Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4110

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
4,922,174	+		Echvi_4108	0.23	+0.4
4,922,289	+		Echvi_4108	0.38	-1.1
4,922,289	+		Echvi_4108	0.38	-0.1
4,922,289	+		Echvi_4108	0.38	-1.4
4,922,290	-		Echvi_4108	0.38	-0.3
4,922,293	-		Echvi_4108	0.38	+0.3
4,922,369	+		Echvi_4108	0.48	+0.6
4,922,401	+		Echvi_4108	0.52	+0.1
4,922,401	+		Echvi_4108	0.52	+1.2
4,922,523	+		Echvi_4108	0.67	-0.8
4,922,553	+		Echvi_4108	0.71	+1.2
4,922,554	-		Echvi_4108	0.71	-0.3
4,922,556	-		Echvi_4108	0.72	+0.9
4,922,618	+		Echvi_4108	0.79	+0.6
4,922,619	-		Echvi_4108	0.80	+0.5
4,922,619	-		Echvi_4108	0.80	-0.5
4,922,619	-		Echvi_4108	0.80	+1.3
4,922,622	+		Echvi_4108	0.80	+0.4
4,922,623	-		Echvi_4108	0.80	-0.9
4,922,632	-		Echvi_4108	0.81	-1.0
4,922,650	-		Echvi_4108	0.83	-0.1
4,922,828	-		Echvi_4109	0.14	+0.5
4,922,841	-		Echvi_4109	0.18	-0.8
4,922,846	-		Echvi_4109	0.19	-0.9
4,922,858	+		Echvi_4109	0.22	-0.5
4,922,858	+		Echvi_4109	0.22	-0.6
4,922,859	-		Echvi_4109	0.23	-0.5
4,922,905	+		Echvi_4109	0.35	+2.0
4,922,906	-		Echvi_4109	0.36	-1.0
4,922,909	-		Echvi_4109	0.36	-0.0
4,922,912	+		Echvi_4109	0.37	+0.1
4,922,912	+		Echvi_4109	0.37	-0.7
4,922,913	-		Echvi_4109	0.37	+0.0
4,922,913	-		Echvi_4109	0.37	-0.6
4,922,913	-		Echvi_4109	0.37	-1.3
4,922,913	-		Echvi_4109	0.37	-2.3
4,922,957	+		Echvi_4109	0.50	-2.4
4,922,957	+		Echvi_4109	0.50	+0.7
4,923,007	+		Echvi_4109	0.63	-0.3
4,923,040	+		Echvi_4109	0.72	+1.4
4,923,040	+		Echvi_4109	0.72	-0.7
4,923,064	+		Echvi_4109	0.79	-1.3
4,923,064	+		Echvi_4109	0.79	-1.9
4,923,066	+		Echvi_4109	0.80	-0.8
4,923,083	-		Echvi_4109	0.84	-2.5
4,923,120	-				+0.1
4,923,120	-				+1.6
4,923,132	-				-3.4
4,923,132	-				-1.5
4,923,156	-				-0.2
4,923,158	-				-0.4
4,923,158	-				-1.1
4,923,158	-				-0.4
4,923,162	+				-0.9
4,923,170	+				-0.1
4,923,180	+				-0.2
4,923,222	+				-0.2
4,923,222	+				+0.5
4,923,222	+				-0.7
4,923,222	+				-0.8
4,923,222	+				+0.9
4,923,298	+				-1.3
4,923,299	-				-2.8
4,923,449	-		Echvi_4110	0.11	-0.0
4,923,463	-		Echvi_4110	0.12	-0.9
4,923,508	+		Echvi_4110	0.14	+0.1
4,923,509	-		Echvi_4110	0.14	-1.1
4,923,547	+		Echvi_4110	0.15	-0.6
4,923,684	+		Echvi_4110	0.21	-0.6
4,923,708	+		Echvi_4110	0.22	-0.8
4,923,765	+		Echvi_4110	0.24	-1.3
