	+0.2
5,566,792	+		Echvi_4649	0.57	-1.7
5,566,806	-		Echvi_4649	0.57	-0.1
5,567,327	-		Echvi_4649	0.84	+0.4
5,567,465	+				+1.2
5,567,465	+				+0.1
5,567,494	-				-1.0
5,567,595	-				+0.2
5,567,644	-				-1.0
5,567,661	+				-0.9
5,567,665	+				+1.2
5,567,724	-				-2.0
5,567,727	+				+1.7
5,567,727	+				+0.6
5,567,727	+				-0.9
5,567,728	-				-1.5
5,567,728	-				+0.5
5,567,906	+		Echvi_4650	0.34	-0.5
5,567,907	-		Echvi_4650	0.34	-1.2
5,567,949	-		Echvi_4650	0.41	-1.6
5,567,976	-		Echvi_4650	0.45	+1.4
5,567,990	-		Echvi_4650	0.48	-2.3
5,567,992	-		Echvi_4650	0.48	-1.7
5,568,015	-		Echvi_4650	0.52	-0.6
5,568,060	+		Echvi_4650	0.59	-0.7
5,568,142	+		Echvi_4650	0.73	-0.9
5,568,154	+		Echvi_4650	0.75	-0.5
5,568,154	+		Echvi_4650	0.75	-1.3
5,568,154	+		Echvi_4650	0.75	+1.0
5,568,157	+		Echvi_4650	0.75	-0.3
5,568,224	+		Echvi_4650	0.86	+0.7
5,568,282	+				-0.0
5,568,282	+				+0.8
5,568,283	-				-0.1
5,568,324	+				-0.1
5,568,324	+				+0.6
5,568,373	-		Echvi_4651	0.18	-1.0
5,568,373	-		Echvi_4651	0.18	+1.4
5,568,373	-		Echvi_4651	0.18	-0.3
5,568,373	-		Echvi_4651	0.18	-0.3
5,568,373	-		Echvi_4651	0.18	-1.2
5,568,375	-		Echvi_4651	0.18	-0.2
5,568,406	-		Echvi_4651	0.25	+0.2
5,568,496	+		Echvi_4651	0.45	-0.0
5,568,523	+		Echvi_4651	0.51	-0.2
5,568,524	-		Echvi_4651	0.51	+0.5
5,568,524	-		Echvi_4651	0.51	-1.3
5,568,555	+		Echvi_4651	0.58	+0.6
5,568,555	+		Echvi_4651	0.58	+0.1
5,568,605	+		Echvi_4651	0.69	-0.8