Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3595

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
4,265,408	-				-0.9
4,265,408	-				-1.1
4,265,408	-				-1.2
4,265,514	-		Echvi_3593	0.15	-0.8
4,265,528	+		Echvi_3593	0.17	+0.3
4,265,528	+		Echvi_3593	0.17	-0.4
4,265,528	+		Echvi_3593	0.17	+0.3
4,265,528	+		Echvi_3593	0.17	-0.4
4,265,528	+		Echvi_3593	0.17	-0.4
4,265,528	+		Echvi_3593	0.17	-1.5
4,265,528	+		Echvi_3593	0.17	-0.0
4,265,529	-		Echvi_3593	0.17	+0.2
4,265,529	-		Echvi_3593	0.17	-1.5
4,265,530	+		Echvi_3593	0.17	+0.4
4,265,530	+		Echvi_3593	0.17	-0.2
4,265,530	+		Echvi_3593	0.17	-0.2
4,265,530	+		Echvi_3593	0.17	+0.8
4,265,531	-		Echvi_3593	0.17	-0.5
4,265,577	+		Echvi_3593	0.24	-2.1
4,265,577	+		Echvi_3593	0.24	+1.8
4,265,578	-		Echvi_3593	0.24	+0.1
4,265,635	+		Echvi_3593	0.32	-0.3
4,265,648	-		Echvi_3593	0.34	+0.7
4,265,648	-		Echvi_3593	0.34	-1.0
4,265,648	-		Echvi_3593	0.34	+0.2
4,265,673	+		Echvi_3593	0.38	+0.2
4,265,680	-		Echvi_3593	0.39	+1.6
4,265,703	-		Echvi_3593	0.42	+0.2
4,265,727	-		Echvi_3593	0.46	-0.1
4,265,766	-		Echvi_3593	0.51	-1.4
4,265,792	+		Echvi_3593	0.55	+0.7
4,265,792	+		Echvi_3593	0.55	+0.2
4,265,874	+		Echvi_3593	0.67	-1.4
4,265,893	+		Echvi_3593	0.70	-1.4
4,265,894	-		Echvi_3593	0.70	+3.1
4,265,894	-		Echvi_3593	0.70	-1.4
4,265,894	-		Echvi_3593	0.70	+0.1
4,266,031	-		Echvi_3593	0.90	-2.0
4,266,108	-				+1.6
4,266,149	-		Echvi_3594	0.28	-0.1
4,266,195	+		Echvi_3594	0.57	+0.1
4,266,284	+				-0.8
4,266,284	+				+0.8
4,266,285	-				-0.0
4,266,286	+				-0.9
4,266,286	+				+1.1
4,266,287	-				+0.7
4,266,287	-				-1.9
4,266,287	-				+1.1
4,266,291	+				-2.5
4,266,297	+				-0.9
4,266,307	-		Echvi_3595	0.10	-1.2
4,266,317	+		Echvi_3595	0.13	-0.8
4,266,342	+		Echvi_3595	0.18	+2.2
4,266,407	+		Echvi_3595	0.33	-1.0
4,266,453	+		Echvi_3595	0.43	-0.0
4,266,496	-		Echvi_3595	0.53	+2.0
4,266,593	+		Echvi_3595	0.75	+0.5
4,266,598	-		Echvi_3595	0.76	-1.0
4,266,648	+		Echvi_3595	0.87	+1.7
4,266,649	-		Echvi_3595	0.87	+2.6
4,266,691	+				-0.5
4,266,692	-				-0.1
4,266,692	-				+0.6
4,266,699	-				-0.2
4,266,699	-				+0.3
4,266,711	+				+1.6
4,266,874	+		Echvi_3596	0.38	-0.1
4,266,874	+		Echvi_3596	0.38	-0.3
4,266,875	-		Echvi_3596	0.38	-0.1
4,266,895	+		Echvi_3596	0.43	+0.8
4,266,896	-		Echvi_3596	0.43	-1.6
4,266,914	-		Echvi_3596	0.48	+1.2
4,266,914	-		Echvi_3596	0.48	-0.4
4,266,915	+		Echvi_3596	0.48	-1.2
4,266,915	+		Echvi_3596	0.48	+0.9
4,266,916	-		Echvi_3596	0.48	-0.2
4,266,916	-		Echvi_3596	0.48	-1.3
4,266,964	+		Echvi_3596	0.59	+3.2
4,266,965	-		Echvi_3596	0.59	+2.6
4,266,965	-		Echvi_3596	0.59	-1.3
4,267,003	+		Echvi_3596	0.68	-0.5
4,267,004	-		Echvi_3596	0.69	-0.0
4,267,008	+		Echvi_3596	0.69	-2.3
4,267,030	+		Echvi_3596	0.75	-1.0
4,267,030	+		Echvi_3596	0.75	+1.0
4,267,030	+		Echvi_3596	0.75	+0.3
4,267,030	+		Echvi_3596	0.75	-0.3
4,267,030	+		Echvi_3596	0.75	-2.7
4,267,031	-		Echvi_3596	0.75	+0.0
4,267,067	+		Echvi_3596	0.83	-1.1
4,267,067	+		Echvi_3596	0.83	+0.5
4,267,068	-		Echvi_3596	0.83	+1.8
4,267,103	+				-1.0
4,267,156	+				+0.1
4,267,173	-				-0.4
4,267,175	+				-0.2
4,267,175	+				-1.3
4,267,176	-				-0.1
4,267,373	+				-0.9
4,267,390	-				+0.1
4,267,390	-				-0.0
4,267,390	-				-0.9
4,267,484	-		Echvi_3597	0.11	+0.8
4,267,546	+		Echvi_3597	0.14	-0.4
4,267,550	-		Echvi_3597	0.14	-0.6
4,267,573	-		Echvi_3597	0.16	-0.4
4,267,585	+		Echvi_3597	0.16	+1.8
4,267,585	+		Echvi_3597	0.16	+1.6