Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4220

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
5,056,880	-		Echvi_4219	0.85	-0.5
5,056,880	-		Echvi_4219	0.85	+0.3
5,056,880	-		Echvi_4219	0.85	+0.9
5,056,976	+		Echvi_4219	0.88	+2.4
5,056,990	-		Echvi_4219	0.88	-1.1
5,056,990	-		Echvi_4219	0.88	-2.3
5,056,990	-		Echvi_4219	0.88	-1.3
5,057,044	+				+1.6
5,057,045	-				+1.1
5,057,078	+				-2.5
5,057,180	+				+0.6
5,057,180	+				+0.1
5,057,189	+				-1.7
5,057,218	-				+0.1
5,057,236	+				+1.2
5,057,298	+				+1.5
5,057,398	+				+0.6
5,057,570	+				+1.7
5,057,573	+				+0.2
5,057,643	+				+0.3
5,057,644	-				-0.3
5,057,797	+				+1.1
5,057,893	-		Echvi_4220	0.14	+1.1
5,057,896	+		Echvi_4220	0.14	-0.9
5,057,926	-		Echvi_4220	0.16	+0.3
5,058,016	-		Echvi_4220	0.24	+0.0
5,058,075	+		Echvi_4220	0.28	-0.0
5,058,247	+		Echvi_4220	0.42	-1.6
5,058,263	+		Echvi_4220	0.43	+1.2
5,058,340	+		Echvi_4220	0.50	-2.7
5,058,340	+		Echvi_4220	0.50	+0.7
5,058,340	+		Echvi_4220	0.50	-0.4
5,058,340	+		Echvi_4220	0.50	-0.3
5,058,346	+		Echvi_4220	0.50	+0.8
5,058,431	+		Echvi_4220	0.57	+0.1
5,058,431	+		Echvi_4220	0.57	-0.7
5,058,431	+		Echvi_4220	0.57	+0.3
5,058,432	-		Echvi_4220	0.57	-0.3
5,058,432	-		Echvi_4220	0.57	+0.1
5,058,442	+		Echvi_4220	0.58	-0.0
5,058,484	-		Echvi_4220	0.61	+1.7
5,058,619	+		Echvi_4220	0.72	+1.3
5,058,619	+		Echvi_4220	0.72	+1.4
5,058,619	+		Echvi_4220	0.72	+0.9
5,058,620	-		Echvi_4220	0.72	-1.0
5,058,620	-		Echvi_4220	0.72	+0.4
5,058,673	+		Echvi_4220	0.76	+0.9
5,058,673	+		Echvi_4220	0.76	-1.1
5,058,674	-		Echvi_4220	0.76	-0.3
5,058,781	+		Echvi_4220	0.85	+0.7
5,058,819	+		Echvi_4220	0.88	+1.3
5,058,874	-				+0.6
5,058,874	-				+2.1
5,058,892	-				-0.4
5,058,892	-				+1.6
5,058,892	-				+0.8
5,058,926	-				-0.2
5,058,926	-				+0.9
5,058,926	-				+1.7
5,058,926	-				+1.6
5,059,005	-				-2.0
5,059,031	-				+0.1
5,059,092	+				-0.9
5,059,220	+		Echvi_4221	0.32	-0.7
5,059,221	-		Echvi_4221	0.33	-0.9
5,059,242	+		Echvi_4221	0.38	+0.2
5,059,243	-		Echvi_4221	0.38	+0.9
5,059,263	-		Echvi_4221	0.44	-0.7
5,059,300	-		Echvi_4221	0.54	+1.5
5,059,333	+		Echvi_4221	0.62	+2.3
5,059,333	+		Echvi_4221	0.62	+0.9
5,059,421	+		Echvi_4221	0.86	-1.4
5,059,432	+		Echvi_4221	0.89	-1.5
5,059,479	+				+0.9
5,059,581	-				+0.1
5,059,627	+				+0.1
5,059,628	-				-0.2
5,059,628	-				+0.3
5,059,628	-				-0.3
5,059,672	-				-0.1
5,059,672	-				-0.1
5,059,684	+				-0.7
5,059,684	+				-0.7
5,059,823	+				+0.3
5,059,824	-				-0.9
5,059,824	-				+0.5
5,059,825	+				+0.5
5,059,833	-				+0.1
5,059,906	+				-0.2
5,059,906	+				-1.7
5,059,907	-				+2.0
5,059,924	+				+1.0