Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4420

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
5,284,453	+		Echvi_4419	0.26	+0.0
5,284,453	+		Echvi_4419	0.26	+2.1
5,284,453	+		Echvi_4419	0.26	+0.4
5,284,454	-		Echvi_4419	0.26	+0.4
5,284,454	-		Echvi_4419	0.26	-2.0
5,284,454	-		Echvi_4419	0.26	-1.2
5,284,454	-		Echvi_4419	0.26	+1.8
5,284,454	-		Echvi_4419	0.26	-0.5
5,284,454	-		Echvi_4419	0.26	+1.3
5,284,455	+		Echvi_4419	0.26	+0.8
5,284,456	-		Echvi_4419	0.26	-1.1
5,284,464	+		Echvi_4419	0.27	+0.6
5,284,474	+		Echvi_4419	0.28	-0.4
5,284,483	+		Echvi_4419	0.29	-0.9
5,284,483	+		Echvi_4419	0.29	+1.8
5,284,519	+		Echvi_4419	0.32	-1.8
5,284,519	+		Echvi_4419	0.32	-1.8
5,284,519	+		Echvi_4419	0.32	-0.7
5,284,611	+		Echvi_4419	0.41	+1.2
5,284,631	-		Echvi_4419	0.42	-1.5
5,284,702	+		Echvi_4419	0.49	+0.9
5,284,703	-		Echvi_4419	0.49	+0.3
5,285,005	+		Echvi_4419	0.78	-0.1
5,285,005	+		Echvi_4419	0.78	+0.7
5,285,006	-		Echvi_4419	0.78	+1.5
5,285,006	-		Echvi_4419	0.78	-0.0
5,285,006	-		Echvi_4419	0.78	+0.5
5,285,006	-		Echvi_4419	0.78	+0.3
5,285,006	-		Echvi_4419	0.78	+0.4
5,285,006	-		Echvi_4419	0.78	+0.9
5,285,006	-		Echvi_4419	0.78	+0.6
5,285,007	+		Echvi_4419	0.78	+0.8
5,285,007	+		Echvi_4419	0.78	-0.0
5,285,008	-		Echvi_4419	0.78	+1.1
5,285,008	-		Echvi_4419	0.78	-0.8
5,285,008	-		Echvi_4419	0.78	-0.2
5,285,008	-		Echvi_4419	0.78	-0.2
5,285,113	-		Echvi_4419	0.88	+0.6
5,285,119	+		Echvi_4419	0.88	+1.4
5,285,120	-		Echvi_4419	0.89	+1.8
5,285,183	-				-0.5
5,285,281	-				-0.8
5,285,298	-				+0.3
5,285,298	-				-0.3
5,285,320	+				-2.6
5,285,321	-				+3.1
5,285,321	-				-1.0
5,285,353	-				+0.5
5,285,474	+		Echvi_4420	0.22	-1.0
5,285,474	+		Echvi_4420	0.22	-0.3
5,285,475	-		Echvi_4420	0.22	+0.2
5,285,475	-		Echvi_4420	0.22	-0.3
5,285,583	+		Echvi_4420	0.38	+0.1
5,285,583	+		Echvi_4420	0.38	+1.8
5,285,583	+		Echvi_4420	0.38	-0.8
5,285,583	+		Echvi_4420	0.38	-1.1
5,285,588	+		Echvi_4420	0.39	-0.7
5,285,589	-		Echvi_4420	0.39	-0.8
5,285,700	+		Echvi_4420	0.56	+0.2
5,285,728	+		Echvi_4420	0.60	-1.7
5,285,753	-		Echvi_4420	0.64	+1.1
5,285,753	-		Echvi_4420	0.64	-0.3
5,285,857	-		Echvi_4420	0.79	-0.8
5,285,971	-				+0.4
5,285,971	-				+0.2
5,286,031	+				-0.9
5,286,073	+		Echvi_4421	0.21	+1.6
5,286,117	+		Echvi_4421	0.35	-0.2
5,286,121	+		Echvi_4421	0.36	+0.4
5,286,121	+		Echvi_4421	0.36	+0.0
5,286,121	+		Echvi_4421	0.36	+0.2
5,286,122	-		Echvi_4421	0.36	-2.5
5,286,122	-		Echvi_4421	0.36	-1.4
5,286,207	+		Echvi_4421	0.63	-1.8
5,286,208	-		Echvi_4421	0.63	-0.8
5,286,208	-		Echvi_4421	0.63	+0.5
5,286,247	+		Echvi_4421	0.76	+0.1
5,286,247	+		Echvi_4421	0.76	+0.8
5,286,248	-		Echvi_4421	0.76	-0.4
5,286,252	+		Echvi_4421	0.77	+0.8
5,286,322	+				+0.3
5,286,322	+				-3.2
5,286,322	+				+0.1
5,286,322	+				+1.2
5,286,322	+				-0.2
5,286,322	+				+0.3
5,286,322	+				-2.1
5,286,323	-				-0.6
5,286,323	-				-0.5
5,286,323	-				-0.3
5,286,323	-				-0.7
5,286,323	-				-1.7
5,286,323	-				-1.3
5,286,324	+				+0.0
5,286,325	-				-0.9
5,286,325	-				+1.0
5,286,325	-				-1.0
5,286,325	-				+0.5
5,286,325	-				+1.2
5,286,502	-				-1.0
5,286,550	-				+1.0
5,286,551	+				-1.6
5,286,551	+				+1.1
5,286,552	-				+0.6
5,286,555	+				+0.6
5,286,555	+				-0.7
5,286,603	+				+0.4
5,286,603	+				-0.5
5,286,691	+				+0.2
5,286,715	+				-0.2
5,286,715	+				-1.1
5,286,715	+				+0.2
5,286,754	+				+1.8
5,286,754	+				+0.8
5,286,766	+		Echvi_4422	0.10	+0.6
5,286,850	+		Echvi_4422	0.15	-0.4
5,286,922	+		Echvi_4422	0.19	+1.3
5,286,923	-		Echvi_4422	0.19	+0.4
5,286,967	-		Echvi_4422	0.21	-0.5