Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4300

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
5,139,863	+				-1.4
5,139,864	-				-0.3
5,139,888	+				-0.4
5,139,889	-				+1.3
5,139,889	-				-0.5
5,139,889	-				-0.8
5,139,889	-				-0.3
5,139,889	-				+1.6
5,139,890	+				-1.0
5,139,896	+				-0.1
5,139,896	+				-1.4
5,139,897	-				-0.0
5,139,897	-				-0.6
5,139,899	+				+0.6
5,139,900	-				-0.6
5,139,902	-				-0.3
5,139,917	+				+1.3
5,139,949	+		Echvi_4298	0.15	-1.1
5,139,967	+		Echvi_4298	0.20	-0.3
5,139,971	-		Echvi_4298	0.21	+1.3
5,140,032	+		Echvi_4298	0.35	+0.3
5,140,055	+		Echvi_4298	0.41	+0.2
5,140,055	+		Echvi_4298	0.41	+0.8
5,140,055	+		Echvi_4298	0.41	-1.1
5,140,056	-		Echvi_4298	0.41	-0.4
5,140,098	+		Echvi_4298	0.51	+0.9
5,140,098	+		Echvi_4298	0.51	-1.6
5,140,098	+		Echvi_4298	0.51	+0.3
5,140,112	+		Echvi_4298	0.54	+1.4
5,140,167	-		Echvi_4298	0.68	+0.4
5,140,208	+		Echvi_4298	0.77	+0.2
5,140,228	-		Echvi_4298	0.82	-2.0
5,140,234	-		Echvi_4298	0.84	-0.4
5,140,234	-		Echvi_4298	0.84	+0.1
5,140,234	-		Echvi_4298	0.84	-0.0
5,140,257	+		Echvi_4298	0.89	-1.3
5,140,258	-		Echvi_4298	0.89	+0.7
5,140,258	-		Echvi_4298	0.89	-0.3
5,140,304	+				+0.5
5,140,305	-				-2.7
5,140,305	-				+0.7
5,140,316	-				-1.1
5,140,370	+		Echvi_4299	0.12	-1.8
5,140,370	+		Echvi_4299	0.12	-0.8
5,140,371	-		Echvi_4299	0.12	-0.7
5,140,371	-		Echvi_4299	0.12	+0.7
5,140,372	+		Echvi_4299	0.12	+0.4
5,140,373	-		Echvi_4299	0.13	+0.2
5,140,417	+		Echvi_4299	0.22	+0.5
5,140,437	+		Echvi_4299	0.26	-1.2
5,140,470	+		Echvi_4299	0.33	+1.1
5,140,471	-		Echvi_4299	0.34	-0.8
5,140,515	-		Echvi_4299	0.43	-1.1
5,140,537	+		Echvi_4299	0.48	-0.6
5,140,554	-		Echvi_4299	0.51	+0.2
5,140,653	+		Echvi_4299	0.72	+2.0
5,140,653	+		Echvi_4299	0.72	-0.6
5,140,653	+		Echvi_4299	0.72	-1.0
5,140,674	+		Echvi_4299	0.77	+0.6
5,140,674	+		Echvi_4299	0.77	+0.4
5,140,686	+		Echvi_4299	0.79	+0.5
5,140,686	+		Echvi_4299	0.79	-0.6
5,140,735	-				-0.2
5,140,756	-				+1.4
5,140,801	+				+0.0
5,140,803	+				+0.9
5,140,839	+				-0.2
5,140,840	-				-0.4
5,140,849	+				+0.2
5,140,849	+				-0.8
5,140,849	+				+0.9
5,140,849	+				-0.4
5,140,850	-				+0.0
5,140,876	+				+0.5
5,140,877	-				+0.3
5,140,878	+				+0.8
5,140,886	+				+0.4
5,140,907	+		Echvi_4300	0.12	+1.0
5,140,907	+		Echvi_4300	0.12	-0.5
5,140,985	+		Echvi_4300	0.26	-0.8
5,141,042	+		Echvi_4300	0.37	-0.8
5,141,042	+		Echvi_4300	0.37	+0.3
5,141,042	+		Echvi_4300	0.37	+0.9
5,141,042	+		Echvi_4300	0.37	-1.7
5,141,043	-		Echvi_4300	0.37	+0.6
5,141,043	-		Echvi_4300	0.37	+0.3
