Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3638

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
4,320,560	-				-2.0
4,320,562	+				-0.9
4,320,563	-				+1.2
4,320,563	-				+0.2
4,320,647	+		Echvi_3637	0.15	+0.1
4,320,648	-		Echvi_3637	0.15	-0.0
4,320,715	-		Echvi_3637	0.22	-0.0
4,320,809	-		Echvi_3637	0.32	+0.5
4,320,844	+		Echvi_3637	0.35	+0.7
4,320,844	+		Echvi_3637	0.35	-1.2
4,320,845	-		Echvi_3637	0.35	-0.7
4,320,867	-		Echvi_3637	0.38	+0.3
4,320,877	+		Echvi_3637	0.39	+1.7
4,321,008	+		Echvi_3637	0.53	-0.4
4,321,195	-		Echvi_3637	0.72	-1.2
4,321,225	-		Echvi_3637	0.75	+0.3
4,321,257	+		Echvi_3637	0.79	-0.9
4,321,257	+		Echvi_3637	0.79	-0.0
4,321,257	+		Echvi_3637	0.79	+0.8
4,321,258	-		Echvi_3637	0.79	+2.6
4,321,292	-		Echvi_3637	0.82	+1.6
4,321,298	-		Echvi_3637	0.83	+0.4
4,321,452	+				-0.7
4,321,480	-				-0.4
4,321,481	+				+2.6
4,321,482	-				-1.7
4,321,482	-				-1.4
4,321,482	-				-0.6
4,321,482	-				+0.6
4,321,485	-				-0.3
4,321,542	+				+1.1
4,321,543	-				+0.5
4,321,543	-				+0.6
4,321,547	-				-1.3
4,321,547	-				-1.3
4,321,563	+				+0.3
4,321,574	+				-2.0
4,321,576	+				-0.5
4,321,577	-				+0.3
4,321,746	-				-0.9
4,321,847	+		Echvi_3638	0.11	-0.0
4,321,907	-		Echvi_3638	0.13	-2.2
4,321,907	-		Echvi_3638	0.13	-0.7
4,321,999	+		Echvi_3638	0.17	-1.9
4,322,000	-		Echvi_3638	0.17	-1.6
4,322,233	+		Echvi_3638	0.25	+0.4
4,322,234	-		Echvi_3638	0.25	-0.2
4,322,235	+		Echvi_3638	0.25	+1.6
4,322,235	+		Echvi_3638	0.25	-0.4
4,322,311	-		Echvi_3638	0.28	+0.3
4,322,311	-		Echvi_3638	0.28	-0.3
4,322,407	+		Echvi_3638	0.32	-1.7
4,322,407	+		Echvi_3638	0.32	+0.6
4,322,407	+		Echvi_3638	0.32	-0.2
4,322,408	-		Echvi_3638	0.32	+0.2
4,322,411	+		Echvi_3638	0.32	-0.9
4,322,411	+		Echvi_3638	0.32	-0.0
4,322,411	+		Echvi_3638	0.32	-0.5
4,322,412	-		Echvi_3638	0.32	+0.9
4,322,412	-		Echvi_3638	0.32	-2.8
4,322,412	-		Echvi_3638	0.32	-0.2
4,322,415	+		Echvi_3638	0.32	+0.8
4,322,521	+		Echvi_3638	0.36	-1.3
4,322,521	+		Echvi_3638	0.36	-0.1
4,322,521	+		Echvi_3638	0.36	-1.3
4,322,521	+		Echvi_3638	0.36	-0.7
4,322,521	+		Echvi_3638	0.36	-0.5
4,322,522	-		Echvi_3638	0.36	-1.7
4,322,522	-		Echvi_3638	0.36	+0.3
4,322,578	+		Echvi_3638	0.38	+1.6
4,322,583	-		Echvi_3638	0.38	-1.0
4,322,689	+		Echvi_3638	0.42	-0.7
4,322,733	-		Echvi_3638	0.44	-0.6
4,322,816	+		Echvi_3638	0.47	-0.8
4,322,838	-		Echvi_3638	0.48	-2.6
4,322,868	+				-0.4
4,322,907	-		Echvi_3638	0.50	+0.4
4,322,922	-		Echvi_3638	0.51	-0.9
4,322,922	-		Echvi_3638	0.51	+0.9
4,322,932	-		Echvi_3638	0.51	+1.2
4,322,946	-		Echvi_3638	0.52	-1.6
4,323,062	-		Echvi_3638	0.56	-0.3
4,323,492	+		Echvi_3638	0.72	+3.2
4,323,671	+		Echvi_3638	0.78	-1.3
4,323,686	+		Echvi_3638	0.79	-1.2
4,323,725	+		Echvi_3638	0.80	+0.6
4,323,730	+		Echvi_3638	0.81	+0.4
4,323,730	+		Echvi_3638	0.81	+0.3
4,323,764	-		Echvi_3638	0.82	+2.6
4,323,998	-				+1.0
4,324,054	-				-0.7
4,324,219	-				-0.4
4,324,232	+				-0.1
4,324,272	-				+0.6
4,324,276	+				+0.3
4,324,276	+				-0.2
4,324,277	-				-2.9
4,324,277	-				+1.6
4,324,277	-				+0.0
4,324,277	-				+0.5
4,324,278	+				-2.6
4,324,278	+				-1.5
4,324,279	-				+0.4
4,324,279	-				-0.9
4,324,283	+				+1.0
4,324,330	+				+0.6
4,324,331	-				+0.9
4,324,432	-		Echvi_3639	0.17	+0.3
4,324,520	+		Echvi_3639	0.25	+1.2
4,324,521	-		Echvi_3639	0.25	+0.6
4,324,568	+		Echvi_3639	0.30	+3.2
4,324,815	+		Echvi_3639	0.53	-1.1
4,325,022	+		Echvi_3639	0.73	-0.7
4,325,045	-		Echvi_3639	0.75	-0.6
4,325,045	-		Echvi_3639	0.75	-1.0
4,325,066	+		Echvi_3639	0.77	-0.7
4,325,066	+		Echvi_3639	0.77	-1.0
4,325,091	+		Echvi_3639	0.80	-1.0
4,325,092	-		Echvi_3639	0.80	-0.4
4,325,095	+		Echvi_3639	0.80	+1.6
4,325,095	+		Echvi_3639	0.80	-1.2
4,325,128	+		Echvi_3639	0.83	-1.2
4,325,212	+				-1.4
4,325,212	+				+3.6
4,325,213	-				-2.3
4,325,213	-				-1.2