Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4243

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
5,086,963	-				+1.0
5,086,985	+				-0.1
5,086,986	-				+2.5
5,086,986	-				+0.6
5,087,001	-				+0.1
5,087,028	-				-2.4
5,087,032	+				+0.9
5,087,062	+				+1.3
5,087,091	-				+0.0
5,087,096	-				+1.7
5,087,140	-				-0.4
5,087,157	-		Echvi_4242	0.11	-0.3
5,087,162	-		Echvi_4242	0.12	-1.2
5,087,526	-				-1.9
5,087,587	-				+0.3
5,087,587	-				-0.5
5,087,662	+				-0.0
5,087,662	+				-1.5
5,087,663	-				-0.0
5,087,663	-				+0.5
5,087,762	+				-0.2
5,087,763	-				-0.4
5,087,826	+				+0.6
5,087,826	+				+0.9
5,087,827	-				+0.3
5,087,827	-				-0.0
5,087,827	-				-0.8
5,087,827	-				-0.7
5,087,832	-				+0.2
5,087,832	-				-0.3
5,087,832	-				+0.2
5,087,834	-				+0.4
5,087,834	-				-0.5
5,087,839	-				-1.3
5,087,855	+				+1.1
5,087,857	+				-0.6
5,087,894	-				+1.0
5,087,930	+				+2.5
5,087,931	-				-0.5
5,087,931	-				-0.4
5,087,931	-				-0.7
5,087,965	+				-0.3
5,087,966	-				-2.0
5,087,994	+				+0.7
5,087,994	+				+1.7
5,088,038	-				-0.1
5,088,039	+				+0.2
5,088,040	-				+1.7
5,088,040	-				-0.9
5,088,139	+		Echvi_4243	0.18	-0.1
5,088,140	-		Echvi_4243	0.18	+0.3
5,088,151	+		Echvi_4243	0.19	+1.2
5,088,193	+		Echvi_4243	0.23	+0.2
5,088,193	+		Echvi_4243	0.23	-1.1
5,088,194	-		Echvi_4243	0.23	+0.1
5,088,194	-		Echvi_4243	0.23	-0.4
5,088,242	+		Echvi_4243	0.27	+0.1
5,088,351	-		Echvi_4243	0.36	-0.2
5,088,351	-		Echvi_4243	0.36	-0.1
5,088,528	+		Echvi_4243	0.52	+1.1
5,088,529	-		Echvi_4243	0.52	+0.4
5,088,577	-		Echvi_4243	0.56	+1.0
5,088,577	-		Echvi_4243	0.56	+0.5
5,088,586	+		Echvi_4243	0.57	+1.0
5,088,589	+		Echvi_4243	0.57	-2.4
5,088,643	-		Echvi_4243	0.62	+1.4
5,088,665	+		Echvi_4243	0.63	+1.0
5,088,665	+		Echvi_4243	0.63	+1.3
5,088,665	+		Echvi_4243	0.63	-2.8
5,088,665	+		Echvi_4243	0.63	+0.4
5,088,665	+		Echvi_4243	0.63	+1.7
5,088,666	-		Echvi_4243	0.63	+0.3
5,088,666	-		Echvi_4243	0.63	+0.1
5,088,819	+		Echvi_4243	0.77	+1.7
5,088,869	-		Echvi_4243	0.81	-1.9
5,088,895	+		Echvi_4243	0.83	-1.0
5,088,907	+		Echvi_4243	0.84	-0.1
5,089,085	-				+0.8
5,089,098	+				+0.4
5,089,102	+				+1.7
5,089,105	+				-0.4
5,089,197	+				+1.7
5,089,197	+				-1.4
5,089,255	-				+0.1
5,089,487	+				-0.1
5,089,508	+				-0.4
5,089,509	-				-1.2
5,089,509	-				+0.9
5,089,509	-				-0.2
5,089,509	-				+0.7
5,089,580	-		Echvi_4244	0.17	+0.7
5,089,595	+		Echvi_4244	0.22	-1.1
5,089,596	-		Echvi_4244	0.22	-2.2
5,089,596	-		Echvi_4244	0.22	+1.0
5,089,648	-		Echvi_4244	0.38	+0.9
5,089,654	+		Echvi_4244	0.40	-0.4
5,089,688	+		Echvi_4244	0.50	+0.7
5,089,689	-		Echvi_4244	0.50	-0.9
5,089,706	+		Echvi_4244	0.55	-0.9
5,089,706	+		Echvi_4244	0.55	-1.0
5,089,723	+		Echvi_4244	0.60	+1.0
5,089,724	-		Echvi_4244	0.61	-0.1
5,089,724	-		Echvi_4244	0.61	+0.1
5,089,757	+		Echvi_4244	0.71	-0.1
5,089,764	+		Echvi_4244	0.73	-0.1
5,089,863	+				-0.7
5,089,864	-				+0.3
5,089,881	+				-0.6
5,089,882	-				-0.7
5,089,884	-				+0.7
5,089,980	-				+0.2
5,090,024	+				+0.6
5,090,024	+				-0.8
5,090,063	+				-0.3
5,090,077	-				-0.2