Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3227

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
3,824,831	+		Echvi_3225	0.58	-1.4
3,824,832	-		Echvi_3225	0.58	-0.2
3,824,846	+		Echvi_3225	0.63	+0.5
3,824,847	-		Echvi_3225	0.63	-0.4
3,824,895	+		Echvi_3225	0.78	-0.7
3,824,895	+		Echvi_3225	0.78	+0.6
3,824,895	+		Echvi_3225	0.78	-2.0
3,824,909	-		Echvi_3225	0.83	+0.3
3,824,925	-		Echvi_3225	0.88	-0.4
3,824,954	+				+0.6
3,824,954	+				+0.3
3,824,954	+				+0.2
3,824,959	+				+0.7
3,824,984	-				+0.6
3,825,026	-				+0.6
3,825,026	-				+0.6
3,825,039	+				-1.3
3,825,099	-				+0.8
3,825,332	+		Echvi_3226	0.27	+0.5
3,825,333	-		Echvi_3226	0.28	+0.7
3,825,333	-		Echvi_3226	0.28	-0.7
3,825,369	-		Echvi_3226	0.33	-1.0
3,825,401	+		Echvi_3226	0.38	-0.3
3,825,401	+		Echvi_3226	0.38	-1.4
3,825,401	+		Echvi_3226	0.38	-0.4
3,825,402	-		Echvi_3226	0.38	-0.7
3,825,496	+		Echvi_3226	0.53	+1.4
3,825,497	-		Echvi_3226	0.53	-0.2
3,825,506	+		Echvi_3226	0.55	+0.6
3,825,506	+		Echvi_3226	0.55	-0.5
3,825,506	+		Echvi_3226	0.55	-0.7
3,825,507	-		Echvi_3226	0.55	+1.8
3,825,507	-		Echvi_3226	0.55	+0.2
3,825,572	+		Echvi_3226	0.65	-1.3
3,825,572	+		Echvi_3226	0.65	-0.6
3,825,644	+		Echvi_3226	0.76	+0.2
3,825,645	-		Echvi_3226	0.77	-1.0
3,825,665	-		Echvi_3226	0.80	+0.5
3,825,721	+		Echvi_3226	0.89	+0.2
3,825,722	-		Echvi_3226	0.89	+0.0
3,825,722	-		Echvi_3226	0.89	-1.3
3,825,782	+				+0.7
3,825,783	-				+0.0
3,825,785	+				+0.1
3,825,899	+		Echvi_3227	0.21	-0.3
3,825,899	+		Echvi_3227	0.21	-0.6
3,825,899	+		Echvi_3227	0.21	-0.1
3,825,900	-		Echvi_3227	0.21	-0.2
3,825,900	-		Echvi_3227	0.21	-1.4
3,825,900	-		Echvi_3227	0.21	+0.4
3,825,900	-		Echvi_3227	0.21	-0.4
3,825,900	-		Echvi_3227	0.21	-0.7
3,825,900	-		Echvi_3227	0.21	-0.6
3,825,957	-		Echvi_3227	0.34	-1.0
3,825,971	+		Echvi_3227	0.37	+0.1
3,825,971	+		Echvi_3227	0.37	-0.6
3,825,971	+		Echvi_3227	0.37	-0.7
3,825,971	+		Echvi_3227	0.37	-1.5
3,825,972	-		Echvi_3227	0.37	-0.5
3,825,972	-		Echvi_3227	0.37	-0.8
3,826,106	-		Echvi_3227	0.67	+0.4
3,826,215	+				-1.7
3,826,216	-				-0.8
3,826,216	-				+1.8
3,826,240	-				-0.1
3,826,240	-				+0.2
3,826,254	+				+0.7
3,826,260	+				+0.7
3,826,260	+				-0.5
3,826,260	+				-1.4
3,826,261	-				+1.2
3,826,262	+				+0.3
3,826,262	+				-0.7
3,826,263	-				+1.2
3,826,301	+				-1.4
3,826,345	+		Echvi_3228	0.11	+0.1
3,826,396	+		Echvi_3228	0.18	-0.7
3,826,456	-		Echvi_3228	0.26	-0.7
3,826,456	-		Echvi_3228	0.26	+0.0
3,826,458	-		Echvi_3228	0.26	+0.8
3,826,458	-		Echvi_3228	0.26	-1.5
3,826,458	-		Echvi_3228	0.26	+0.0
3,826,465	-		Echvi_3228	0.27	-0.2
3,826,466	+		Echvi_3228	0.27	+1.0
3,826,466	+		Echvi_3228	0.27	+0.9
3,826,467	-		Echvi_3228	0.27	-0.1
3,826,579	+		Echvi_3228	0.42	-2.6
3,826,579	+		Echvi_3228	0.42	+0.3
3,826,765	+		Echvi_3228	0.66	+0.2
3,826,773	+		Echvi_3228	0.67	-0.9
3,826,796	-		Echvi_3228	0.70	-0.1
3,826,796	-		Echvi_3228	0.70	-0.7
3,826,806	+		Echvi_3228	0.71	-0.4
3,826,806	+		Echvi_3228	0.71	+0.1
3,826,919	+		Echvi_3228	0.86	-0.4
3,826,919	+		Echvi_3228	0.86	-0.4
3,826,919	+		Echvi_3228	0.86	-2.0
3,826,920	-		Echvi_3228	0.86	-0.1
3,826,926	+		Echvi_3228	0.87	-1.2
3,826,927	-		Echvi_3228	0.87	-0.4
3,826,955	-				+1.2
3,827,115	+				+0.2
3,827,116	-				-0.0
3,827,119	+				+0.0
3,827,119	+				-0.4
3,827,141	-				+0.3
3,827,183	-				+0.6
3,827,251	+				-0.2
3,827,251	+				-2.1
3,827,252	-				-0.3
3,827,253	+				-0.1
3,827,253	+				-0.3
3,827,253	+				+0.0
3,827,253	+				-0.8
3,827,253	+				+1.2
3,827,254	-				-0.6
3,827,254	-				+3.3