Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3942

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
4,720,450	+				-1.3
4,720,451	-				+0.4
4,720,507	-		Echvi_3941	0.15	-1.0
4,720,598	-		Echvi_3941	0.24	-0.1
4,720,611	+		Echvi_3941	0.25	-1.7
4,720,612	-		Echvi_3941	0.25	+0.4
4,720,612	-		Echvi_3941	0.25	+0.1
4,720,614	+		Echvi_3941	0.26	+0.2
4,720,614	+		Echvi_3941	0.26	-0.3
4,720,614	+		Echvi_3941	0.26	-0.8
4,720,617	+		Echvi_3941	0.26	-0.4
4,720,618	-		Echvi_3941	0.26	-0.9
4,720,624	+		Echvi_3941	0.27	-0.0
4,720,694	-		Echvi_3941	0.33	-0.0
4,720,711	-		Echvi_3941	0.35	-0.2
4,720,741	+		Echvi_3941	0.38	+1.2
4,720,741	+		Echvi_3941	0.38	-0.9
4,720,741	+		Echvi_3941	0.38	-0.8
4,720,741	+		Echvi_3941	0.38	+0.2
4,720,741	+		Echvi_3941	0.38	-0.2
4,720,741	+		Echvi_3941	0.38	-0.7
4,720,742	-		Echvi_3941	0.38	+1.7
4,720,742	-		Echvi_3941	0.38	+2.2
4,720,742	-		Echvi_3941	0.38	+0.8
4,720,829	+		Echvi_3941	0.46	-1.0
4,720,830	-		Echvi_3941	0.46	-1.7
4,720,854	+		Echvi_3941	0.49	+0.7
4,720,855	-		Echvi_3941	0.49	-1.1
4,720,868	+		Echvi_3941	0.50	-0.3
4,720,888	-		Echvi_3941	0.52	-0.1
4,720,936	+		Echvi_3941	0.56	-1.5
4,720,942	+		Echvi_3941	0.57	+2.4
4,720,943	-		Echvi_3941	0.57	-0.9
4,720,943	-		Echvi_3941	0.57	-0.3
4,721,008	+		Echvi_3941	0.63	+0.6
4,721,008	+		Echvi_3941	0.63	-0.7
4,721,008	+		Echvi_3941	0.63	-0.8
4,721,011	-		Echvi_3941	0.64	+0.6
4,721,011	-		Echvi_3941	0.64	+0.4
4,721,106	-		Echvi_3941	0.73	+0.9
4,721,130	+		Echvi_3941	0.75	+0.7
4,721,131	-		Echvi_3941	0.75	-0.9
4,721,194	+		Echvi_3941	0.81	+0.0
4,721,215	+		Echvi_3941	0.83	-0.8
4,721,215	+		Echvi_3941	0.83	-0.2
4,721,288	-				+1.0
4,721,328	+				-0.1
4,721,329	-				-0.8
4,721,352	-				-0.1
4,721,383	+				-0.8
4,721,383	+				-1.1
4,721,384	-				-0.3
4,721,384	-				-1.4
4,721,387	-				+0.7
4,721,404	+				+1.9
4,721,405	-				+0.3
4,721,443	+				+0.7
4,721,444	-				-1.8
4,721,501	-		Echvi_3942	0.12	-1.0
4,721,584	+		Echvi_3942	0.22	-1.3
4,721,585	-		Echvi_3942	0.23	+0.7
4,721,655	+		Echvi_3942	0.32	+0.5
4,721,686	+		Echvi_3942	0.36	-0.6
4,721,722	-		Echvi_3942	0.40	+1.1
4,721,843	+		Echvi_3942	0.56	+0.4
4,721,907	+		Echvi_3942	0.64	+1.2
4,721,907	+		Echvi_3942	0.64	+0.2
4,721,908	-		Echvi_3942	0.65	-1.9
4,721,908	-		Echvi_3942	0.65	-0.7
4,721,913	+		Echvi_3942	0.65	+1.0
4,721,913	+		Echvi_3942	0.65	+0.8
4,721,914	-		Echvi_3942	0.65	+0.1
4,721,929	+		Echvi_3942	0.67	+0.8
4,721,930	-		Echvi_3942	0.67	+0.1
4,721,943	-		Echvi_3942	0.69	+0.5
4,721,990	+		Echvi_3942	0.75	-2.1
4,721,990	+		Echvi_3942	0.75	+1.0
4,722,067	+		Echvi_3942	0.85	+1.5
4,722,076	-		Echvi_3942	0.86	+1.0
4,722,177	+				-0.9
4,722,177	+				-0.7
4,722,178	-				+0.5
4,722,178	-				-0.4
4,722,286	+				-0.3
4,722,287	-				+0.4
4,722,376	+				+0.1
4,722,384	+				-1.4
4,722,384	+				+0.1
4,722,401	+				-1.8
4,722,460	-				+0.7
4,722,468	+				-0.6
4,722,473	+				+0.1
4,722,473	+				-1.1
4,722,474	-				-1.0
4,722,480	-				-0.6
4,722,480	-				+0.3
4,722,496	-				-0.6
4,722,536	+				-1.1
4,722,537	-				+0.1
4,722,544	-				-0.0
4,722,575	+				+0.6
4,722,752	-		Echvi_3943	0.12	-0.3
4,722,752	-		Echvi_3943	0.12	-0.3
4,722,754	-		Echvi_3943	0.12	+0.3
4,722,774	+		Echvi_3943	0.13	+0.9
4,722,774	+		Echvi_3943	0.13	-0.1
4,722,879	-		Echvi_3943	0.19	-0.2
4,722,997	+		Echvi_3943	0.26	-1.7
4,722,997	+		Echvi_3943	0.26	+0.5
4,723,037	+		Echvi_3943	0.28	-0.6
4,723,037	+		Echvi_3943	0.28	+2.0
4,723,037	+		Echvi_3943	0.28	-0.6