5,141,055	+		Echvi_4300	0.39	-1.0
5,141,055	+		Echvi_4300	0.39	+1.3
5,141,055	+		Echvi_4300	0.39	+0.7
5,141,056	-		Echvi_4300	0.39	+0.4
5,141,067	-		Echvi_4300	0.41	+0.2
5,141,131	+		Echvi_4300	0.53	+1.1
5,141,135	+		Echvi_4300	0.54	-1.6
5,141,136	-		Echvi_4300	0.54	-1.3
5,141,136	-		Echvi_4300	0.54	-0.1
5,141,273	-		Echvi_4300	0.79	-0.8
5,141,279	+		Echvi_4300	0.80	-2.3
5,141,280	-		Echvi_4300	0.80	+0.2
5,141,330	+		Echvi_4300	0.89	+1.6
5,141,330	+		Echvi_4300	0.89	+1.2
5,141,334	+		Echvi_4300	0.90	+0.5
5,141,334	+		Echvi_4300	0.90	+0.7
5,141,334	+		Echvi_4300	0.90	+0.9
5,141,335	-				-1.1
5,141,335	-				+1.2
5,141,371	+				-2.0
5,141,371	+				+0.9
5,141,371	+				-1.1
5,141,372	-				+0.6
5,141,372	-				-2.2
5,141,372	-				+1.2
5,141,372	-				-0.2
5,141,374	-				+0.1
5,141,374	-				-0.1
5,141,375	+				+0.0
5,141,375	+				+0.2
5,141,375	+				+2.5
5,141,375	+				-0.7
5,141,375	+				-0.2
5,141,375	+				-2.0
5,141,375	+				+0.2
5,141,375	+				+1.0
5,141,375	+				+0.6
5,141,376	-				+0.1
5,141,376	-				+0.7
5,141,376	-				+0.7
5,141,376	-				-0.4
5,141,376	-				+0.8
5,141,389	+				-0.1
5,141,389	+				+0.4
5,141,408	-				+1.0
5,141,416	+				+0.2
5,141,417	-				+0.4
5,141,433	+				-1.6
5,141,439	+		Echvi_4301	0.11	-0.6
5,141,440	-		Echvi_4301	0.11	-2.0
5,141,440	-		Echvi_4301	0.11	+0.2
5,141,473	-		Echvi_4301	0.17	+2.0
5,141,478	+		Echvi_4301	0.18	-2.3
5,141,501	-		Echvi_4301	0.23	+1.1
5,141,502	+		Echvi_4301	0.23	+0.4
5,141,503	-		Echvi_4301	0.23	+0.0
5,141,503	-		Echvi_4301	0.23	-0.8
5,141,503	-		Echvi_4301	0.23	-1.5
5,141,527	-		Echvi_4301	0.28	+0.5
5,141,563	+		Echvi_4301	0.36	+1.0
5,141,616	-		Echvi_4301	0.46	-0.6
5,141,617	+		Echvi_4301	0.46	-0.6
5,141,686	+		Echvi_4301	0.60	-0.3
5,141,784	+		Echvi_4301	0.80	-0.6
5,141,784	+		Echvi_4301	0.80	+0.4
5,141,784	+		Echvi_4301	0.80	-1.8
5,141,785	-		Echvi_4301	0.80	-0.7
5,141,841	+				-0.0
5,141,841	+				-0.9
5,141,841	+				+1.2
5,141,903	-				+1.2
5,141,903	-				+0.9
5,141,925	+				-0.1
5,141,930	+				+0.4
5,141,931	-				-0.1
5,141,931	-				+1.6
5,141,937	+				+0.1
5,141,958	-				+0.2
5,142,042	+		Echvi_4302	0.13	-0.3
5,142,087	-		Echvi_4302	0.17	+0.3
5,142,114	-		Echvi_4302	0.20	+2.2
5,142,132	-		Echvi_4302	0.22	-0.4
5,142,218	+		Echvi_4302	0.30	-0.1
5,142,218	+		Echvi_4302	0.30	+0.3
5,142,218	+		Echvi_4302	0.30	-1.1
5,142,218	+		Echvi_4302	0.30	-0.6
5,142,225	+		Echvi_4302	0.30	+0.7
5,142,226	-		Echvi_4302	0.30	+0.2
5,142,233	-		Echvi_4302	0.31	-0.5
5,142,301	+		Echvi_4302	0.37	+0.4
5,142,306	-		Echvi_4302	0.38	+0.4