Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4534

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
5,419,789	+		Echvi_4532	0.69	-0.2
5,419,789	+		Echvi_4532	0.69	+0.7
5,419,789	+		Echvi_4532	0.69	-0.8
5,419,831	+		Echvi_4532	0.73	+1.9
5,419,831	+		Echvi_4532	0.73	-0.1
5,419,832	-		Echvi_4532	0.73	-1.9
5,419,836	+		Echvi_4532	0.74	-1.5
5,419,836	+		Echvi_4532	0.74	+0.2
5,419,836	+		Echvi_4532	0.74	+0.6
5,419,836	+		Echvi_4532	0.74	+0.2
5,419,836	+		Echvi_4532	0.74	+2.1
5,419,837	-		Echvi_4532	0.74	+0.3
5,419,837	-		Echvi_4532	0.74	+0.6
5,419,926	+		Echvi_4532	0.83	-1.5
5,419,927	-		Echvi_4532	0.83	+0.1
5,419,927	-		Echvi_4532	0.83	+0.2
5,419,928	+		Echvi_4532	0.83	-2.4
5,419,933	-		Echvi_4532	0.84	-2.3
5,419,935	+		Echvi_4532	0.84	+0.2
5,419,935	+		Echvi_4532	0.84	-1.6
5,419,935	+		Echvi_4532	0.84	+0.5
5,419,940	+		Echvi_4532	0.85	-1.2
5,419,941	-		Echvi_4532	0.85	+0.8
5,420,057	-				-2.1
5,420,060	+				-0.0
5,420,061	-				-1.0
5,420,075	-				-0.1
5,420,213	+				+0.2
5,420,214	-				-0.3
5,420,292	+				-0.2
5,420,307	+				+0.0
5,420,312	-				-0.3
5,420,312	-				+0.6
5,420,361	-		Echvi_4533	0.21	-0.5
5,420,361	-		Echvi_4533	0.21	+0.9
5,420,381	+		Echvi_4533	0.30	-0.5
5,420,381	+		Echvi_4533	0.30	-0.3
5,420,381	+		Echvi_4533	0.30	+0.5
5,420,381	+		Echvi_4533	0.30	+0.8
5,420,382	-		Echvi_4533	0.30	-0.5
5,420,382	-		Echvi_4533	0.30	-0.5
5,420,386	-		Echvi_4533	0.32	-0.9
5,420,394	+		Echvi_4533	0.35	-0.7
5,420,506	+		Echvi_4533	0.82	-0.3
5,420,616	+				+1.1
5,420,660	-				-0.7
5,420,660	-				+0.5
5,420,660	-				-0.8
5,420,695	+				-0.3
5,420,696	-				-0.1
5,420,751	+				+1.5
5,420,752	-				+1.4
5,420,752	-				-0.2
5,420,794	+				-0.6
5,420,794	+				-0.2
5,420,794	+				-1.0
5,420,794	+				-0.7
5,420,798	+				-0.2
5,420,823	-		Echvi_4534	0.11	-0.8
5,420,846	+		Echvi_4534	0.15	-0.1
5,420,846	+		Echvi_4534	0.15	-1.8
5,421,068	+		Echvi_4534	0.54	-1.6
5,421,069	-		Echvi_4534	0.54	+1.0
5,421,136	-		Echvi_4534	0.66	+0.6
5,421,136	-		Echvi_4534	0.66	-0.5
5,421,254	+		Echvi_4534	0.86	-2.6
5,421,346	+				-1.1
5,421,347	-				+0.1
5,421,406	-				-0.8
5,421,441	-				-0.6
5,421,471	+				-0.2
5,421,519	+				+0.1
5,421,565	+				+1.4
5,421,565	+				+0.2
5,421,565	+				-0.3
5,421,566	-				+0.5
5,421,569	+				-0.0
5,421,570	-				-0.5
5,421,570	-				-1.1
5,421,610	+				+3.0
5,421,610	+				-0.5
5,421,610	+				-0.3
5,421,610	+				-1.8
5,421,610	+				-1.6
5,421,610	+				-1.0
5,421,611	-				-0.1
5,421,611	-				+0.4
5,421,621	+				-0.2
5,421,621	+				-0.3
5,421,622	-				-1.1
5,421,622	-				+0.5
5,421,652	-				-0.2
5,421,652	-				-2.9
5,421,720	-				-0.7
5,421,724	+				+0.4
5,421,724	+				-0.5
5,421,724	+				-0.4
5,421,724	+				+1.0
5,421,725	-				+1.0
5,421,725	-				+0.2
5,421,770	-				+0.2
5,421,775	+				+0.7
5,421,776	-				+0.4
5,421,803	+				-1.2
5,421,804	-				-0.8
5,421,815	+				+1.8
5,421,816	-				+1.2
5,421,865	+				+0.5
5,421,865	+				-0.8
5,422,040	-		Echvi_4535	0.12	-0.0
5,422,040	-		Echvi_4535	0.12	+1.2
5,422,040	-		Echvi_4535	0.12	+0.0
5,422,093	-		Echvi_4535	0.15	-1.6
5,422,093	-		Echvi_4535	0.15	+0.1
5,422,095	-		Echvi_4535	0.15	-1.3
5,422,157	+		Echvi_4535	0.19	+0.3
5,422,161	-		Echvi_4535	0.19	-0.7
5,422,161	-		Echvi_4535	0.19	-2.5
5,422,197	-		Echvi_4535	0.22	-1.1
5,422,199	+		Echvi_4535	0.22	-1.5
5,422,200	-		Echvi_4535	0.22	+0.0