Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3134

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
3,747,753	-				+1.6
3,747,907	+				+0.0
3,747,907	+				+0.0
3,747,940	+				+0.5
3,747,951	+				+0.1
3,747,980	+				-2.5
3,747,980	+				-0.8
3,747,980	+				+1.2
3,747,981	-				-0.5
3,747,981	-				-2.3
3,747,982	+				+0.6
3,747,982	+				-0.2
3,747,983	-				+1.0
3,747,983	-				+2.6
3,747,983	-				-0.1
3,747,987	+				-0.6
3,747,988	-				-0.2
3,748,010	+				-2.3
3,748,029	-				+0.0
3,748,151	-		Echvi_3134	0.23	+0.5
3,748,181	+		Echvi_3134	0.28	-1.0
3,748,256	+		Echvi_3134	0.39	+0.0
3,748,257	-		Echvi_3134	0.39	+0.2
3,748,352	-		Echvi_3134	0.52	+3.0
3,748,373	+		Echvi_3134	0.55	+0.0
3,748,373	+		Echvi_3134	0.55	-1.1
3,748,419	+		Echvi_3134	0.62	+0.6
3,748,419	+		Echvi_3134	0.62	+1.1
3,748,421	+		Echvi_3134	0.62	+0.0
3,748,421	+		Echvi_3134	0.62	+0.0
3,748,497	+		Echvi_3134	0.73	+1.2
3,748,498	-		Echvi_3134	0.73	-0.4
3,748,498	-		Echvi_3134	0.73	+0.5
3,748,509	+		Echvi_3134	0.75	+0.3
3,748,509	+		Echvi_3134	0.75	+1.3
3,748,510	-		Echvi_3134	0.75	+0.5
3,748,543	+		Echvi_3134	0.80	-0.6
3,748,544	-		Echvi_3134	0.80	+1.9
3,748,546	-		Echvi_3134	0.80	+0.9
3,748,560	-		Echvi_3134	0.82	-0.2
3,748,563	+		Echvi_3134	0.83	+2.1
3,748,563	+		Echvi_3134	0.83	+1.8
3,748,596	-		Echvi_3134	0.87	+0.1
3,748,622	+				+0.1
3,748,622	+				+0.9
3,748,623	-				-0.9
3,748,717	-				+0.9
3,749,014	+				-0.3
3,749,014	+				+0.2
3,749,015	-				-1.4
3,749,020	+				+1.9
3,749,020	+				+0.2
3,749,021	-				+0.1
3,749,021	-				+0.5
3,749,032	-				+0.1
3,749,059	+				+0.0
3,749,062	-				+1.4
3,749,067	+				-0.1
3,749,068	-				+0.6
3,749,068	-				+0.5
3,749,068	-				-0.7
3,749,073	+				+1.0
3,749,073	+				+1.3
3,749,074	-				+0.8
3,749,074	-				+0.1
3,749,083	+				-1.8
3,749,136	+				-1.7
3,749,165	+				+0.1
3,749,166	-				-0.3
3,749,166	-				+1.9
3,749,166	-				+1.4
3,749,452	-		Echvi_3136	0.18	+0.8
3,749,452	-		Echvi_3136	0.18	+0.5
3,749,578	+		Echvi_3136	0.26	+0.0
3,749,610	+		Echvi_3136	0.28	-0.2
3,749,683	-		Echvi_3136	0.33	-0.3