Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3344

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
3,947,016	+		Echvi_3343	0.41	+2.2
3,947,016	+		Echvi_3343	0.41	-0.3
3,947,017	-		Echvi_3343	0.41	+0.5
3,947,059	+		Echvi_3343	0.44	-1.0
3,947,131	+		Echvi_3343	0.48	+0.8
3,947,131	+		Echvi_3343	0.48	-0.3
3,947,198	-		Echvi_3343	0.52	+0.2
3,947,198	-		Echvi_3343	0.52	-1.3
3,947,198	-		Echvi_3343	0.52	-0.3
3,947,226	-		Echvi_3343	0.54	-3.4
3,947,282	+		Echvi_3343	0.57	-0.7
3,947,302	+		Echvi_3343	0.58	+1.0
3,947,302	+				-0.4
3,947,302	+		Echvi_3343	0.58	+0.8
3,947,303	-		Echvi_3343	0.58	+0.4
3,947,303	-				+1.9
3,947,351	-		Echvi_3343	0.61	-1.0
3,947,354	+		Echvi_3343	0.61	+0.3
3,947,364	+		Echvi_3343	0.62	-1.3
3,947,370	+		Echvi_3343	0.62	-0.3
3,947,381	-		Echvi_3343	0.63	-0.4
3,947,562	+		Echvi_3343	0.74	+0.3
3,947,582	-		Echvi_3343	0.75	-0.3
3,947,582	-		Echvi_3343	0.75	-0.1
3,947,680	-		Echvi_3343	0.81	+0.6
3,947,695	-		Echvi_3343	0.81	+0.7
3,947,780	+		Echvi_3343	0.86	-2.2
3,947,781	-		Echvi_3343	0.87	-1.8
3,947,805	-		Echvi_3343	0.88	+0.2
3,947,805	-		Echvi_3343	0.88	-1.0
3,947,837	-		Echvi_3343	0.90	-1.2
3,947,860	-				-1.2
3,947,877	+				-0.2
3,947,877	+				+0.2
3,947,877	+				-1.0
3,947,949	+				-1.0
3,947,949	+				-1.0
3,947,950	-				+1.2
3,947,953	+				+0.2
3,947,988	+				-0.0
3,948,006	+				-0.9
3,948,006	+				-0.4
3,948,042	+				-0.7
3,948,154	+		Echvi_3344	0.25	-1.3
3,948,155	-		Echvi_3344	0.25	-1.4
3,948,162	+		Echvi_3344	0.27	+0.3
3,948,162	+		Echvi_3344	0.27	-0.1
3,948,163	-		Echvi_3344	0.27	-1.3
3,948,169	+		Echvi_3344	0.28	-2.2
3,948,169	+		Echvi_3344	0.28	+0.2
3,948,172	+		Echvi_3344	0.28	+0.6
3,948,172	+		Echvi_3344	0.28	-1.1
3,948,173	-		Echvi_3344	0.29	-1.2
3,948,348	+		Echvi_3344	0.60	+1.1
3,948,349	-		Echvi_3344	0.60	-0.4
3,948,349	-		Echvi_3344	0.60	-0.1
3,948,349	-		Echvi_3344	0.60	-0.4
3,948,429	-		Echvi_3344	0.74	-1.5
3,948,429	-		Echvi_3344	0.74	-1.6
3,948,434	-		Echvi_3344	0.75	-0.8
3,948,480	+		Echvi_3344	0.83	-0.7
3,948,481	-		Echvi_3344	0.83	+1.1
3,948,481	-		Echvi_3344	0.83	-0.1
3,948,515	-		Echvi_3344	0.89	-0.2
3,948,563	-				-1.8
3,948,563	-				+2.9
3,948,584	-				+1.0
3,948,593	-				-0.1
3,948,616	-				-1.9
3,948,631	+				-0.1
3,948,660	-				+0.2
3,948,688	+				-0.4
3,948,724	+				-0.4
3,948,744	+				+0.7
3,948,744	+				-0.1
3,948,744	+				+0.6
3,948,755	+				-2.4
3,948,784	-				-0.3
3,948,859	+		Echvi_3345	0.14	+0.7
3,948,859	+		Echvi_3345	0.14	+0.8
3,948,915	-		Echvi_3345	0.19	+0.6
3,948,970	+		Echvi_3345	0.25	+0.8
3,948,970	+		Echvi_3345	0.25	-3.2
3,948,975	+		Echvi_3345	0.25	+0.3
3,948,975	+		Echvi_3345	0.25	-0.0
3,949,000	+		Echvi_3345	0.28	-0.5
3,949,000	+		Echvi_3345	0.28	+1.3
3,949,000	+		Echvi_3345	0.28	-0.0
3,949,000	+		Echvi_3345	0.28	-0.0
3,949,001	-		Echvi_3345	0.28	-3.7
3,949,001	-		Echvi_3345	0.28	-0.0
3,949,001	-		Echvi_3345	0.28	-0.3
3,949,043	+		Echvi_3345	0.32	-1.0
3,949,106	-		Echvi_3345	0.38	+1.6
3,949,141	+		Echvi_3345	0.42	+0.2
3,949,141	+		Echvi_3345	0.42	-0.2
3,949,186	+		Echvi_3345	0.46	+0.8
3,949,186	+		Echvi_3345	0.46	+1.7
3,949,186	+		Echvi_3345	0.46	-0.5
3,949,186	+		Echvi_3345	0.46	+0.7
3,949,186	+		Echvi_3345	0.46	-0.9
3,949,187	-		Echvi_3345	0.46	+0.4
3,949,258	+		Echvi_3345	0.53	+1.0
3,949,335	-		Echvi_3345	0.61	-0.3
3,949,376	+		Echvi_3345	0.65	+0.6
3,949,376	+		Echvi_3345	0.65	-1.0
3,949,376	+		Echvi_3345	0.65	+1.1
3,949,376	+		Echvi_3345	0.65	+0.7
3,949,377	-		Echvi_3345	0.65	+0.3
3,949,465	-		Echvi_3345	0.74	-0.4
3,949,480	+		Echvi_3345	0.75	-0.9
3,949,530	-		Echvi_3345	0.80	-0.7
3,949,530	-		Echvi_3345	0.80	-0.8
3,949,531	+		Echvi_3345	0.80	-0.4
3,949,531	+		Echvi_3345	0.80	-0.1
3,949,531	+		Echvi_3345	0.80	-0.3
3,949,531	+		Echvi_3345	0.80	-0.4
3,949,531	+		Echvi_3345	0.80	+0.0
3,949,531	+		Echvi_3345	0.80	-1.0
3,949,531	+		Echvi_3345	0.80	+0.6
3,949,531	+		Echvi_3345	0.80	+2.6
3,949,531	+		Echvi_3345	0.80	-0.1
3,949,531	+		Echvi_3345	0.80	-0.8
3,949,532	-		Echvi_3345	0.80	+0.3
3,949,532	-		Echvi_3345	0.80	-0.9
3,949,532	-		Echvi_3345	0.80	-1.5
3,949,545	+		Echvi_3345	0.82	-0.1
3,949,545	+		Echvi_3345	0.82	-1.8
3,949,546	-		Echvi_3345	0.82	-0.8
3,949,546	-		Echvi_3345	0.82	-1.0
3,949,546	-		Echvi_3345	0.82	-0.3
3,949,546	-		Echvi_3345	0.82	-0.8
3,949,554	-		Echvi_3345	0.83	-0.4
3,949,555	+		Echvi_3345	0.83	-0.4
3,949,555	+		Echvi_3345	0.83	+1.6
3,949,556	-		Echvi_3345	0.83	-0.4