Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3692

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
4,397,188	-				-0.2
4,397,309	-				-1.6
4,397,312	+				+0.2
4,397,392	+				-0.1
4,397,493	+				+0.0
4,397,577	-		Echvi_3691	0.22	-0.4
4,397,620	-		Echvi_3691	0.30	+0.1
4,397,622	-		Echvi_3691	0.30	-2.7
4,397,695	+		Echvi_3691	0.43	-0.8
4,397,697	+		Echvi_3691	0.43	+1.6
4,397,697	+		Echvi_3691	0.43	+0.9
4,397,697	+		Echvi_3691	0.43	-0.5
4,397,697	+		Echvi_3691	0.43	+0.5
4,397,697	+		Echvi_3691	0.43	-0.8
4,397,697	+		Echvi_3691	0.43	+0.2
4,397,698	-		Echvi_3691	0.43	-0.6
4,397,698	-		Echvi_3691	0.43	+0.7
4,397,724	+		Echvi_3691	0.48	-2.3
4,397,724	+		Echvi_3691	0.48	+0.7
4,397,859	+		Echvi_3691	0.71	+0.9
4,397,860	-		Echvi_3691	0.71	-0.5
4,397,860	-		Echvi_3691	0.71	+0.2
4,397,994	+				-0.9
4,398,002	-				-0.6
4,398,058	-				-0.1
4,398,069	+				-0.3
4,398,069	+				-0.2
4,398,116	+				+0.0
4,398,184	-				+0.4
4,398,204	-				-1.6
4,398,205	+				+0.3
4,398,206	-				+0.4
4,398,211	+				+0.5
4,398,383	+		Echvi_3692	0.15	-1.2
4,398,383	+		Echvi_3692	0.15	-0.2
4,398,383	+		Echvi_3692	0.15	-1.7
4,398,384	-		Echvi_3692	0.15	-1.6
4,398,384	-		Echvi_3692	0.15	-0.1
4,398,387	-		Echvi_3692	0.15	+0.3
4,398,597	+		Echvi_3692	0.30	-0.7
4,398,813	-		Echvi_3692	0.45	+0.1
4,398,813	-		Echvi_3692	0.45	-0.2
4,398,902	+		Echvi_3692	0.51	-0.4
4,398,902	+		Echvi_3692	0.51	+2.8
4,398,902	+		Echvi_3692	0.51	+0.5
4,398,902	+		Echvi_3692	0.51	-1.3
4,398,903	-		Echvi_3692	0.52	-1.5
4,398,932	+		Echvi_3692	0.54	-0.7
4,399,063	-		Echvi_3692	0.63	+0.9
4,399,136	+		Echvi_3692	0.68	-0.8
4,399,247	+		Echvi_3692	0.76	-0.4
4,399,248	-		Echvi_3692	0.76	-0.2
4,399,248	-		Echvi_3692	0.76	+0.0
4,399,251	-		Echvi_3692	0.76	+0.0
4,399,521	-				+0.5
4,399,527	-				+0.3
4,399,636	-				+2.3
4,399,636	-				-0.7
4,399,653	+				+0.2
4,399,726	+				-0.3
4,399,749	+				-0.5
4,399,749	+				+0.6
4,399,788	+				+0.3
4,399,878	+		Echvi_3693	0.12	+0.0
4,399,881	+		Echvi_3693	0.12	-0.2
4,399,881	+		Echvi_3693	0.12	-1.3
4,399,882	-		Echvi_3693	0.12	-2.2
4,399,882	-		Echvi_3693	0.12	-0.5
4,399,882	-		Echvi_3693	0.12	-1.3
4,399,882	-		Echvi_3693	0.12	-0.4
4,399,882	-		Echvi_3693	0.12	+0.8
4,399,883	+		Echvi_3693	0.12	-0.4
4,399,884	-		Echvi_3693	0.12	-0.3
4,399,884	-		Echvi_3693	0.12	+1.3
4,399,884	-		Echvi_3693	0.12	-0.2
4,399,884	-		Echvi_3693	0.12	-0.9
4,399,899	+		Echvi_3693	0.13	+0.0
4,399,966	+		Echvi_3693	0.15	+0.0
4,399,978	+		Echvi_3693	0.16	+1.4
4,399,999	-		Echvi_3693	0.17	+0.2
4,400,034	+		Echvi_3693	0.18	+1.1
4,400,037	+		Echvi_3693	0.18	+0.2
4,400,064	-		Echvi_3693	0.19	-1.0
4,400,101	-		Echvi_3693	0.21	-1.7
4,400,101	-		Echvi_3693	0.21	+0.6
4,400,107	+		Echvi_3693	0.21	-0.7
4,400,107	+		Echvi_3693	0.21	+1.5
4,400,132	-		Echvi_3693	0.22	-0.7
4,400,158	+		Echvi_3693	0.23	-0.1
4,400,218	+		Echvi_3693	0.25	+0.7
4,400,219	-		Echvi_3693	0.25	+0.1
4,400,250	+		Echvi_3693	0.27	+1.1
4,400,251	-		Echvi_3693	0.27	-1.2
4,400,260	+		Echvi_3693	0.27	+1.4
4,400,260	+		Echvi_3693	0.27	+0.5
4,400,304	+		Echvi_3693	0.29	+0.8
4,400,305	-		Echvi_3693	0.29	-1.2
4,400,337	+		Echvi_3693	0.30	-0.2
4,400,337	+		Echvi_3693	0.30	-0.4
4,400,338	-		Echvi_3693	0.30	-0.4
4,400,338	-		Echvi_3693	0.30	+0.3
4,400,338	-		Echvi_3693	0.30	+0.5
4,400,416	+		Echvi_3693	0.33	+1.9
4,400,419	-		Echvi_3693	0.33	-0.7
4,400,419	-		Echvi_3693	0.33	+0.4
4,400,419	-		Echvi_3693	0.33	+0.1
4,400,473	+		Echvi_3693	0.36	+0.0
4,400,500	-		Echvi_3693	0.37	-0.5
4,400,500	-		Echvi_3693	0.37	+2.8
4,400,500	-		Echvi_3693	0.37	+0.6
4,400,561	+		Echvi_3693	0.39	-1.2
4,400,561	+		Echvi_3693	0.39	+0.8
4,400,561	+		Echvi_3693	0.39	-0.4
4,400,561	+		Echvi_3693	0.39	+0.4
4,400,561	+		Echvi_3693	0.39	-1.0
4,400,561	+		Echvi_3693	0.39	-0.3