4,923,766	-		Echvi_4110	0.24	-1.8
4,923,768	+		Echvi_4110	0.24	+0.9
4,923,781	+		Echvi_4110	0.25	+0.3
4,923,822	+		Echvi_4110	0.26	+3.7
4,923,822	+		Echvi_4110	0.26	+0.4
4,923,931	+		Echvi_4110	0.31	+0.1
4,923,931	+		Echvi_4110	0.31	-0.7
4,923,931	+		Echvi_4110	0.31	-0.6
4,923,934	-		Echvi_4110	0.31	-0.3
4,924,043	-		Echvi_4110	0.35	+0.5
4,924,197	+		Echvi_4110	0.41	+0.2
4,924,260	+		Echvi_4110	0.44	-0.5
4,924,260	+		Echvi_4110	0.44	+1.0
4,924,261	-		Echvi_4110	0.44	-1.3
4,924,353	-		Echvi_4110	0.47	-1.0
4,924,437	+		Echvi_4110	0.51	+0.2
4,924,479	+		Echvi_4110	0.52	+1.7
4,924,523	-		Echvi_4110	0.54	+1.6
4,924,523	-		Echvi_4110	0.54	+0.3
4,924,599	+		Echvi_4110	0.57	+1.1
4,924,599	+		Echvi_4110	0.57	-0.0
4,924,600	-		Echvi_4110	0.57	+0.8
4,924,600	-		Echvi_4110	0.57	-0.1
4,924,600	-		Echvi_4110	0.57	-1.0
4,924,600	-		Echvi_4110	0.57	+1.2
4,924,630	+		Echvi_4110	0.59	+0.9
4,924,631	-		Echvi_4110	0.59	+1.6
4,924,631	-		Echvi_4110	0.59	+0.7
4,924,693	+		Echvi_4110	0.61	+0.7
4,924,693	+		Echvi_4110	0.61	+0.2
4,924,693	+		Echvi_4110	0.61	-1.8
4,924,693	+		Echvi_4110	0.61	+0.3
4,924,693	+		Echvi_4110	0.61	-0.3
4,924,694	-		Echvi_4110	0.61	+0.5
4,924,694	-		Echvi_4110	0.61	+0.3
4,924,694	-		Echvi_4110	0.61	-0.3
4,924,702	+		Echvi_4110	0.61	-0.7
4,924,702	+		Echvi_4110	0.61	-0.4
4,924,703	-		Echvi_4110	0.61	+3.0
4,924,703	-		Echvi_4110	0.61	+0.5
4,924,704	+		Echvi_4110	0.61	+0.0
4,924,705	-		Echvi_4110	0.62	+0.3
4,924,708	+		Echvi_4110	0.62	+0.3
4,924,709	-		Echvi_4110	0.62	+0.0
4,924,709	-		Echvi_4110	0.62	-0.9
4,924,802	+		Echvi_4110	0.65	-0.5
4,924,802	+		Echvi_4110	0.65	-0.6
4,924,843	+		Echvi_4110	0.67	-1.6
4,924,873	-		Echvi_4110	0.68	-0.6
4,924,873	-		Echvi_4110	0.68	-2.0
4,924,882	+		Echvi_4110	0.69	+2.0
4,924,882	+		Echvi_4110	0.69	-0.6
4,924,883	-		Echvi_4110	0.69	-0.1
4,924,910	-		Echvi_4110	0.70	+0.7
4,924,976	+		Echvi_4110	0.72	+0.8
4,924,977	-		Echvi_4110	0.72	+1.7
4,924,988	+		Echvi_4110	0.73	+0.3
4,924,989	-		Echvi_4110	0.73	-0.2
4,924,993	+		Echvi_4110	0.73	+0.8
4,924,993	+		Echvi_4110	0.73	-0.4
4,924,993	+		Echvi_4110	0.73	+0.7
4,924,994	-		Echvi_4110	0.73	-1.5
4,924,996	+		Echvi_4110	0.73	+1.4
4,924,996	+		Echvi_4110	0.73	+0.8
4,924,996	+		Echvi_4110	0.73	-0.0
4,925,028	-		Echvi_4110	0.74	+1.2
4,925,070	+		Echvi_4110	0.76	+0.1
4,925,195	-		Echvi_4110	0.81	-0.5
4,925,213	-		Echvi_4110	0.82	+0.1
4,925,221	-		Echvi_4110	0.82	+0.4
4,925,251	+		Echvi_4110	0.83	-0.4
4,925,401	+		Echvi_4110	0.89	-1.0
4,925,402	-		Echvi_4110	0.89	-0.9
4,925,408	-		Echvi_4110	0.90	+0.1
4,925,416	-				-0.5
4,925,498	+				-0.4
4,925,498	+				+0.1
4,925,509	+				+0.1
4,925,592	+				-0.3
4,925,593	-				-1.0
4,925,597	-				-0.9
4,925,647	+				+0.1
4,925,648	-				-0.3
4,925,705	+				+1.1
4,925,750	+				-1.1
4,925,757	+				+1.0
4,925,757	+				+1.6
4,925,758	-				-3.6
4,925,776	+				-1.3
4,925,782	+				-2.0
4,925,790	-				+1.4
4,925,790	-				+0.3
4,925,793	+				-0.3
4,925,809	+		Echvi_4111	0.11	-1.4
4,925,809	+		Echvi_4111	0.11	+0.6
4,925,810	-		Echvi_4111	0.11	-0.6
4,925,814	+		Echvi_4111	0.12	+1.0
4,925,814	+		Echvi_4111	0.12	+0.7
4,925,815	-		Echvi_4111	0.12	+0.3
4,925,837	+		Echvi_4111	0.15	+0.5
4,925,838	-		Echvi_4111	0.15	-0.5
4,925,838	-		Echvi_4111	0.15	+0.3
4,925,850	+		Echvi_4111	0.16	+0.5
4,925,863	+		Echvi_4111	0.18	-0.8
4,925,864	-		Echvi_4111	0.18	+1.0
4,925,919	-		Echvi_4111	0.25	-0.2
4,925,941	-		Echvi_4111	0.28	-0.4
4,925,987	-		Echvi_4111	0.33	-1.7
4,926,032	-		Echvi_4111	0.39	-0.1
4,926,051	-		Echvi_4111	0.41	-0.1
4,926,051	-		Echvi_4111	0.41	-0.5
4,926,051	-		Echvi_4111	0.41	+1.2
4,926,054	+		Echvi_4111	0.42	-0.4
4,926,055	-		Echvi_4111	0.42	-1.0
4,926,055	-		Echvi_4111	0.42	+0.7
4,926,055	-		Echvi_4111	0.42	-1.9
4,926,086	+		Echvi_4111	0.46	+1.0
4,926,164	+		Echvi_4111	0.55	+1.1
4,926,164	+		Echvi_4111	0.55	-1.1
4,926,164	+		Echvi_4111	0.55	+0.1
4,926,178	+		Echvi_4111	0.57	-1.8
4,926,250	+		Echvi_4111	0.66	-1.9
4,926,250	+		Echvi_4111	0.66	+0.8
4,926,250	+		Echvi_4111	0.66	+0.3
4,926,250	+		Echvi_4111	0.66	+0.3
4,926,251	-		Echvi_4111	0.66	+0.7
4,926,251	-		Echvi_4111	0.66	-0.8
4,926,296	-		Echvi_4111	0.71	-0.2
4,926,313	+		Echvi_4111	0.74	+0.1
4,926,313	+		Echvi_4111	0.74	-0.0
4,926,313	+		Echvi_4111	0.74	+0.0
4,926,316	+		Echvi_4111	0.74	-0.3
4,926,316	+		Echvi_4111	0.74	+0.5
4,926,326	+		Echvi_4111	0.75	+0.9
4,926,326	+		Echvi_4111	0.75	-1.5
4,926,327	-		Echvi_4111	0.75	+0.4
4,926,446	-				+0.5
4,926,446	-				-0.1
4,926,446	-				-1.0
4,926,529	+				-0.9
4,926,530	-				-0.4
4,926,532	+				+0.8
4,926,532	+				-1.3
4,926,533	-				-0.4
4,926,567	+				-1.2
4,926,644	+		Echvi_4112	0.26	+0.2